RNA–Protein interactions for RNA: ENST00000586568.1

CXXC1-206, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 866 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-206ENST00000586568 STARD3NLO95772 234 aa19.82■□□□□ 0.76
CXXC1-206ENST00000586568 EIF5P55010 431 aaKnown RBP19.82■□□□□ 0.76
CXXC1-206ENST00000586568 COL15A1P39059 1388 aa19.82■□□□□ 0.76
CXXC1-206ENST00000586568 GNAT3A8MTJ3 354 aa19.81■□□□□ 0.76
CXXC1-206ENST00000586568 U2SURPO15042 1029 aaKnown RBP19.81■□□□□ 0.76
CXXC1-206ENST00000586568 SERPINB2P05120 415 aa19.81■□□□□ 0.76
CXXC1-206ENST00000586568 CANXP27824 592 aaKnown RBP19.81■□□□□ 0.76
CXXC1-206ENST00000586568 TTC5Q8N0Z6 440 aa19.81■□□□□ 0.76
CXXC1-206ENST00000586568 ZNF496Q96IT1 587 aaPredicted RBP19.81■□□□□ 0.76
CXXC1-206ENST00000586568 KCPQ6ZWJ8 1503 aa19.81■□□□□ 0.76
CXXC1-206ENST00000586568 APLP1P51693 650 aa19.8■□□□□ 0.76
CXXC1-206ENST00000586568 ZNF790Q6PG37 636 aa19.8■□□□□ 0.76
CXXC1-206ENST00000586568 GAS2L2Q8NHY3 880 aa19.8■□□□□ 0.76
CXXC1-206ENST00000586568 RNF181Q9P0P0 153 aa19.8■□□□□ 0.76
CXXC1-206ENST00000586568 TJP1Q07157 1748 aa19.79■□□□□ 0.76
CXXC1-206ENST00000586568 TEFQ10587 303 aa19.79■□□□□ 0.76
CXXC1-206ENST00000586568 CNGB1Q14028 1251 aaPredicted RBP19.79■□□□□ 0.76
CXXC1-206ENST00000586568 IFFO2Q5TF58 517 aa19.79■□□□□ 0.76
CXXC1-206ENST00000586568 TEX13AQ9BXU3 409 aaPredicted RBP19.79■□□□□ 0.76
CXXC1-206ENST00000586568 N4BP2Q86UW6 1770 aaPredicted RBP19.79■□□□□ 0.76
CXXC1-206ENST00000586568 A0A087WZG4 1122 aa19.78■□□□□ 0.76
CXXC1-206ENST00000586568 DNAJC5GQ8N7S2 189 aa19.78■□□□□ 0.76
CXXC1-206ENST00000586568 RBM46Q8TBY0 533 aaKnown RBP19.78■□□□□ 0.76
CXXC1-206ENST00000586568 PHACTR3Q96KR7 559 aa19.77■□□□□ 0.76
CXXC1-206ENST00000586568 ADAMTS7Q9UKP4 1686 aa19.77■□□□□ 0.76
CXXC1-206ENST00000586568 SCN11AQ9UI33 1791 aa19.77■□□□□ 0.76
CXXC1-206ENST00000586568 KDM2BQ8NHM5 1336 aa19.76■□□□□ 0.75
CXXC1-206ENST00000586568 COL3A1P02461 1466 aaPredicted RBP19.76■□□□□ 0.75
CXXC1-206ENST00000586568 TTLL6Q8N841 843 aa19.76■□□□□ 0.75
CXXC1-206ENST00000586568 HEG1Q9ULI3 1381 aa19.75■□□□□ 0.75
CXXC1-206ENST00000586568 BICDL1Q6ZP65 573 aa19.75■□□□□ 0.75
CXXC1-206ENST00000586568 H0YIN7 160 aa19.74■□□□□ 0.75
CXXC1-206ENST00000586568 C2CD5Q86YS7 1000 aa19.74■□□□□ 0.75
CXXC1-206ENST00000586568 C16orf71Q8IYS4 520 aaPredicted RBP19.74■□□□□ 0.75
CXXC1-206ENST00000586568 RRAGCQ9HB90 399 aa19.74■□□□□ 0.75
CXXC1-206ENST00000586568 CEMIPQ8WUJ3 1361 aa19.73■□□□□ 0.75
CXXC1-206ENST00000586568 LMNB1P20700 586 aa19.73■□□□□ 0.75
CXXC1-206ENST00000586568 IL6STP40189 918 aaPredicted RBP19.73■□□□□ 0.75
CXXC1-206ENST00000586568 FSTL1Q12841 308 aa19.73■□□□□ 0.75
CXXC1-206ENST00000586568 TBC1D9BQ66K14 1250 aa19.73■□□□□ 0.75
CXXC1-206ENST00000586568 FMNL2Q96PY5 1086 aa19.73■□□□□ 0.75
CXXC1-206ENST00000586568 TBC1D2BQ9UPU7 963 aa19.73■□□□□ 0.75
CXXC1-206ENST00000586568 A1BGP04217 495 aa19.72■□□□□ 0.75
CXXC1-206ENST00000586568 PRKAR2BP31323 418 aa19.72■□□□□ 0.75
CXXC1-206ENST00000586568 PRELPP51888 382 aa19.72■□□□□ 0.75
CXXC1-206ENST00000586568 RASSF7Q02833 373 aa19.72■□□□□ 0.75
CXXC1-206ENST00000586568 CFAP53Q96M91 514 aa19.72■□□□□ 0.75
CXXC1-206ENST00000586568 BRIP1Q9BX63 1249 aa19.72■□□□□ 0.75
CXXC1-206ENST00000586568 RSPH6AQ9H0K4 717 aa19.72■□□□□ 0.75
CXXC1-206ENST00000586568 KCNQ3O43525 872 aa19.71■□□□□ 0.75
CXXC1-206ENST00000586568 ZC3H4Q9UPT8 1303 aaKnown RBP19.71■□□□□ 0.75
CXXC1-206ENST00000586568 BTBD11A6QL63 1104 aa19.7■□□□□ 0.74
CXXC1-206ENST00000586568 PDZRN3Q9UPQ7 1066 aa19.7■□□□□ 0.74
CXXC1-206ENST00000586568 NUDCQ9Y266 331 aa19.7■□□□□ 0.74
CXXC1-206ENST00000586568 CARMIL3Q8ND23 1372 aa19.7■□□□□ 0.74
CXXC1-206ENST00000586568 PRR5LQ6MZQ0 368 aa19.69■□□□□ 0.74
CXXC1-206ENST00000586568 ZNF330Q9Y3S2 320 aaPredicted RBP19.69■□□□□ 0.74
CXXC1-206ENST00000586568 GLTPD2A6NH11 291 aa19.68■□□□□ 0.74
CXXC1-206ENST00000586568 NFKBIEO00221 500 aa19.68■□□□□ 0.74
CXXC1-206ENST00000586568 CAMTA2O94983 1202 aa19.68■□□□□ 0.74
CXXC1-206ENST00000586568 PDE6BP35913 854 aa19.68■□□□□ 0.74
CXXC1-206ENST00000586568 USP16Q9Y5T5 823 aa19.68■□□□□ 0.74
CXXC1-206ENST00000586568 BRCA1P38398 1863 aaKnown RBP19.68■□□□□ 0.74
CXXC1-206ENST00000586568 PPP2R1AP30153 589 aa19.67■□□□□ 0.74
CXXC1-206ENST00000586568 NPM2Q86SE8 214 aaKnown RBP19.67■□□□□ 0.74
CXXC1-206ENST00000586568 SETDB2Q96T68 719 aa19.67■□□□□ 0.74
CXXC1-206ENST00000586568 U2AF1L5P0DN76 240 aaPredicted RBP19.66■□□□□ 0.74
CXXC1-206ENST00000586568 VEGFAP15692 232 aaPredicted RBP19.66■□□□□ 0.74
CXXC1-206ENST00000586568 U2AF1Q01081 240 aaKnown RBP eCLIP19.66■□□□□ 0.747e-6■■■■□ 20
CXXC1-206ENST00000586568 CCDC24Q8N4L8 307 aa19.66■□□□□ 0.74
CXXC1-206ENST00000586568 ZNF622Q969S3 477 aaKnown RBP eCLIP19.66■□□□□ 0.741e-8■□□□□ 11.3
CXXC1-206ENST00000586568 ARFGEF1Q9Y6D6 1849 aa19.65■□□□□ 0.74
CXXC1-206ENST00000586568 C21orf2O43822 256 aa19.64■□□□□ 0.73
CXXC1-206ENST00000586568 SNRPA1P09661 255 aaKnown RBP19.64■□□□□ 0.73
CXXC1-206ENST00000586568 HTRA3P83110 453 aa19.64■□□□□ 0.73
CXXC1-206ENST00000586568 MCM10Q7L590 875 aa19.64■□□□□ 0.73
CXXC1-206ENST00000586568 DZIP3Q86Y13 1208 aaKnown RBP19.64■□□□□ 0.73
CXXC1-206ENST00000586568 SMC1BQ8NDV3 1235 aa19.64■□□□□ 0.73
CXXC1-206ENST00000586568 RTF1Q92541 710 aaKnown RBP19.64■□□□□ 0.73
CXXC1-206ENST00000586568 NRXN2Q9P2S2 1712 aa19.64■□□□□ 0.73
CXXC1-206ENST00000586568 PRAMEF22A3QJZ6 481 aa19.63■□□□□ 0.73
CXXC1-206ENST00000586568 HTATSF1O43719 755 aaKnown RBP19.63■□□□□ 0.73
CXXC1-206ENST00000586568 CLEC4GQ6UXB4 293 aa19.63■□□□□ 0.73
CXXC1-206ENST00000586568 CNBD1Q8NA66 436 aa19.63■□□□□ 0.73
CXXC1-206ENST00000586568 SRGNP10124 158 aa19.62■□□□□ 0.73
CXXC1-206ENST00000586568 PIP4K2AP48426 406 aaPredicted RBP19.62■□□□□ 0.73
CXXC1-206ENST00000586568 KLRG1Q96E93 195 aa19.62■□□□□ 0.73
CXXC1-206ENST00000586568 UBR2Q8IWV8 1755 aa19.62■□□□□ 0.73
CXXC1-206ENST00000586568 POTECB2RU33 542 aa19.61■□□□□ 0.73
CXXC1-206ENST00000586568 STYK1Q6J9G0 422 aa19.61■□□□□ 0.73
CXXC1-206ENST00000586568 DPY19L2Q6NUT2 758 aa19.61■□□□□ 0.73
CXXC1-206ENST00000586568 JMYQ8N9B5 988 aa19.61■□□□□ 0.73
CXXC1-206ENST00000586568 CNKSR1Q969H4 720 aa19.61■□□□□ 0.73
CXXC1-206ENST00000586568 ZNF219Q9P2Y4 722 aaPredicted RBP19.61■□□□□ 0.73
CXXC1-206ENST00000586568 DCTN1Q14203 1278 aa19.6■□□□□ 0.73
CXXC1-206ENST00000586568 LTBP3Q9NS15 1303 aa19.59■□□□□ 0.73
CXXC1-206ENST00000586568 NBPF26B4DH59 902 aa19.59■□□□□ 0.73
CXXC1-206ENST00000586568 NPHP1O15259 732 aa19.59■□□□□ 0.73
CXXC1-206ENST00000586568 ST5P78524 1137 aa19.59■□□□□ 0.73
CXXC1-206ENST00000586568 TAF7Q15545 349 aaPredicted RBP19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms