RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 TRIM37O94972 964 aa12.23□□□□□ -0.45
ZNF540-203ENST00000586134 FAM182BQ5T319 152 aa12.23□□□□□ -0.45
ZNF540-203ENST00000586134 PLCD4Q9BRC7 762 aa12.23□□□□□ -0.45
ZNF540-203ENST00000586134 POLR3GLQ9BT43 218 aa12.23□□□□□ -0.45
ZNF540-203ENST00000586134 SLKQ9H2G2 1235 aaPredicted RBP12.23□□□□□ -0.45
ZNF540-203ENST00000586134 EN1Q05925 392 aaPredicted RBP12.23□□□□□ -0.45
ZNF540-203ENST00000586134 NBPF20Q3BBV1 942 aa12.23□□□□□ -0.45
ZNF540-203ENST00000586134 AEBP1Q8IUX7 1158 aa12.23□□□□□ -0.45
ZNF540-203ENST00000586134 EXOC5O00471 708 aa12.22□□□□□ -0.45
ZNF540-203ENST00000586134 FYB1O15117 783 aa12.22□□□□□ -0.45
ZNF540-203ENST00000586134 PLSCR1O15162 318 aa12.22□□□□□ -0.45
ZNF540-203ENST00000586134 ATP2B3Q16720 1220 aa12.22□□□□□ -0.45
ZNF540-203ENST00000586134 CREBRFQ8IUR6 639 aa12.22□□□□□ -0.45
ZNF540-203ENST00000586134 NGEFQ8N5V2 710 aa12.22□□□□□ -0.45
ZNF540-203ENST00000586134 ANKRD24Q8TF21 1146 aa12.22□□□□□ -0.45
ZNF540-203ENST00000586134 APBA3O96018 575 aa12.21□□□□□ -0.45
ZNF540-203ENST00000586134 NASPP49321 788 aaPredicted RBP12.21□□□□□ -0.45
ZNF540-203ENST00000586134 CTR9Q6PD62 1173 aa12.21□□□□□ -0.45
ZNF540-203ENST00000586134 CERS3Q8IU89 383 aa12.21□□□□□ -0.45
ZNF540-203ENST00000586134 MFAP1P55081 439 aaKnown RBP12.21□□□□□ -0.46
ZNF540-203ENST00000586134 EIF4G2P78344 907 aaKnown RBP eCLIP12.21□□□□□ -0.46
ZNF540-203ENST00000586134 MARCH10Q8NA82 808 aaPredicted RBP12.21□□□□□ -0.46
ZNF540-203ENST00000586134 TAOK2Q9UL54 1235 aa12.21□□□□□ -0.46
ZNF540-203ENST00000586134 ZKSCAN5Q9Y2L8 839 aa12.21□□□□□ -0.46
ZNF540-203ENST00000586134 MAP3K19Q56UN5 1328 aa12.21□□□□□ -0.46
ZNF540-203ENST00000586134 RGPD2P0DJD1 1756 aa12.21□□□□□ -0.46
ZNF540-203ENST00000586134 IL2RBP14784 551 aa12.2□□□□□ -0.46
ZNF540-203ENST00000586134 EZH2Q15910 746 aaKnown RBP12.2□□□□□ -0.46
ZNF540-203ENST00000586134 TRIM6-TRIM34B2RNG4 842 aa12.2□□□□□ -0.46
ZNF540-203ENST00000586134 HOXC9P31274 260 aa12.2□□□□□ -0.46
ZNF540-203ENST00000586134 LMOD3Q0VAK6 560 aa12.2□□□□□ -0.46
ZNF540-203ENST00000586134 TRIM34Q9BYJ4 488 aa12.2□□□□□ -0.46
ZNF540-203ENST00000586134 SHANK3Q9BYB0 1731 aa12.19□□□□□ -0.46
ZNF540-203ENST00000586134 EGFL6Q8IUX8 553 aa12.19□□□□□ -0.46
ZNF540-203ENST00000586134 NLRP2Q9NX02 1062 aa12.19□□□□□ -0.46
ZNF540-203ENST00000586134 OGFRQ9NZT2 677 aa12.19□□□□□ -0.46
ZNF540-203ENST00000586134 MAP2P11137 1827 aaKnown RBP12.19□□□□□ -0.46
ZNF540-203ENST00000586134 NSD3Q9BZ95 1437 aa12.19□□□□□ -0.46
ZNF540-203ENST00000586134 HSP90AB1P08238 724 aaKnown RBP12.18□□□□□ -0.46
ZNF540-203ENST00000586134 INSRP06213 1382 aa12.18□□□□□ -0.46
ZNF540-203ENST00000586134 CGNL1Q0VF96 1302 aa12.18□□□□□ -0.46
ZNF540-203ENST00000586134 ZNF710Q8N1W2 664 aa12.18□□□□□ -0.46
ZNF540-203ENST00000586134 MYCBPQ99417 103 aaPredicted RBP12.18□□□□□ -0.46
ZNF540-203ENST00000586134 FLT4P35916 1363 aa12.17□□□□□ -0.46
ZNF540-203ENST00000586134 AMPHP49418 695 aa12.17□□□□□ -0.46
ZNF540-203ENST00000586134 HSP90AB3PQ58FF7 597 aa12.17□□□□□ -0.46
ZNF540-203ENST00000586134 GAS2L3Q86XJ1 694 aa12.17□□□□□ -0.46
ZNF540-203ENST00000586134 PDLIM2Q96JY6 352 aa12.17□□□□□ -0.46
ZNF540-203ENST00000586134 CARD14Q9BXL6 1004 aa12.17□□□□□ -0.46
ZNF540-203ENST00000586134 PLEKHG2Q9H7P9 1386 aa12.17□□□□□ -0.46
ZNF540-203ENST00000586134 BTAF1O14981 1849 aa12.17□□□□□ -0.46
ZNF540-203ENST00000586134 NBPF14Q5TI25 921 aa12.16□□□□□ -0.46
ZNF540-203ENST00000586134 BANK1Q8NDB2 785 aa12.16□□□□□ -0.46
ZNF540-203ENST00000586134 GGNBP2Q9H3C7 697 aa12.16□□□□□ -0.46
ZNF540-203ENST00000586134 NCAPD2Q15021 1401 aa12.16□□□□□ -0.46
ZNF540-203ENST00000586134 CAPN2P17655 700 aa12.16□□□□□ -0.46
ZNF540-203ENST00000586134 PDCL2Q8N4E4 241 aa12.16□□□□□ -0.46
ZNF540-203ENST00000586134 NSD2O96028 1365 aa12.16□□□□□ -0.46
ZNF540-203ENST00000586134 HSPA5P11021 654 aaKnown RBP12.15□□□□□ -0.46
ZNF540-203ENST00000586134 TMED8Q6PL24 325 aaPredicted RBP12.15□□□□□ -0.46
ZNF540-203ENST00000586134 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.15□□□□□ -0.46
ZNF540-203ENST00000586134 CCDC39Q9UFE4 941 aa12.15□□□□□ -0.46
ZNF540-203ENST00000586134 NCAPGQ9BPX3 1015 aa12.15□□□□□ -0.47
ZNF540-203ENST00000586134 KAT6BQ8WYB5 2073 aa12.14□□□□□ -0.47
ZNF540-203ENST00000586134 CASZ1Q86V15 1759 aa12.14□□□□□ -0.47
ZNF540-203ENST00000586134 QSER1Q2KHR3 1735 aa12.14□□□□□ -0.47
ZNF540-203ENST00000586134 PKD1L3Q7Z443 1732 aa12.14□□□□□ -0.47
ZNF540-203ENST00000586134 UPF2Q9HAU5 1272 aaKnown RBP12.14□□□□□ -0.47
ZNF540-203ENST00000586134 BRMS1Q9HCU9 246 aa12.14□□□□□ -0.47
ZNF540-203ENST00000586134 CEP83Q9Y592 693 aa12.14□□□□□ -0.47
ZNF540-203ENST00000586134 BRPF1P55201 1214 aaPredicted RBP12.13□□□□□ -0.47
ZNF540-203ENST00000586134 SATB1Q01826 763 aa12.13□□□□□ -0.47
ZNF540-203ENST00000586134 PAPPAQ13219 1627 aa12.13□□□□□ -0.47
ZNF540-203ENST00000586134 DOT1LQ8TEK3 1739 aa12.13□□□□□ -0.47
ZNF540-203ENST00000586134 SLFN14P0C7P3 912 aa12.13□□□□□ -0.47
ZNF540-203ENST00000586134 SETQ01105 290 aaPredicted RBP12.13□□□□□ -0.47
ZNF540-203ENST00000586134 GBP4Q96PP9 640 aa12.13□□□□□ -0.47
ZNF540-203ENST00000586134 LY75O60449 1722 aa12.12□□□□□ -0.47
ZNF540-203ENST00000586134 TNNT3P45378 269 aaPredicted RBP12.12□□□□□ -0.47
ZNF540-203ENST00000586134 R3HDM1Q15032 1099 aaKnown RBP12.12□□□□□ -0.47
ZNF540-203ENST00000586134 RRS1Q15050 365 aaKnown RBP12.12□□□□□ -0.47
ZNF540-203ENST00000586134 TBC1D2Q9BYX2 928 aa12.12□□□□□ -0.47
ZNF540-203ENST00000586134 PANK3Q9H999 370 aa12.12□□□□□ -0.47
ZNF540-203ENST00000586134 SMC4Q9NTJ3 1288 aa12.12□□□□□ -0.47
ZNF540-203ENST00000586134 MEGF6O75095 1541 aa12.12□□□□□ -0.47
ZNF540-203ENST00000586134 LOC102724159A0A0B4J2E5 919 aa12.11□□□□□ -0.47
ZNF540-203ENST00000586134 PSDA5PKW4 1024 aaPredicted RBP12.11□□□□□ -0.47
ZNF540-203ENST00000586134 PWP2Q15269 919 aaKnown RBP12.11□□□□□ -0.47
ZNF540-203ENST00000586134 FAM43BQ6ZT52 329 aaPredicted RBP12.11□□□□□ -0.47
ZNF540-203ENST00000586134 CRBNQ96SW2 442 aa12.11□□□□□ -0.47
ZNF540-203ENST00000586134 FEZ2Q9UHY8 353 aaPredicted RBP12.11□□□□□ -0.47
ZNF540-203ENST00000586134 RAD50Q92878 1312 aa12.11□□□□□ -0.47
ZNF540-203ENST00000586134 CCDC172P0C7W6 258 aa12.1□□□□□ -0.47
ZNF540-203ENST00000586134 GTF2A1P52655 376 aaPredicted RBP12.1□□□□□ -0.47
ZNF540-203ENST00000586134 NBPF6Q5VWK0 638 aa12.1□□□□□ -0.47
ZNF540-203ENST00000586134 PNISRQ8TF01 805 aaKnown RBP12.1□□□□□ -0.47
ZNF540-203ENST00000586134 ANKRD7Q92527 254 aa12.1□□□□□ -0.47
ZNF540-203ENST00000586134 NBPF4Q96M43 638 aa12.1□□□□□ -0.47
ZNF540-203ENST00000586134 RAI14Q9P0K7 980 aa12.1□□□□□ -0.47
ZNF540-203ENST00000586134 CIZ1Q9ULV3 898 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms