RNA–Protein interactions for RNA: ENST00000585486.1

SPC24-202, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-202ENST00000585486 DNAJC10Q8IXB1 793 aa17.16■□□□□ 0.34
SPC24-202ENST00000585486 NBPF15Q8N660 670 aa17.16■□□□□ 0.34
SPC24-202ENST00000585486 BTAF1O14981 1849 aa17.16■□□□□ 0.34
SPC24-202ENST00000585486 KIF16BQ96L93 1317 aa17.16■□□□□ 0.34
SPC24-202ENST00000585486 IRX6P78412 446 aaPredicted RBP17.15■□□□□ 0.34
SPC24-202ENST00000585486 ZKSCAN2Q63HK3 967 aa17.15■□□□□ 0.34
SPC24-202ENST00000585486 ATF7IPQ6VMQ6 1270 aa17.15■□□□□ 0.34
SPC24-202ENST00000585486 SMARCC1Q92922 1105 aaPredicted RBP17.15■□□□□ 0.34
SPC24-202ENST00000585486 DDX21Q9NR30 783 aaKnown RBP eCLIP17.15■□□□□ 0.34
SPC24-202ENST00000585486 LOC102724428A0A0B4J2F2 783 aa17.14■□□□□ 0.33
SPC24-202ENST00000585486 ANXA1P04083 346 aa17.14■□□□□ 0.33
SPC24-202ENST00000585486 CYP19A1P11511 503 aaPredicted RBP17.14■□□□□ 0.33
SPC24-202ENST00000585486 SIK1P57059 783 aa17.14■□□□□ 0.33
SPC24-202ENST00000585486 ITPK1Q13572 414 aa17.14■□□□□ 0.33
SPC24-202ENST00000585486 FRAT1Q92837 279 aaPredicted RBP17.14■□□□□ 0.33
SPC24-202ENST00000585486 CHMP4AQ9BY43 222 aa17.14■□□□□ 0.33
SPC24-202ENST00000585486 PHAXQ9H814 394 aaKnown RBP17.14■□□□□ 0.33
SPC24-202ENST00000585486 DBF4Q9UBU7 674 aaPredicted RBP17.14■□□□□ 0.33
SPC24-202ENST00000585486 ERBB4Q15303 1308 aa17.14■□□□□ 0.33
SPC24-202ENST00000585486 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.13■□□□□ 0.33
SPC24-202ENST00000585486 PANK1Q8TE04 598 aa17.13■□□□□ 0.33
SPC24-202ENST00000585486 RBM42Q9BTD8 480 aaKnown RBP17.13■□□□□ 0.33
SPC24-202ENST00000585486 TEX13AQ9BXU3 409 aaPredicted RBP17.13■□□□□ 0.33
SPC24-202ENST00000585486 ABCC4O15439 1325 aa17.13■□□□□ 0.33
SPC24-202ENST00000585486 PTPRCP08575 1304 aa17.13■□□□□ 0.33
SPC24-202ENST00000585486 A1BGP04217 495 aa17.12■□□□□ 0.33
SPC24-202ENST00000585486 FLIIQ13045 1269 aa17.12■□□□□ 0.33
SPC24-202ENST00000585486 STK31Q9BXU1 1019 aa17.12■□□□□ 0.33
SPC24-202ENST00000585486 GTF3C3Q9Y5Q9 886 aa17.12■□□□□ 0.33
SPC24-202ENST00000585486 CACNA1FO60840 1977 aa17.11■□□□□ 0.33
SPC24-202ENST00000585486 RREB1Q92766 1687 aa17.11■□□□□ 0.33
SPC24-202ENST00000585486 EP400Q96L91 3159 aa17.11■□□□□ 0.33
SPC24-202ENST00000585486 LY75O60449 1722 aa17.11■□□□□ 0.33
SPC24-202ENST00000585486 IPO8O15397 1037 aaKnown RBP17.11■□□□□ 0.33
SPC24-202ENST00000585486 FKBP8Q14318 412 aa17.11■□□□□ 0.33
SPC24-202ENST00000585486 KAT6BQ8WYB5 2073 aa17.11■□□□□ 0.33
SPC24-202ENST00000585486 TRIM37O94972 964 aa17.1■□□□□ 0.33
SPC24-202ENST00000585486 INTS5Q6P9B9 1019 aaKnown RBP17.1■□□□□ 0.33
SPC24-202ENST00000585486 DZIP1LQ8IYY4 767 aaKnown RBP17.1■□□□□ 0.33
SPC24-202ENST00000585486 CRBNQ96SW2 442 aa17.1■□□□□ 0.33
SPC24-202ENST00000585486 HYPKQ9NX55 129 aa17.1■□□□□ 0.33
SPC24-202ENST00000585486 PIP4K2AP48426 406 aaPredicted RBP17.09■□□□□ 0.33
SPC24-202ENST00000585486 EXOC6Q8TAG9 804 aa17.09■□□□□ 0.33
SPC24-202ENST00000585486 CLUAP1Q96AJ1 413 aa17.09■□□□□ 0.33
SPC24-202ENST00000585486 API5Q9BZZ5 524 aaKnown RBP17.09■□□□□ 0.33
SPC24-202ENST00000585486 ADCY9O60503 1353 aa17.09■□□□□ 0.33
SPC24-202ENST00000585486 COL5A3P25940 1745 aaPredicted RBP17.08■□□□□ 0.32
SPC24-202ENST00000585486 ATP6V1AP38606 617 aa17.08■□□□□ 0.32
SPC24-202ENST00000585486 PROM2Q8N271 834 aa17.08■□□□□ 0.32
SPC24-202ENST00000585486 LINC00116Q8NCU8 138 aa17.08■□□□□ 0.32
SPC24-202ENST00000585486 F6X3S4 739 aa17.07■□□□□ 0.32
SPC24-202ENST00000585486 STARD3NLO95772 234 aa17.07■□□□□ 0.32
SPC24-202ENST00000585486 ERICH6BQ5W0A0 696 aa17.07■□□□□ 0.32
SPC24-202ENST00000585486 INTS3Q68E01 1043 aaKnown RBP17.07■□□□□ 0.32
SPC24-202ENST00000585486 TMEM57Q8N5G2 664 aa17.07■□□□□ 0.32
SPC24-202ENST00000585486 MYL6BP14649 208 aa17.06■□□□□ 0.32
SPC24-202ENST00000585486 KCNQ4P56696 695 aa17.06■□□□□ 0.32
SPC24-202ENST00000585486 XAGE3Q8WTP9 111 aa17.06■□□□□ 0.32
SPC24-202ENST00000585486 LRRC4BQ9NT99 713 aa17.06■□□□□ 0.32
SPC24-202ENST00000585486 COG6Q9Y2V7 657 aa17.06■□□□□ 0.32
SPC24-202ENST00000585486 TNS1Q9HBL0 1735 aaKnown RBP17.05■□□□□ 0.32
SPC24-202ENST00000585486 NEFLP07196 543 aa17.05■□□□□ 0.32
SPC24-202ENST00000585486 MS4A1P11836 297 aa17.05■□□□□ 0.32
SPC24-202ENST00000585486 CANXP27824 592 aaKnown RBP17.05■□□□□ 0.32
SPC24-202ENST00000585486 MVPQ14764 893 aaKnown RBP17.05■□□□□ 0.32
SPC24-202ENST00000585486 COPS6Q7L5N1 327 aa17.05■□□□□ 0.32
SPC24-202ENST00000585486 ZBTB1Q9Y2K1 713 aa17.05■□□□□ 0.32
SPC24-202ENST00000585486 MYH14Q7Z406 1995 aaKnown RBP17.05■□□□□ 0.32
SPC24-202ENST00000585486 PI4KAP2A4QPH2 592 aa17.04■□□□□ 0.32
SPC24-202ENST00000585486 PLSCR1O15162 318 aa17.04■□□□□ 0.32
SPC24-202ENST00000585486 CRKLP46109 303 aaKnown RBP17.04■□□□□ 0.32
SPC24-202ENST00000585486 EIF5P55010 431 aaKnown RBP17.04■□□□□ 0.32
SPC24-202ENST00000585486 FKBP5Q13451 457 aaPredicted RBP17.04■□□□□ 0.32
SPC24-202ENST00000585486 KSR2Q6VAB6 950 aa17.04■□□□□ 0.32
SPC24-202ENST00000585486 TTLL7Q6ZT98 887 aa17.04■□□□□ 0.32
SPC24-202ENST00000585486 PI4KAP1Q8N8J0 262 aa17.04■□□□□ 0.32
SPC24-202ENST00000585486 CCDC87Q9NVE4 849 aa17.04■□□□□ 0.32
SPC24-202ENST00000585486 PXDNLA1KZ92 1463 aa17.04■□□□□ 0.32
SPC24-202ENST00000585486 CNTNAP4Q9C0A0 1308 aa17.03■□□□□ 0.32
SPC24-202ENST00000585486 RC3H1Q5TC82 1133 aaKnown RBP17.03■□□□□ 0.32
SPC24-202ENST00000585486 ZBTB7BO15156 539 aaPredicted RBP17.02■□□□□ 0.32
SPC24-202ENST00000585486 IL6STP40189 918 aaPredicted RBP17.02■□□□□ 0.32
SPC24-202ENST00000585486 BEND3Q5T5X7 828 aa17.02■□□□□ 0.32
SPC24-202ENST00000585486 CCNL1Q9UK58 526 aaPredicted RBP17.02■□□□□ 0.32
SPC24-202ENST00000585486 ATP10DQ9P241 1426 aa17.02■□□□□ 0.31
SPC24-202ENST00000585486 IBTKQ9P2D0 1353 aaPredicted RBP17.02■□□□□ 0.31
SPC24-202ENST00000585486 TAF1LQ8IZX4 1826 aa17.01■□□□□ 0.31
SPC24-202ENST00000585486 FTSJ3Q8IY81 847 aaKnown RBP17.01■□□□□ 0.31
SPC24-202ENST00000585486 DNAAF4Q8WXU2 420 aa17.01■□□□□ 0.31
SPC24-202ENST00000585486 MAP3K2Q9Y2U5 619 aa17.01■□□□□ 0.31
SPC24-202ENST00000585486 N4BP2Q86UW6 1770 aaPredicted RBP17.01■□□□□ 0.31
SPC24-202ENST00000585486 AIMP1Q12904 312 aaKnown RBP17■□□□□ 0.31
SPC24-202ENST00000585486 SLC27A3Q5K4L6 730 aa17■□□□□ 0.31
SPC24-202ENST00000585486 ANKRD13DQ6ZTN6 518 aa17■□□□□ 0.31
SPC24-202ENST00000585486 AMIGO3Q86WK7 504 aa17■□□□□ 0.31
SPC24-202ENST00000585486 PLBD2Q8NHP8 589 aa17■□□□□ 0.31
SPC24-202ENST00000585486 ZBTB40Q9NUA8 1239 aa17■□□□□ 0.31
SPC24-202ENST00000585486 NUP188Q5SRE5 1749 aa16.99■□□□□ 0.31
SPC24-202ENST00000585486 CCT4P50991 539 aaKnown RBP16.99■□□□□ 0.31
SPC24-202ENST00000585486 TXNRD1Q16881 649 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms