RNA–Protein interactions for RNA: ENST00000585027.1

TMEM199-209, Transcript of transmembrane protein 199, humanhuman

TSL 2

Gene TMEM199, Length 586 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM199-209ENST00000585027 ZNF496Q96IT1 587 aaPredicted RBP13.48□□□□□ -0.25
TMEM199-209ENST00000585027 TTC5Q8N0Z6 440 aa13.47□□□□□ -0.25
TMEM199-209ENST00000585027 NARFQ9UHQ1 456 aa13.47□□□□□ -0.25
TMEM199-209ENST00000585027 PARP3Q9Y6F1 533 aa13.47□□□□□ -0.25
TMEM199-209ENST00000585027 AFDNP55196 1824 aaKnown RBP13.46□□□□□ -0.25
TMEM199-209ENST00000585027 POLRMTO00411 1230 aaKnown RBP13.46□□□□□ -0.25
TMEM199-209ENST00000585027 KCNA3P22001 575 aa13.46□□□□□ -0.25
TMEM199-209ENST00000585027 EIF5P55010 431 aaKnown RBP13.46□□□□□ -0.25
TMEM199-209ENST00000585027 USPL1Q5W0Q7 1092 aa13.46□□□□□ -0.25
TMEM199-209ENST00000585027 BCL2L12Q9HB09 334 aa13.46□□□□□ -0.25
TMEM199-209ENST00000585027 SCN7AQ01118 1682 aa13.46□□□□□ -0.26
TMEM199-209ENST00000585027 ARFGEF1Q9Y6D6 1849 aa13.46□□□□□ -0.26
TMEM199-209ENST00000585027 A0A0G2JLW4 131 aa13.45□□□□□ -0.26
TMEM199-209ENST00000585027 ZPR1O75312 459 aa13.45□□□□□ -0.26
TMEM199-209ENST00000585027 STARD3NLO95772 234 aa13.45□□□□□ -0.26
TMEM199-209ENST00000585027 DPEP1P16444 411 aa13.45□□□□□ -0.26
TMEM199-209ENST00000585027 TEX13AQ9BXU3 409 aaPredicted RBP13.45□□□□□ -0.26
TMEM199-209ENST00000585027 WWC3Q9ULE0 1092 aa13.45□□□□□ -0.26
TMEM199-209ENST00000585027 DLG5Q8TDM6 1919 aa13.45□□□□□ -0.26
TMEM199-209ENST00000585027 KCNQ3O43525 872 aa13.44□□□□□ -0.26
TMEM199-209ENST00000585027 HTATSF1O43719 755 aaKnown RBP13.44□□□□□ -0.26
TMEM199-209ENST00000585027 FMNL2Q96PY5 1086 aa13.44□□□□□ -0.26
TMEM199-209ENST00000585027 ATP10DQ9P241 1426 aa13.44□□□□□ -0.26
TMEM199-209ENST00000585027 BTBD11A6QL63 1104 aa13.43□□□□□ -0.26
TMEM199-209ENST00000585027 CANXP27824 592 aaKnown RBP13.43□□□□□ -0.26
TMEM199-209ENST00000585027 NFIXQ14938 502 aa13.43□□□□□ -0.26
TMEM199-209ENST00000585027 MCM10Q7L590 875 aa13.43□□□□□ -0.26
TMEM199-209ENST00000585027 PLEKHF1Q96S99 279 aa13.43□□□□□ -0.26
TMEM199-209ENST00000585027 DLEC1Q9Y238 1755 aa13.43□□□□□ -0.26
TMEM199-209ENST00000585027 IL6STP40189 918 aaPredicted RBP13.42□□□□□ -0.26
TMEM199-209ENST00000585027 BCORQ6W2J9 1755 aa13.42□□□□□ -0.26
TMEM199-209ENST00000585027 KDM3BQ7LBC6 1761 aa13.41□□□□□ -0.26
TMEM199-209ENST00000585027 A0A087WZG4 1122 aa13.41□□□□□ -0.26
TMEM199-209ENST00000585027 C1QTNF8P60827 252 aa13.41□□□□□ -0.26
TMEM199-209ENST00000585027 BCS1LQ9Y276 419 aa13.41□□□□□ -0.26
TMEM199-209ENST00000585027 A1BGP04217 495 aa13.4□□□□□ -0.26
TMEM199-209ENST00000585027 DCTN1Q14203 1278 aa13.4□□□□□ -0.26
TMEM199-209ENST00000585027 RTF1Q92541 710 aaKnown RBP13.4□□□□□ -0.26
TMEM199-209ENST00000585027 GIGYF1O75420 1035 aaPredicted RBP13.39□□□□□ -0.27
TMEM199-209ENST00000585027 SERPINB2P05120 415 aa13.39□□□□□ -0.27
TMEM199-209ENST00000585027 CHRNA5P30532 468 aa13.39□□□□□ -0.27
TMEM199-209ENST00000585027 RALBP1Q15311 655 aa13.39□□□□□ -0.27
TMEM199-209ENST00000585027 PIM2Q9P1W9 311 aa13.39□□□□□ -0.27
TMEM199-209ENST00000585027 USP16Q9Y5T5 823 aa13.39□□□□□ -0.27
TMEM199-209ENST00000585027 LAMB4A4D0S4 1761 aa13.39□□□□□ -0.27
TMEM199-209ENST00000585027 ANKRD31Q8N7Z5 1873 aa13.39□□□□□ -0.27
TMEM199-209ENST00000585027 CARMIL3Q8ND23 1372 aa13.38□□□□□ -0.27
TMEM199-209ENST00000585027 PRAMEF22A3QJZ6 481 aa13.38□□□□□ -0.27
TMEM199-209ENST00000585027 SNRPA1P09661 255 aaKnown RBP13.38□□□□□ -0.27
TMEM199-209ENST00000585027 CAMTA2O94983 1202 aa13.37□□□□□ -0.27
TMEM199-209ENST00000585027 TAF7Q15545 349 aaPredicted RBP13.37□□□□□ -0.27
TMEM199-209ENST00000585027 NFE2L2Q16236 605 aa13.37□□□□□ -0.27
TMEM199-209ENST00000585027 DALRD3Q5D0E6 543 aaKnown RBP13.37□□□□□ -0.27
TMEM199-209ENST00000585027 TBC1D9BQ66K14 1250 aa13.37□□□□□ -0.27
TMEM199-209ENST00000585027 TBC1D2BQ9UPU7 963 aa13.37□□□□□ -0.27
TMEM199-209ENST00000585027 ARHGAP27Q6ZUM4 889 aa13.36□□□□□ -0.27
TMEM199-209ENST00000585027 NBPF26B4DH59 902 aa13.35□□□□□ -0.27
TMEM199-209ENST00000585027 DDX10Q13206 875 aaKnown RBP13.35□□□□□ -0.27
TMEM199-209ENST00000585027 NBPF10Q6P3W6 841 aaKnown RBP13.35□□□□□ -0.27
TMEM199-209ENST00000585027 NBPF15Q8N660 670 aa13.35□□□□□ -0.27
TMEM199-209ENST00000585027 PNNQ9H307 717 aaKnown RBP13.35□□□□□ -0.27
TMEM199-209ENST00000585027 GPBP1L1Q9HC44 474 aaPredicted RBP13.35□□□□□ -0.27
TMEM199-209ENST00000585027 COL11A2P13942 1736 aaPredicted RBP13.35□□□□□ -0.27
TMEM199-209ENST00000585027 SBF1O95248 1867 aa13.35□□□□□ -0.27
TMEM199-209ENST00000585027 RGL2O15211 777 aa13.34□□□□□ -0.27
TMEM199-209ENST00000585027 NEFMP07197 916 aa13.34□□□□□ -0.27
TMEM199-209ENST00000585027 BICDL1Q6ZP65 573 aa13.34□□□□□ -0.27
TMEM199-209ENST00000585027 DZIP3Q86Y13 1208 aaKnown RBP13.34□□□□□ -0.27
TMEM199-209ENST00000585027 PNISRQ8TF01 805 aaKnown RBP13.34□□□□□ -0.27
TMEM199-209ENST00000585027 MIS18AQ9NYP9 233 aa13.34□□□□□ -0.27
TMEM199-209ENST00000585027 MYBBP1AQ9BQG0 1328 aaKnown RBP13.34□□□□□ -0.27
TMEM199-209ENST00000585027 PIP4K2AP48426 406 aaPredicted RBP13.33□□□□□ -0.28
TMEM199-209ENST00000585027 PRR5LQ6MZQ0 368 aa13.33□□□□□ -0.28
TMEM199-209ENST00000585027 THUMPD2Q9BTF0 503 aaKnown RBP13.33□□□□□ -0.28
TMEM199-209ENST00000585027 BRIP1Q9BX63 1249 aa13.33□□□□□ -0.28
TMEM199-209ENST00000585027 ZNF330Q9Y3S2 320 aaPredicted RBP13.33□□□□□ -0.28
TMEM199-209ENST00000585027 KIF3CO14782 793 aa13.32□□□□□ -0.28
TMEM199-209ENST00000585027 EIF4A1P60842 406 aaKnown RBP13.32□□□□□ -0.28
TMEM199-209ENST00000585027 CLEC4GQ6UXB4 293 aa13.32□□□□□ -0.28
TMEM199-209ENST00000585027 C2CD5Q86YS7 1000 aa13.32□□□□□ -0.28
TMEM199-209ENST00000585027 ZNF526Q8TF50 670 aaPredicted RBP13.32□□□□□ -0.28
TMEM199-209ENST00000585027 PDZRN3Q9UPQ7 1066 aa13.32□□□□□ -0.28
TMEM199-209ENST00000585027 MAPK8IP3Q9UPT6 1336 aa13.32□□□□□ -0.28
TMEM199-209ENST00000585027 ARFGEF2Q9Y6D5 1785 aa13.31□□□□□ -0.28
TMEM199-209ENST00000585027 H0YIN7 160 aa13.31□□□□□ -0.28
TMEM199-209ENST00000585027 C9orf131Q5VYM1 1079 aa13.31□□□□□ -0.28
TMEM199-209ENST00000585027 TTLL6Q8N841 843 aa13.31□□□□□ -0.28
TMEM199-209ENST00000585027 SETDB2Q96T68 719 aa13.31□□□□□ -0.28
TMEM199-209ENST00000585027 SENP3-EIF4A1A0A087X0R7 540 aa13.3□□□□□ -0.28
TMEM199-209ENST00000585027 NPM2Q86SE8 214 aaKnown RBP13.3□□□□□ -0.28
TMEM199-209ENST00000585027 PDE6BP35913 854 aa13.29□□□□□ -0.28
TMEM199-209ENST00000585027 TMPOP42166 694 aaKnown RBP13.29□□□□□ -0.28
TMEM199-209ENST00000585027 CNBD1Q8NA66 436 aa13.29□□□□□ -0.28
TMEM199-209ENST00000585027 FER1L6Q2WGJ9 1857 aa13.28□□□□□ -0.28
TMEM199-209ENST00000585027 PRELPP51888 382 aa13.28□□□□□ -0.28
TMEM199-209ENST00000585027 RIPK4P57078 832 aa13.28□□□□□ -0.28
TMEM199-209ENST00000585027 CCDC24Q8N4L8 307 aa13.28□□□□□ -0.28
TMEM199-209ENST00000585027 BABAM1Q9NWV8 329 aa13.28□□□□□ -0.28
TMEM199-209ENST00000585027 ZNF652Q9Y2D9 606 aa13.28□□□□□ -0.28
TMEM199-209ENST00000585027 NUP98P52948 1817 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 739.6 ms