RNA–Protein interactions for RNA: ENST00000584952.1

AC055811.3-201, humanhuman

BASIC

Gene AC055811.3, Length 686 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.3-201ENST00000584952 C9orf131Q5VYM1 1079 aa18.11■□□□□ 0.49
AC055811.3-201ENST00000584952 BRCA1P38398 1863 aaKnown RBP18.11■□□□□ 0.49
AC055811.3-201ENST00000584952 COL15A1P39059 1388 aa18.1■□□□□ 0.49
AC055811.3-201ENST00000584952 NPC1L1Q9UHC9 1359 aa18.1■□□□□ 0.49
AC055811.3-201ENST00000584952 CNGB1Q14028 1251 aaPredicted RBP18.1■□□□□ 0.49
AC055811.3-201ENST00000584952 U2SURPO15042 1029 aaKnown RBP18.09■□□□□ 0.49
AC055811.3-201ENST00000584952 TTC5Q8N0Z6 440 aa18.09■□□□□ 0.49
AC055811.3-201ENST00000584952 BCL2L12Q9HB09 334 aa18.09■□□□□ 0.49
AC055811.3-201ENST00000584952 NMRK2Q9NPI5 230 aa18.09■□□□□ 0.49
AC055811.3-201ENST00000584952 CANXP27824 592 aaKnown RBP18.08■□□□□ 0.48
AC055811.3-201ENST00000584952 IL17REQ8NFR9 667 aa18.08■□□□□ 0.48
AC055811.3-201ENST00000584952 COL3A1P02461 1466 aaPredicted RBP18.07■□□□□ 0.48
AC055811.3-201ENST00000584952 GNAT3A8MTJ3 354 aa18.07■□□□□ 0.48
AC055811.3-201ENST00000584952 STARD3NLO95772 234 aa18.07■□□□□ 0.48
AC055811.3-201ENST00000584952 GAS2L2Q8NHY3 880 aa18.07■□□□□ 0.48
AC055811.3-201ENST00000584952 ARFGEF1Q9Y6D6 1849 aa18.07■□□□□ 0.48
AC055811.3-201ENST00000584952 SERPINB2P05120 415 aa18.06■□□□□ 0.48
AC055811.3-201ENST00000584952 EIF5P55010 431 aaKnown RBP18.06■□□□□ 0.48
AC055811.3-201ENST00000584952 TEFQ10587 303 aa18.06■□□□□ 0.48
AC055811.3-201ENST00000584952 ZNF790Q6PG37 636 aa18.06■□□□□ 0.48
AC055811.3-201ENST00000584952 ZNF496Q96IT1 587 aaPredicted RBP18.06■□□□□ 0.48
AC055811.3-201ENST00000584952 RNF181Q9P0P0 153 aa18.06■□□□□ 0.48
AC055811.3-201ENST00000584952 APLP1P51693 650 aa18.05■□□□□ 0.48
AC055811.3-201ENST00000584952 A0A087WZG4 1122 aa18.04■□□□□ 0.48
AC055811.3-201ENST00000584952 TEX13AQ9BXU3 409 aaPredicted RBP18.04■□□□□ 0.48
AC055811.3-201ENST00000584952 VIRMAQ69YN4 1812 aaKnown RBP18.04■□□□□ 0.48
AC055811.3-201ENST00000584952 KDM2BQ8NHM5 1336 aa18.03■□□□□ 0.48
AC055811.3-201ENST00000584952 UBR2Q8IWV8 1755 aa18.03■□□□□ 0.48
AC055811.3-201ENST00000584952 HEG1Q9ULI3 1381 aa18.03■□□□□ 0.48
AC055811.3-201ENST00000584952 IFFO2Q5TF58 517 aa18.02■□□□□ 0.48
AC055811.3-201ENST00000584952 BICDL1Q6ZP65 573 aa18.02■□□□□ 0.48
AC055811.3-201ENST00000584952 RBM46Q8TBY0 533 aaKnown RBP18.02■□□□□ 0.48
AC055811.3-201ENST00000584952 PHACTR3Q96KR7 559 aa18.02■□□□□ 0.48
AC055811.3-201ENST00000584952 NRXN2Q9P2S2 1712 aa18.01■□□□□ 0.47
AC055811.3-201ENST00000584952 C2CD5Q86YS7 1000 aa18.01■□□□□ 0.47
AC055811.3-201ENST00000584952 C16orf71Q8IYS4 520 aaPredicted RBP18.01■□□□□ 0.47
AC055811.3-201ENST00000584952 TTLL6Q8N841 843 aa18.01■□□□□ 0.47
AC055811.3-201ENST00000584952 CFAP53Q96M91 514 aa18.01■□□□□ 0.47
AC055811.3-201ENST00000584952 AFDNP55196 1824 aaKnown RBP18■□□□□ 0.47
AC055811.3-201ENST00000584952 H0YIN7 160 aa18■□□□□ 0.47
AC055811.3-201ENST00000584952 PRKAR2BP31323 418 aa18■□□□□ 0.47
AC055811.3-201ENST00000584952 TBC1D9BQ66K14 1250 aa18■□□□□ 0.47
AC055811.3-201ENST00000584952 FMNL2Q96PY5 1086 aa18■□□□□ 0.47
AC055811.3-201ENST00000584952 RRAGCQ9HB90 399 aa18■□□□□ 0.47
AC055811.3-201ENST00000584952 TBC1D2BQ9UPU7 963 aa18■□□□□ 0.47
AC055811.3-201ENST00000584952 CEMIPQ8WUJ3 1361 aa18■□□□□ 0.47
AC055811.3-201ENST00000584952 IL6STP40189 918 aaPredicted RBP17.99■□□□□ 0.47
AC055811.3-201ENST00000584952 RASSF7Q02833 373 aa17.99■□□□□ 0.47
AC055811.3-201ENST00000584952 DNAJC5GQ8N7S2 189 aa17.99■□□□□ 0.47
AC055811.3-201ENST00000584952 RSPH6AQ9H0K4 717 aa17.99■□□□□ 0.47
AC055811.3-201ENST00000584952 ZNF330Q9Y3S2 320 aaPredicted RBP17.99■□□□□ 0.47
AC055811.3-201ENST00000584952 CARMIL3Q8ND23 1372 aa17.99■□□□□ 0.47
AC055811.3-201ENST00000584952 BTBD11A6QL63 1104 aa17.98■□□□□ 0.47
AC055811.3-201ENST00000584952 KCNQ3O43525 872 aa17.98■□□□□ 0.47
AC055811.3-201ENST00000584952 A1BGP04217 495 aa17.98■□□□□ 0.47
AC055811.3-201ENST00000584952 LMNB1P20700 586 aa17.98■□□□□ 0.47
AC055811.3-201ENST00000584952 ZC3H4Q9UPT8 1303 aaKnown RBP17.98■□□□□ 0.47
AC055811.3-201ENST00000584952 PRELPP51888 382 aa17.97■□□□□ 0.47
AC055811.3-201ENST00000584952 FSTL1Q12841 308 aa17.97■□□□□ 0.47
AC055811.3-201ENST00000584952 NPM2Q86SE8 214 aaKnown RBP17.97■□□□□ 0.47
AC055811.3-201ENST00000584952 BRIP1Q9BX63 1249 aa17.97■□□□□ 0.47
AC055811.3-201ENST00000584952 NUDCQ9Y266 331 aa17.97■□□□□ 0.47
AC055811.3-201ENST00000584952 PDE6BP35913 854 aa17.96■□□□□ 0.47
AC055811.3-201ENST00000584952 PDZRN3Q9UPQ7 1066 aa17.96■□□□□ 0.47
AC055811.3-201ENST00000584952 SBF1O95248 1867 aa17.96■□□□□ 0.47
AC055811.3-201ENST00000584952 SIPA1L3O60292 1781 aaPredicted RBP17.96■□□□□ 0.47
AC055811.3-201ENST00000584952 U2AF1L5P0DN76 240 aaPredicted RBP17.95■□□□□ 0.46
AC055811.3-201ENST00000584952 PPP2R1AP30153 589 aa17.95■□□□□ 0.46
AC055811.3-201ENST00000584952 U2AF1Q01081 240 aaKnown RBP eCLIP17.95■□□□□ 0.46
AC055811.3-201ENST00000584952 PRR5LQ6MZQ0 368 aa17.95■□□□□ 0.46
AC055811.3-201ENST00000584952 USP16Q9Y5T5 823 aa17.95■□□□□ 0.46
AC055811.3-201ENST00000584952 GLTPD2A6NH11 291 aa17.94■□□□□ 0.46
AC055811.3-201ENST00000584952 CAMTA2O94983 1202 aa17.94■□□□□ 0.46
AC055811.3-201ENST00000584952 CCDC24Q8N4L8 307 aa17.94■□□□□ 0.46
AC055811.3-201ENST00000584952 ZNF622Q969S3 477 aaKnown RBP eCLIP17.94■□□□□ 0.46
AC055811.3-201ENST00000584952 SETDB2Q96T68 719 aa17.94■□□□□ 0.46
AC055811.3-201ENST00000584952 DLEC1Q9Y238 1755 aa17.94■□□□□ 0.46
AC055811.3-201ENST00000584952 NFKBIEO00221 500 aa17.93■□□□□ 0.46
AC055811.3-201ENST00000584952 MCM10Q7L590 875 aa17.93■□□□□ 0.46
AC055811.3-201ENST00000584952 RTF1Q92541 710 aaKnown RBP17.93■□□□□ 0.46
AC055811.3-201ENST00000584952 VEGFAP15692 232 aaPredicted RBP17.92■□□□□ 0.46
AC055811.3-201ENST00000584952 HTRA3P83110 453 aa17.92■□□□□ 0.46
AC055811.3-201ENST00000584952 DZIP3Q86Y13 1208 aaKnown RBP17.92■□□□□ 0.46
AC055811.3-201ENST00000584952 CNBD1Q8NA66 436 aa17.92■□□□□ 0.46
AC055811.3-201ENST00000584952 SCN7AQ01118 1682 aa17.91■□□□□ 0.46
AC055811.3-201ENST00000584952 PRAMEF22A3QJZ6 481 aa17.91■□□□□ 0.46
AC055811.3-201ENST00000584952 C21orf2O43822 256 aa17.91■□□□□ 0.46
AC055811.3-201ENST00000584952 SNRPA1P09661 255 aaKnown RBP17.91■□□□□ 0.46
AC055811.3-201ENST00000584952 SMC1BQ8NDV3 1235 aa17.91■□□□□ 0.46
AC055811.3-201ENST00000584952 TNRC6CQ9HCJ0 1690 aaKnown RBP17.9■□□□□ 0.46
AC055811.3-201ENST00000584952 NPHP1O15259 732 aa17.9■□□□□ 0.46
AC055811.3-201ENST00000584952 PIP4K2AP48426 406 aaPredicted RBP17.9■□□□□ 0.46
AC055811.3-201ENST00000584952 ZNF219Q9P2Y4 722 aaPredicted RBP17.9■□□□□ 0.46
AC055811.3-201ENST00000584952 HTATSF1O43719 755 aaKnown RBP17.89■□□□□ 0.45
AC055811.3-201ENST00000584952 ST5P78524 1137 aa17.89■□□□□ 0.45
AC055811.3-201ENST00000584952 DCTN1Q14203 1278 aa17.89■□□□□ 0.45
AC055811.3-201ENST00000584952 CLEC4GQ6UXB4 293 aa17.89■□□□□ 0.45
AC055811.3-201ENST00000584952 CNKSR1Q969H4 720 aa17.89■□□□□ 0.45
AC055811.3-201ENST00000584952 ANKRD31Q8N7Z5 1873 aa17.88■□□□□ 0.45
AC055811.3-201ENST00000584952 SRGNP10124 158 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms