RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 CANXP27824 592 aaKnown RBP27.37■■□□□ 1.97
TOP3A-219ENST00000584887 PPP2R1AP30153 589 aa27.37■■□□□ 1.97
TOP3A-219ENST00000584887 VSIG10Q8N0Z9 540 aa27.37■■□□□ 1.97
TOP3A-219ENST00000584887 U2AF1L5P0DN76 240 aaPredicted RBP27.36■■□□□ 1.97
TOP3A-219ENST00000584887 U2AF1Q01081 240 aaKnown RBP eCLIP27.36■■□□□ 1.97
TOP3A-219ENST00000584887 ARHGAP27Q6ZUM4 889 aa27.36■■□□□ 1.97
TOP3A-219ENST00000584887 PHACTR3Q96KR7 559 aa27.36■■□□□ 1.97
TOP3A-219ENST00000584887 RSPH6AQ9H0K4 717 aa27.36■■□□□ 1.97
TOP3A-219ENST00000584887 UBR2Q8IWV8 1755 aa27.35■■□□□ 1.97
TOP3A-219ENST00000584887 POLRMTO00411 1230 aaKnown RBP27.34■■□□□ 1.97
TOP3A-219ENST00000584887 STARD3NLO95772 234 aa27.34■■□□□ 1.97
TOP3A-219ENST00000584887 ZNF496Q96IT1 587 aaPredicted RBP27.34■■□□□ 1.97
TOP3A-219ENST00000584887 NARFQ9UHQ1 456 aa27.34■■□□□ 1.97
TOP3A-219ENST00000584887 ZNF790Q6PG37 636 aa27.33■■□□□ 1.97
TOP3A-219ENST00000584887 TM4SF1P30408 202 aa27.32■■□□□ 1.96
TOP3A-219ENST00000584887 ZNF330Q9Y3S2 320 aaPredicted RBP27.32■■□□□ 1.96
TOP3A-219ENST00000584887 CHRNA5P30532 468 aa27.31■■□□□ 1.96
TOP3A-219ENST00000584887 NFIXQ14938 502 aa27.31■■□□□ 1.96
TOP3A-219ENST00000584887 PIM2Q9P1W9 311 aa27.31■■□□□ 1.96
TOP3A-219ENST00000584887 HEG1Q9ULI3 1381 aa27.31■■□□□ 1.96
TOP3A-219ENST00000584887 KCNA3P22001 575 aa27.3■■□□□ 1.96
TOP3A-219ENST00000584887 DALRD3Q5D0E6 543 aaKnown RBP27.29■■□□□ 1.96
TOP3A-219ENST00000584887 BRCA1P38398 1863 aaKnown RBP27.29■■□□□ 1.96
TOP3A-219ENST00000584887 SIPA1L3O60292 1781 aaPredicted RBP27.28■■□□□ 1.96
TOP3A-219ENST00000584887 CEMIPQ8WUJ3 1361 aa27.28■■□□□ 1.96
TOP3A-219ENST00000584887 FMNL2Q96PY5 1086 aa27.28■■□□□ 1.96
TOP3A-219ENST00000584887 BTBD11A6QL63 1104 aa27.27■■□□□ 1.96
TOP3A-219ENST00000584887 BICDL1Q6ZP65 573 aa27.27■■□□□ 1.96
TOP3A-219ENST00000584887 RTF1Q92541 710 aaKnown RBP27.27■■□□□ 1.96
TOP3A-219ENST00000584887 TEX13AQ9BXU3 409 aaPredicted RBP27.27■■□□□ 1.96
TOP3A-219ENST00000584887 BCL2L12Q9HB09 334 aa27.27■■□□□ 1.96
TOP3A-219ENST00000584887 A0A087WZG4 1122 aa27.26■■□□□ 1.95
TOP3A-219ENST00000584887 KCNQ3O43525 872 aa27.26■■□□□ 1.95
TOP3A-219ENST00000584887 EIF5P55010 431 aaKnown RBP27.25■■□□□ 1.95
TOP3A-219ENST00000584887 MCM10Q7L590 875 aa27.25■■□□□ 1.95
TOP3A-219ENST00000584887 SERPINB2P05120 415 aa27.24■■□□□ 1.95
TOP3A-219ENST00000584887 NPM2Q86SE8 214 aaKnown RBP27.24■■□□□ 1.95
TOP3A-219ENST00000584887 AFDNP55196 1824 aaKnown RBP27.23■■□□□ 1.95
TOP3A-219ENST00000584887 ARFGEF1Q9Y6D6 1849 aa27.23■■□□□ 1.95
TOP3A-219ENST00000584887 A1BGP04217 495 aa27.22■■□□□ 1.95
TOP3A-219ENST00000584887 TBC1D2BQ9UPU7 963 aa27.22■■□□□ 1.95
TOP3A-219ENST00000584887 DCTN1Q14203 1278 aa27.21■■□□□ 1.95
TOP3A-219ENST00000584887 C9orf131Q5VYM1 1079 aa27.21■■□□□ 1.95
TOP3A-219ENST00000584887 IL6STP40189 918 aaPredicted RBP27.18■■□□□ 1.94
TOP3A-219ENST00000584887 TBC1D9BQ66K14 1250 aa27.18■■□□□ 1.94
TOP3A-219ENST00000584887 NRXN2Q9P2S2 1712 aa27.17■■□□□ 1.94
TOP3A-219ENST00000584887 NEFMP07197 916 aa27.17■■□□□ 1.94
TOP3A-219ENST00000584887 PIP4K2AP48426 406 aaPredicted RBP27.17■■□□□ 1.94
TOP3A-219ENST00000584887 C2CD5Q86YS7 1000 aa27.17■■□□□ 1.94
TOP3A-219ENST00000584887 CARMIL3Q8ND23 1372 aa27.17■■□□□ 1.94
TOP3A-219ENST00000584887 KIF3CO14782 793 aa27.16■■□□□ 1.94
TOP3A-219ENST00000584887 RNF181Q9P0P0 153 aa27.16■■□□□ 1.94
TOP3A-219ENST00000584887 SCN7AQ01118 1682 aa27.16■■□□□ 1.94
TOP3A-219ENST00000584887 PRAMEF22A3QJZ6 481 aa27.15■■□□□ 1.94
TOP3A-219ENST00000584887 USP16Q9Y5T5 823 aa27.15■■□□□ 1.94
TOP3A-219ENST00000584887 NPHP1O15259 732 aa27.14■■□□□ 1.94
TOP3A-219ENST00000584887 H0YIN7 160 aa27.13■■□□□ 1.93
TOP3A-219ENST00000584887 HTATSF1O43719 755 aaKnown RBP27.13■■□□□ 1.93
TOP3A-219ENST00000584887 SNRPA1P09661 255 aaKnown RBP27.13■■□□□ 1.93
TOP3A-219ENST00000584887 DZIP3Q86Y13 1208 aaKnown RBP27.13■■□□□ 1.93
TOP3A-219ENST00000584887 CCDC24Q8N4L8 307 aa27.13■■□□□ 1.93
TOP3A-219ENST00000584887 CAMTA2O94983 1202 aa27.12■■□□□ 1.93
TOP3A-219ENST00000584887 TTLL6Q8N841 843 aa27.12■■□□□ 1.93
TOP3A-219ENST00000584887 NMRK2Q9NPI5 230 aa27.12■■□□□ 1.93
TOP3A-219ENST00000584887 RASSF7Q02833 373 aa27.11■■□□□ 1.93
TOP3A-219ENST00000584887 SETDB2Q96T68 719 aa27.1■■□□□ 1.93
TOP3A-219ENST00000584887 MIS18AQ9NYP9 233 aa27.1■■□□□ 1.93
TOP3A-219ENST00000584887 HSPA6P17066 643 aa27.09■■□□□ 1.93
TOP3A-219ENST00000584887 TAF7Q15545 349 aaPredicted RBP27.09■■□□□ 1.93
TOP3A-219ENST00000584887 PRR5LQ6MZQ0 368 aa27.09■■□□□ 1.93
TOP3A-219ENST00000584887 ZNF622Q969S3 477 aaKnown RBP eCLIP27.09■■□□□ 1.93
TOP3A-219ENST00000584887 DLEC1Q9Y238 1755 aa27.09■■□□□ 1.93
TOP3A-219ENST00000584887 CNBD1Q8NA66 436 aa27.08■■□□□ 1.93
TOP3A-219ENST00000584887 PDE6BP35913 854 aa27.06■■□□□ 1.92
TOP3A-219ENST00000584887 BRIP1Q9BX63 1249 aa27.06■■□□□ 1.92
TOP3A-219ENST00000584887 MAPK8IP3Q9UPT6 1336 aa27.06■■□□□ 1.92
TOP3A-219ENST00000584887 ANKRD31Q8N7Z5 1873 aa27.06■■□□□ 1.92
TOP3A-219ENST00000584887 BCORQ6W2J9 1755 aa27.05■■□□□ 1.92
TOP3A-219ENST00000584887 ZNF219Q9P2Y4 722 aaPredicted RBP27.05■■□□□ 1.92
TOP3A-219ENST00000584887 ST5P78524 1137 aa27.04■■□□□ 1.92
TOP3A-219ENST00000584887 NFE2L2Q16236 605 aa27.04■■□□□ 1.92
TOP3A-219ENST00000584887 THUMPD2Q9BTF0 503 aaKnown RBP27.04■■□□□ 1.92
TOP3A-219ENST00000584887 ZNF652Q9Y2D9 606 aa27.04■■□□□ 1.92
TOP3A-219ENST00000584887 KDM2BQ8NHM5 1336 aa27.04■■□□□ 1.92
TOP3A-219ENST00000584887 SBF1O95248 1867 aa27.04■■□□□ 1.92
TOP3A-219ENST00000584887 DLG5Q8TDM6 1919 aa27.04■■□□□ 1.92
TOP3A-219ENST00000584887 TOMM70O94826 608 aa27.03■■□□□ 1.92
TOP3A-219ENST00000584887 C16orf71Q8IYS4 520 aaPredicted RBP27.03■■□□□ 1.92
TOP3A-219ENST00000584887 PLEKHF1Q96S99 279 aa27.03■■□□□ 1.92
TOP3A-219ENST00000584887 NBPF26B4DH59 902 aa27.02■■□□□ 1.92
TOP3A-219ENST00000584887 LMNB1P20700 586 aa27.02■■□□□ 1.92
TOP3A-219ENST00000584887 NBPF10Q6P3W6 841 aaKnown RBP27.02■■□□□ 1.92
TOP3A-219ENST00000584887 NBPF5PQ86XG9 351 aaPredicted RBP27.02■■□□□ 1.92
TOP3A-219ENST00000584887 NBPF15Q8N660 670 aa27.02■■□□□ 1.92
TOP3A-219ENST00000584887 PDZRN3Q9UPQ7 1066 aa27.02■■□□□ 1.92
TOP3A-219ENST00000584887 PNISRQ8TF01 805 aaKnown RBP27.01■■□□□ 1.91
TOP3A-219ENST00000584887 PNNQ9H307 717 aaKnown RBP27.01■■□□□ 1.91
TOP3A-219ENST00000584887 COL11A2P13942 1736 aaPredicted RBP27.01■■□□□ 1.91
TOP3A-219ENST00000584887 C21orf2O43822 256 aa26.99■■□□□ 1.91
TOP3A-219ENST00000584887 CLEC4GQ6UXB4 293 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms