RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 EML3Q32P44 896 aa6.78□□□□□ -1.32
VAPA-208ENST00000584796 PLA2G4EQ3MJ16 856 aa6.78□□□□□ -1.32
VAPA-208ENST00000584796 EDARADDQ8WWZ3 215 aa6.78□□□□□ -1.32
VAPA-208ENST00000584796 ZCCHC2Q9C0B9 1178 aaKnown RBP6.78□□□□□ -1.32
VAPA-208ENST00000584796 ZDHHC3Q9NYG2 299 aa6.78□□□□□ -1.32
VAPA-208ENST00000584796 HCN2Q9UL51 889 aa6.78□□□□□ -1.32
VAPA-208ENST00000584796 SKIP12755 728 aa6.77□□□□□ -1.33
VAPA-208ENST00000584796 HOXB4P17483 251 aaPredicted RBP6.77□□□□□ -1.33
VAPA-208ENST00000584796 NBPF1Q3BBV0 1214 aa6.77□□□□□ -1.33
VAPA-208ENST00000584796 AIDAQ96BJ3 306 aa6.77□□□□□ -1.33
VAPA-208ENST00000584796 POM121Q96HA1 1249 aa6.77□□□□□ -1.33
VAPA-208ENST00000584796 NOD1Q9Y239 953 aa6.77□□□□□ -1.33
VAPA-208ENST00000584796 A0A1W2PNR3 127 aa6.76□□□□□ -1.33
VAPA-208ENST00000584796 ATXN7O15265 892 aaPredicted RBP6.76□□□□□ -1.33
VAPA-208ENST00000584796 ARAFP10398 606 aa6.76□□□□□ -1.33
VAPA-208ENST00000584796 GTF2IP78347 998 aa6.76□□□□□ -1.33
VAPA-208ENST00000584796 NCOA4Q13772 614 aa6.76□□□□□ -1.33
VAPA-208ENST00000584796 GGA1Q9UJY5 639 aa6.76□□□□□ -1.33
VAPA-208ENST00000584796 MKL2Q9ULH7 1088 aa6.76□□□□□ -1.33
VAPA-208ENST00000584796 BACH1O14867 736 aa6.75□□□□□ -1.33
VAPA-208ENST00000584796 EPXP11678 715 aa6.75□□□□□ -1.33
VAPA-208ENST00000584796 TATP17735 454 aaPredicted RBP6.75□□□□□ -1.33
VAPA-208ENST00000584796 TNP2Q05952 138 aa6.75□□□□□ -1.33
VAPA-208ENST00000584796 FAM182BQ5T319 152 aa6.75□□□□□ -1.33
VAPA-208ENST00000584796 WWC1Q8IX03 1113 aa6.75□□□□□ -1.33
VAPA-208ENST00000584796 SPOCK3Q9BQ16 436 aa6.75□□□□□ -1.33
VAPA-208ENST00000584796 ZNF358Q9NW07 568 aa6.75□□□□□ -1.33
VAPA-208ENST00000584796 SCHIP1Q9P0W5 487 aaPredicted RBP6.75□□□□□ -1.33
VAPA-208ENST00000584796 USP17L5A8MUK1 530 aa6.74□□□□□ -1.33
VAPA-208ENST00000584796 MSTNO14793 375 aa6.74□□□□□ -1.33
VAPA-208ENST00000584796 PROCP04070 461 aa6.74□□□□□ -1.33
VAPA-208ENST00000584796 FAM157BP0CG42 384 aa6.74□□□□□ -1.33
VAPA-208ENST00000584796 MAPTP10636 758 aaKnown RBP6.74□□□□□ -1.33
VAPA-208ENST00000584796 EPHA4P54764 986 aa6.74□□□□□ -1.33
VAPA-208ENST00000584796 ARSJQ5FYB0 599 aaPredicted RBP6.74□□□□□ -1.33
VAPA-208ENST00000584796 SAMD5Q5TGI4 173 aa6.74□□□□□ -1.33
VAPA-208ENST00000584796 LINC00114Q6XXX2 140 aa6.74□□□□□ -1.33
VAPA-208ENST00000584796 ALYREFQ86V81 257 aaKnown RBP6.74□□□□□ -1.33
VAPA-208ENST00000584796 ZDHHC1Q8WTX9 485 aa6.74□□□□□ -1.33
VAPA-208ENST00000584796 ZIC5Q96T25 663 aa6.74□□□□□ -1.33
VAPA-208ENST00000584796 CABP1Q9NZU7 370 aa6.74□□□□□ -1.33
VAPA-208ENST00000584796 DCDC2BA2VCK2 349 aa6.73□□□□□ -1.33
VAPA-208ENST00000584796 COL8A1P27658 744 aa6.73□□□□□ -1.33
VAPA-208ENST00000584796 FLIIQ13045 1269 aa6.73□□□□□ -1.33
VAPA-208ENST00000584796 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.73□□□□□ -1.33
VAPA-208ENST00000584796 ADAMTS19Q8TE59 1207 aa6.73□□□□□ -1.33
VAPA-208ENST00000584796 RRAGCQ9HB90 399 aa6.73□□□□□ -1.33
VAPA-208ENST00000584796 AVENQ9NQS1 362 aaPredicted RBP6.73□□□□□ -1.33
VAPA-208ENST00000584796 POM121CA8CG34 1229 aa6.72□□□□□ -1.33
VAPA-208ENST00000584796 NEURL1BA8MQ27 555 aa6.72□□□□□ -1.33
VAPA-208ENST00000584796 RAD21O60216 631 aa6.72□□□□□ -1.33
VAPA-208ENST00000584796 CD33P20138 364 aa6.72□□□□□ -1.33
VAPA-208ENST00000584796 DGKGP49619 791 aa6.72□□□□□ -1.33
VAPA-208ENST00000584796 TEAD4Q15561 434 aa6.72□□□□□ -1.33
VAPA-208ENST00000584796 PLEKHM2Q8IWE5 1019 aa6.72□□□□□ -1.33
VAPA-208ENST00000584796 DEPDC4Q8N2C3 294 aa6.72□□□□□ -1.33
VAPA-208ENST00000584796 BTBD6Q96KE9 485 aa6.72□□□□□ -1.33
VAPA-208ENST00000584796 PARP3Q9Y6F1 533 aa6.72□□□□□ -1.33
VAPA-208ENST00000584796 KRBA1A5PL33 1030 aa6.71□□□□□ -1.34
VAPA-208ENST00000584796 KHNYNO15037 678 aaKnown RBP6.71□□□□□ -1.34
VAPA-208ENST00000584796 EFSO43281 561 aa6.71□□□□□ -1.34
VAPA-208ENST00000584796 AMPD1P23109 780 aa6.71□□□□□ -1.34
VAPA-208ENST00000584796 ADH6P28332 368 aa6.71□□□□□ -1.34
VAPA-208ENST00000584796 TXLNAP40222 546 aa6.71□□□□□ -1.34
VAPA-208ENST00000584796 PSME1Q06323 249 aa6.71□□□□□ -1.34
VAPA-208ENST00000584796 UCN2Q96RP3 112 aa6.71□□□□□ -1.34
VAPA-208ENST00000584796 KLF15Q9UIH9 416 aa6.71□□□□□ -1.34
VAPA-208ENST00000584796 EML1O00423 815 aa6.7□□□□□ -1.34
VAPA-208ENST00000584796 UBTFP17480 764 aaKnown RBP6.7□□□□□ -1.34
VAPA-208ENST00000584796 LAMC2Q13753 1193 aa6.7□□□□□ -1.34
VAPA-208ENST00000584796 ZNF468Q5VIY5 522 aaPredicted RBP6.7□□□□□ -1.34
VAPA-208ENST00000584796 FCHSD1Q86WN1 690 aa6.7□□□□□ -1.34
VAPA-208ENST00000584796 TRIM50Q86XT4 487 aa6.7□□□□□ -1.34
VAPA-208ENST00000584796 SLC9A9Q8IVB4 645 aa6.7□□□□□ -1.34
VAPA-208ENST00000584796 L3MBTL2Q969R5 705 aa6.7□□□□□ -1.34
VAPA-208ENST00000584796 USP17L3A6NCW0 530 aa6.69□□□□□ -1.34
VAPA-208ENST00000584796 USP17L4A6NCW7 530 aa6.69□□□□□ -1.34
VAPA-208ENST00000584796 PIK3R2O00459 728 aa6.69□□□□□ -1.34
VAPA-208ENST00000584796 GNB5O14775 395 aa6.69□□□□□ -1.34
VAPA-208ENST00000584796 ZBTB7BO15156 539 aaPredicted RBP6.69□□□□□ -1.34
VAPA-208ENST00000584796 NOS2P35228 1153 aa6.69□□□□□ -1.34
VAPA-208ENST00000584796 USP17L2Q6R6M4 530 aa6.69□□□□□ -1.34
VAPA-208ENST00000584796 BICDL1Q6ZP65 573 aa6.69□□□□□ -1.34
VAPA-208ENST00000584796 USP17L1Q7RTZ2 530 aa6.69□□□□□ -1.34
VAPA-208ENST00000584796 TNS4Q8IZW8 715 aa6.69□□□□□ -1.34
VAPA-208ENST00000584796 C7orf43Q8WVR3 580 aa6.69□□□□□ -1.34
VAPA-208ENST00000584796 SUV39H2Q9H5I1 410 aa6.69□□□□□ -1.34
VAPA-208ENST00000584796 STRN4Q9NRL3 753 aa6.69□□□□□ -1.34
VAPA-208ENST00000584796 KIAA1024Q9UPX6 916 aa6.69□□□□□ -1.34
VAPA-208ENST00000584796 GPC6Q9Y625 555 aaPredicted RBP6.69□□□□□ -1.34
VAPA-208ENST00000584796 GJA3Q9Y6H8 435 aa6.69□□□□□ -1.34
VAPA-208ENST00000584796 ATP9BO43861 1147 aa6.68□□□□□ -1.34
VAPA-208ENST00000584796 ADAM23O75077 832 aa6.68□□□□□ -1.34
VAPA-208ENST00000584796 CLDN10P78369 228 aa6.68□□□□□ -1.34
VAPA-208ENST00000584796 POTEAQ6S8J7 498 aa6.68□□□□□ -1.34
VAPA-208ENST00000584796 CHSY3Q70JA7 882 aa6.68□□□□□ -1.34
VAPA-208ENST00000584796 TPCN2Q8NHX9 752 aa6.68□□□□□ -1.34
VAPA-208ENST00000584796 MARK1Q9P0L2 795 aa6.68□□□□□ -1.34
VAPA-208ENST00000584796 ATP1A2P50993 1020 aa6.67□□□□□ -1.34
VAPA-208ENST00000584796 HIRAP54198 1017 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms