RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 ZBTB7BO15156 539 aaPredicted RBP17.75■□□□□ 0.43
UBBP4-202ENST00000584755 PDIA6Q15084 440 aa17.74■□□□□ 0.43
UBBP4-202ENST00000584755 DDX21Q9NR30 783 aaKnown RBP eCLIP17.74■□□□□ 0.43
UBBP4-202ENST00000584755 GJD4Q96KN9 370 aaPredicted RBP17.73■□□□□ 0.43
UBBP4-202ENST00000584755 PHAXQ9H814 394 aaKnown RBP17.73■□□□□ 0.43
UBBP4-202ENST00000584755 HYPKQ9NX55 129 aa17.73■□□□□ 0.43
UBBP4-202ENST00000584755 PCDHB15Q9Y5E8 787 aa17.73■□□□□ 0.43
UBBP4-202ENST00000584755 ONECUT3O60422 494 aaPredicted RBP17.72■□□□□ 0.43
UBBP4-202ENST00000584755 FKBP5Q13451 457 aaPredicted RBP17.72■□□□□ 0.43
UBBP4-202ENST00000584755 TRPC5Q9UL62 973 aaPredicted RBP17.72■□□□□ 0.43
UBBP4-202ENST00000584755 ERBB4Q15303 1308 aa17.72■□□□□ 0.43
UBBP4-202ENST00000584755 CCT4P50991 539 aaKnown RBP17.71■□□□□ 0.43
UBBP4-202ENST00000584755 CENPQQ7L2Z9 268 aaPredicted RBP17.71■□□□□ 0.43
UBBP4-202ENST00000584755 ATG3Q9NT62 314 aa17.71■□□□□ 0.43
UBBP4-202ENST00000584755 USP16Q9Y5T5 823 aa17.71■□□□□ 0.43
UBBP4-202ENST00000584755 F6X3S4 739 aa17.7■□□□□ 0.42
UBBP4-202ENST00000584755 PROSER3Q2NL68 480 aa17.7■□□□□ 0.42
UBBP4-202ENST00000584755 LRP10Q7Z4F1 713 aa17.7■□□□□ 0.42
UBBP4-202ENST00000584755 VSIG10Q8N0Z9 540 aa17.7■□□□□ 0.42
UBBP4-202ENST00000584755 ASAP1Q9ULH1 1129 aa17.7■□□□□ 0.42
UBBP4-202ENST00000584755 PRIM1P49642 420 aaKnown RBP17.69■□□□□ 0.42
UBBP4-202ENST00000584755 ANXA1P04083 346 aa17.69■□□□□ 0.42
UBBP4-202ENST00000584755 PELP1Q8IZL8 1130 aaKnown RBP17.69■□□□□ 0.42
UBBP4-202ENST00000584755 ADCY9O60503 1353 aa17.68■□□□□ 0.42
UBBP4-202ENST00000584755 ATP10DQ9P241 1426 aa17.68■□□□□ 0.42
UBBP4-202ENST00000584755 IGHDP01880 384 aa17.68■□□□□ 0.42
UBBP4-202ENST00000584755 PTCD1O75127 700 aaKnown RBP17.67■□□□□ 0.42
UBBP4-202ENST00000584755 TEX13AQ9BXU3 409 aaPredicted RBP17.67■□□□□ 0.42
UBBP4-202ENST00000584755 CICQ96RK0 1608 aaPredicted RBP17.67■□□□□ 0.42
UBBP4-202ENST00000584755 HDAC1Q13547 482 aaPredicted RBP17.66■□□□□ 0.42
UBBP4-202ENST00000584755 DNAAF4Q8WXU2 420 aa17.66■□□□□ 0.42
UBBP4-202ENST00000584755 PI4KAP2A4QPH2 592 aa17.65■□□□□ 0.42
UBBP4-202ENST00000584755 SLC4A10Q6U841 1118 aa17.65■□□□□ 0.42
UBBP4-202ENST00000584755 KSR2Q6VAB6 950 aa17.65■□□□□ 0.42
UBBP4-202ENST00000584755 PI4KAP1Q8N8J0 262 aa17.65■□□□□ 0.42
UBBP4-202ENST00000584755 RWDD1Q9H446 243 aaPredicted RBP17.65■□□□□ 0.42
UBBP4-202ENST00000584755 IBTKQ9P2D0 1353 aaPredicted RBP17.65■□□□□ 0.42
UBBP4-202ENST00000584755 SYTL4Q96C24 671 aaPredicted RBP17.64■□□□□ 0.41
UBBP4-202ENST00000584755 QTRT2Q9H974 415 aaKnown RBP17.64■□□□□ 0.41
UBBP4-202ENST00000584755 TJP1Q07157 1748 aa17.64■□□□□ 0.41
UBBP4-202ENST00000584755 NBPF26B4DH59 902 aa17.63■□□□□ 0.41
UBBP4-202ENST00000584755 DDX58O95786 925 aaKnown RBP17.63■□□□□ 0.41
UBBP4-202ENST00000584755 BEND3Q5T5X7 828 aa17.63■□□□□ 0.41
UBBP4-202ENST00000584755 NBPF14Q5TI25 921 aa17.63■□□□□ 0.41
UBBP4-202ENST00000584755 NBPF10Q6P3W6 841 aaKnown RBP17.63■□□□□ 0.41
UBBP4-202ENST00000584755 NBPF15Q8N660 670 aa17.63■□□□□ 0.41
UBBP4-202ENST00000584755 SLC4A9Q96Q91 983 aa17.63■□□□□ 0.41
UBBP4-202ENST00000584755 NHSQ6T4R5 1651 aa17.63■□□□□ 0.41
UBBP4-202ENST00000584755 ACSBG1Q96GR2 724 aa17.63■□□□□ 0.41
UBBP4-202ENST00000584755 MEIS3Q99687 375 aa17.63■□□□□ 0.41
UBBP4-202ENST00000584755 ZNF831Q5JPB2 1677 aa17.62■□□□□ 0.41
UBBP4-202ENST00000584755 KAT6BQ8WYB5 2073 aa17.62■□□□□ 0.41
UBBP4-202ENST00000584755 MYL6BP14649 208 aa17.62■□□□□ 0.41
UBBP4-202ENST00000584755 DNAJC10Q8IXB1 793 aa17.62■□□□□ 0.41
UBBP4-202ENST00000584755 XAGE3Q8WTP9 111 aa17.62■□□□□ 0.41
UBBP4-202ENST00000584755 SRCIN1Q9C0H9 1055 aa17.62■□□□□ 0.41
UBBP4-202ENST00000584755 MAP3K2Q9Y2U5 619 aa17.62■□□□□ 0.41
UBBP4-202ENST00000584755 A0A0G2JS52 829 aa17.61■□□□□ 0.41
UBBP4-202ENST00000584755 MYT1Q01538 1121 aa17.61■□□□□ 0.41
UBBP4-202ENST00000584755 COPS6Q7L5N1 327 aa17.61■□□□□ 0.41
UBBP4-202ENST00000584755 SEPT12Q8IYM1 358 aa17.61■□□□□ 0.41
UBBP4-202ENST00000584755 KCNQ2O43526 872 aa17.6■□□□□ 0.41
UBBP4-202ENST00000584755 ALDH1L1O75891 902 aa17.6■□□□□ 0.41
UBBP4-202ENST00000584755 STARD3NLO95772 234 aa17.6■□□□□ 0.41
UBBP4-202ENST00000584755 A1BGP04217 495 aa17.6■□□□□ 0.41
UBBP4-202ENST00000584755 GNAI3P08754 354 aa17.6■□□□□ 0.41
UBBP4-202ENST00000584755 FBXO41Q8TF61 875 aa17.6■□□□□ 0.41
UBBP4-202ENST00000584755 SMARCC1Q92922 1105 aaPredicted RBP17.6■□□□□ 0.41
UBBP4-202ENST00000584755 RBM42Q9BTD8 480 aaKnown RBP17.6■□□□□ 0.41
UBBP4-202ENST00000584755 C1orf115Q9H7X2 142 aa17.6■□□□□ 0.41
UBBP4-202ENST00000584755 CYP19A1P11511 503 aaPredicted RBP17.59■□□□□ 0.41
UBBP4-202ENST00000584755 ZNF772Q68DY9 489 aaPredicted RBP17.59■□□□□ 0.41
UBBP4-202ENST00000584755 SIRT2Q8IXJ6 389 aa17.59■□□□□ 0.41
UBBP4-202ENST00000584755 USP44Q9H0E7 712 aa17.59■□□□□ 0.41
UBBP4-202ENST00000584755 ARFGEF2Q9Y6D5 1785 aa17.58■□□□□ 0.41
UBBP4-202ENST00000584755 PIP4K2AP48426 406 aaPredicted RBP17.58■□□□□ 0.41
UBBP4-202ENST00000584755 AIMP1Q12904 312 aaKnown RBP17.58■□□□□ 0.41
UBBP4-202ENST00000584755 ANKRD13DQ6ZTN6 518 aa17.58■□□□□ 0.41
UBBP4-202ENST00000584755 RPAP2Q8IXW5 612 aaPredicted RBP17.58■□□□□ 0.41
UBBP4-202ENST00000584755 SMC5Q8IY18 1101 aa17.58■□□□□ 0.41
UBBP4-202ENST00000584755 ANKRD44Q8N8A2 993 aa17.58■□□□□ 0.41
UBBP4-202ENST00000584755 LINS1Q8NG48 757 aa17.58■□□□□ 0.41
UBBP4-202ENST00000584755 RREB1Q92766 1687 aa17.58■□□□□ 0.41
UBBP4-202ENST00000584755 PALLDQ8WX93 1383 aa17.58■□□□□ 0.4
UBBP4-202ENST00000584755 NUP188Q5SRE5 1749 aa17.58■□□□□ 0.4
UBBP4-202ENST00000584755 SBF2Q86WG5 1849 aa17.57■□□□□ 0.4
UBBP4-202ENST00000584755 PLBD2Q8NHP8 589 aa17.57■□□□□ 0.4
UBBP4-202ENST00000584755 METTL22Q9BUU2 404 aaPredicted RBP17.57■□□□□ 0.4
UBBP4-202ENST00000584755 LOC102724428A0A0B4J2F2 783 aa17.56■□□□□ 0.4
UBBP4-202ENST00000584755 GNAI2P04899 355 aa17.56■□□□□ 0.4
UBBP4-202ENST00000584755 SIK1P57059 783 aa17.56■□□□□ 0.4
UBBP4-202ENST00000584755 CEP85Q6P2H3 762 aa17.56■□□□□ 0.4
UBBP4-202ENST00000584755 RIC3Q7Z5B4 369 aa17.56■□□□□ 0.4
UBBP4-202ENST00000584755 BTAF1O14981 1849 aa17.56■□□□□ 0.4
UBBP4-202ENST00000584755 UTYO14607 1347 aa17.55■□□□□ 0.4
UBBP4-202ENST00000584755 IGKV5-2P06315 115 aa17.55■□□□□ 0.4
UBBP4-202ENST00000584755 RBM6P78332 1123 aaKnown RBP17.55■□□□□ 0.4
UBBP4-202ENST00000584755 TTLL7Q6ZT98 887 aa17.54■□□□□ 0.4
UBBP4-202ENST00000584755 COL5A3P25940 1745 aaPredicted RBP17.54■□□□□ 0.4
UBBP4-202ENST00000584755 BRWD3Q6RI45 1802 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 127 ms