RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 NARFQ9UHQ1 456 aa17.68■□□□□ 0.42
CDK5RAP3-234ENST00000584525 KCPQ6ZWJ8 1503 aa17.67■□□□□ 0.42
CDK5RAP3-234ENST00000584525 AMER1Q5JTC6 1135 aaPredicted RBP17.67■□□□□ 0.42
CDK5RAP3-234ENST00000584525 ZBTB1Q9Y2K1 713 aa17.67■□□□□ 0.42
CDK5RAP3-234ENST00000584525 RASSF7Q02833 373 aa17.66■□□□□ 0.42
CDK5RAP3-234ENST00000584525 KLRG1Q96E93 195 aa17.66■□□□□ 0.42
CDK5RAP3-234ENST00000584525 SERPINB2P05120 415 aa17.65■□□□□ 0.42
CDK5RAP3-234ENST00000584525 CANXP27824 592 aaKnown RBP17.65■□□□□ 0.42
CDK5RAP3-234ENST00000584525 MTHFSDQ2M296 383 aaKnown RBP17.65■□□□□ 0.42
CDK5RAP3-234ENST00000584525 COL15A1P39059 1388 aa17.65■□□□□ 0.42
CDK5RAP3-234ENST00000584525 MYH14Q7Z406 1995 aaKnown RBP17.64■□□□□ 0.41
CDK5RAP3-234ENST00000584525 CC2D1BQ5T0F9 858 aaKnown RBP17.64■□□□□ 0.41
CDK5RAP3-234ENST00000584525 C2CD5Q86YS7 1000 aa17.64■□□□□ 0.41
CDK5RAP3-234ENST00000584525 VSIG10Q8N0Z9 540 aa17.64■□□□□ 0.41
CDK5RAP3-234ENST00000584525 TTLL6Q8N841 843 aa17.64■□□□□ 0.41
CDK5RAP3-234ENST00000584525 SMC1BQ8NDV3 1235 aa17.64■□□□□ 0.41
CDK5RAP3-234ENST00000584525 BCL2L12Q9HB09 334 aa17.64■□□□□ 0.41
CDK5RAP3-234ENST00000584525 DIAPH1O60610 1272 aaKnown RBP17.63■□□□□ 0.41
CDK5RAP3-234ENST00000584525 LMNB1P20700 586 aa17.63■□□□□ 0.41
CDK5RAP3-234ENST00000584525 BICDL1Q6ZP65 573 aa17.63■□□□□ 0.41
CDK5RAP3-234ENST00000584525 TTC5Q8N0Z6 440 aa17.63■□□□□ 0.41
CDK5RAP3-234ENST00000584525 H0YIN7 160 aa17.62■□□□□ 0.41
CDK5RAP3-234ENST00000584525 STARD3NLO95772 234 aa17.62■□□□□ 0.41
CDK5RAP3-234ENST00000584525 TJP1Q07157 1748 aa17.61■□□□□ 0.41
CDK5RAP3-234ENST00000584525 JMYQ8N9B5 988 aa17.61■□□□□ 0.41
CDK5RAP3-234ENST00000584525 ZC3H4Q9UPT8 1303 aaKnown RBP17.61■□□□□ 0.41
CDK5RAP3-234ENST00000584525 A0A087WZG4 1122 aa17.6■□□□□ 0.41
CDK5RAP3-234ENST00000584525 GLTPD2A6NH11 291 aa17.6■□□□□ 0.41
CDK5RAP3-234ENST00000584525 VEGFAP15692 232 aaPredicted RBP17.6■□□□□ 0.41
CDK5RAP3-234ENST00000584525 PRELPP51888 382 aa17.6■□□□□ 0.41
CDK5RAP3-234ENST00000584525 ZNF622Q969S3 477 aaKnown RBP eCLIP17.59■□□□□ 0.411e-12■■□□□ 12.2
CDK5RAP3-234ENST00000584525 ZNF330Q9Y3S2 320 aaPredicted RBP17.59■□□□□ 0.41
CDK5RAP3-234ENST00000584525 MRC1P22897 1456 aa17.58■□□□□ 0.41
CDK5RAP3-234ENST00000584525 EIF5P55010 431 aaKnown RBP17.58■□□□□ 0.4
CDK5RAP3-234ENST00000584525 BRCA1P38398 1863 aaKnown RBP17.58■□□□□ 0.4
CDK5RAP3-234ENST00000584525 U2SURPO15042 1029 aaKnown RBP17.57■□□□□ 0.4
CDK5RAP3-234ENST00000584525 TEFQ10587 303 aa17.57■□□□□ 0.4
CDK5RAP3-234ENST00000584525 COL13A1Q5TAT6 717 aaPredicted RBP17.57■□□□□ 0.4
CDK5RAP3-234ENST00000584525 TBC1D9BQ66K14 1250 aa17.57■□□□□ 0.4
CDK5RAP3-234ENST00000584525 ZNF219Q9P2Y4 722 aaPredicted RBP17.57■□□□□ 0.4
CDK5RAP3-234ENST00000584525 ARFGEF1Q9Y6D6 1849 aa17.56■□□□□ 0.4
CDK5RAP3-234ENST00000584525 CARMIL3Q8ND23 1372 aa17.56■□□□□ 0.4
CDK5RAP3-234ENST00000584525 NFKBIEO00221 500 aa17.56■□□□□ 0.4
CDK5RAP3-234ENST00000584525 PDE6BP35913 854 aa17.56■□□□□ 0.4
CDK5RAP3-234ENST00000584525 ZNF496Q96IT1 587 aaPredicted RBP17.56■□□□□ 0.4
CDK5RAP3-234ENST00000584525 TEX13AQ9BXU3 409 aaPredicted RBP17.56■□□□□ 0.4
CDK5RAP3-234ENST00000584525 TBC1D2BQ9UPU7 963 aa17.56■□□□□ 0.4
CDK5RAP3-234ENST00000584525 ADAMTS7Q9UKP4 1686 aa17.55■□□□□ 0.4
CDK5RAP3-234ENST00000584525 PER1O15534 1290 aaPredicted RBP17.55■□□□□ 0.4
CDK5RAP3-234ENST00000584525 C21orf2O43822 256 aa17.55■□□□□ 0.4
CDK5RAP3-234ENST00000584525 DPY19L2Q6NUT2 758 aa17.55■□□□□ 0.4
CDK5RAP3-234ENST00000584525 ZNF790Q6PG37 636 aa17.55■□□□□ 0.4
CDK5RAP3-234ENST00000584525 NPM2Q86SE8 214 aaKnown RBP17.55■□□□□ 0.4
CDK5RAP3-234ENST00000584525 CCDC24Q8N4L8 307 aa17.55■□□□□ 0.4
CDK5RAP3-234ENST00000584525 IL17REQ8NFR9 667 aa17.55■□□□□ 0.4
CDK5RAP3-234ENST00000584525 GAS2L2Q8NHY3 880 aa17.55■□□□□ 0.4
CDK5RAP3-234ENST00000584525 BRIP1Q9BX63 1249 aa17.55■□□□□ 0.4
CDK5RAP3-234ENST00000584525 NPC1L1Q9UHC9 1359 aa17.54■□□□□ 0.4
CDK5RAP3-234ENST00000584525 SCN11AQ9UI33 1791 aa17.54■□□□□ 0.4
CDK5RAP3-234ENST00000584525 GNAT3A8MTJ3 354 aa17.54■□□□□ 0.4
CDK5RAP3-234ENST00000584525 NPHP1O15259 732 aa17.54■□□□□ 0.4
CDK5RAP3-234ENST00000584525 PDZRN3Q9UPQ7 1066 aa17.54■□□□□ 0.4
CDK5RAP3-234ENST00000584525 HEG1Q9ULI3 1381 aa17.53■□□□□ 0.4
CDK5RAP3-234ENST00000584525 WDR90Q96KV7 1748 aa17.52■□□□□ 0.4
CDK5RAP3-234ENST00000584525 A1BGP04217 495 aa17.52■□□□□ 0.4
CDK5RAP3-234ENST00000584525 ERFEQ4G0M1 354 aa17.52■□□□□ 0.4
CDK5RAP3-234ENST00000584525 PRR5LQ6MZQ0 368 aa17.52■□□□□ 0.4
CDK5RAP3-234ENST00000584525 FMNL2Q96PY5 1086 aa17.52■□□□□ 0.4
CDK5RAP3-234ENST00000584525 SETDB2Q96T68 719 aa17.52■□□□□ 0.4
CDK5RAP3-234ENST00000584525 CAPN15O75808 1086 aa17.51■□□□□ 0.39
CDK5RAP3-234ENST00000584525 IL6STP40189 918 aaPredicted RBP17.51■□□□□ 0.39
CDK5RAP3-234ENST00000584525 DDX10Q13206 875 aaKnown RBP17.51■□□□□ 0.39
CDK5RAP3-234ENST00000584525 CFAP53Q96M91 514 aa17.51■□□□□ 0.39
CDK5RAP3-234ENST00000584525 POTECB2RU33 542 aa17.5■□□□□ 0.39
CDK5RAP3-234ENST00000584525 TNS4Q8IZW8 715 aa17.5■□□□□ 0.39
CDK5RAP3-234ENST00000584525 CNBD1Q8NA66 436 aa17.5■□□□□ 0.39
CDK5RAP3-234ENST00000584525 BTBD11A6QL63 1104 aa17.49■□□□□ 0.39
CDK5RAP3-234ENST00000584525 ST5P78524 1137 aa17.49■□□□□ 0.39
CDK5RAP3-234ENST00000584525 CNKSR1Q969H4 720 aa17.49■□□□□ 0.39
CDK5RAP3-234ENST00000584525 TAOK3Q9H2K8 898 aa17.49■□□□□ 0.39
CDK5RAP3-234ENST00000584525 TNRC6CQ9HCJ0 1690 aaKnown RBP17.48■□□□□ 0.39
CDK5RAP3-234ENST00000584525 KCNQ3O43525 872 aa17.48■□□□□ 0.39
CDK5RAP3-234ENST00000584525 CAMTA2O94983 1202 aa17.48■□□□□ 0.39
CDK5RAP3-234ENST00000584525 NRXN2Q9P2S2 1712 aa17.47■□□□□ 0.39
CDK5RAP3-234ENST00000584525 HSPA1AP0DMV8 641 aaKnown RBP17.47■□□□□ 0.39
CDK5RAP3-234ENST00000584525 HSPA1BP0DMV9 641 aaKnown RBP17.47■□□□□ 0.39
CDK5RAP3-234ENST00000584525 STYK1Q6J9G0 422 aa17.47■□□□□ 0.39
CDK5RAP3-234ENST00000584525 DZIP3Q86Y13 1208 aaKnown RBP17.47■□□□□ 0.39
CDK5RAP3-234ENST00000584525 SRGNP10124 158 aa17.46■□□□□ 0.39
CDK5RAP3-234ENST00000584525 PRPF40BQ6NWY9 871 aaKnown RBP17.46■□□□□ 0.39
CDK5RAP3-234ENST00000584525 MASTLQ96GX5 879 aa17.46■□□□□ 0.39
CDK5RAP3-234ENST00000584525 PHACTR3Q96KR7 559 aa17.46■□□□□ 0.39
CDK5RAP3-234ENST00000584525 PCNTO95613 3336 aa17.45■□□□□ 0.38
CDK5RAP3-234ENST00000584525 DDNO94850 711 aaPredicted RBP17.45■□□□□ 0.38
CDK5RAP3-234ENST00000584525 PRKAR2BP31323 418 aa17.45■□□□□ 0.38
CDK5RAP3-234ENST00000584525 PIP4K2AP48426 406 aaPredicted RBP17.45■□□□□ 0.38
CDK5RAP3-234ENST00000584525 SOGA3Q5TF21 947 aa17.45■□□□□ 0.38
CDK5RAP3-234ENST00000584525 CHADLQ6NUI6 762 aa17.45■□□□□ 0.38
CDK5RAP3-234ENST00000584525 USP16Q9Y5T5 823 aa17.45■□□□□ 0.38
CDK5RAP3-234ENST00000584525 LTBP3Q9NS15 1303 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms