RNA–Protein interactions for RNA: ENST00000584216.5

COPS3-218, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-218ENST00000584216 NARFQ9UHQ1 456 aa18.21■□□□□ 0.51
COPS3-218ENST00000584216 COL15A1P39059 1388 aa18.2■□□□□ 0.5
COPS3-218ENST00000584216 CYP19A1P11511 503 aaPredicted RBP18.2■□□□□ 0.5
COPS3-218ENST00000584216 TNS4Q8IZW8 715 aa18.2■□□□□ 0.5
COPS3-218ENST00000584216 CLSPNQ9HAW4 1339 aa18.2■□□□□ 0.5
COPS3-218ENST00000584216 RASSF7Q02833 373 aa18.19■□□□□ 0.5
COPS3-218ENST00000584216 TRIM26Q12899 539 aaPredicted RBP18.19■□□□□ 0.5
COPS3-218ENST00000584216 NFIXQ14938 502 aa18.19■□□□□ 0.5
COPS3-218ENST00000584216 KNSTRNQ9Y448 316 aa18.19■□□□□ 0.5
COPS3-218ENST00000584216 H0YIN7 160 aa18.18■□□□□ 0.5
COPS3-218ENST00000584216 SERPINB2P05120 415 aa18.18■□□□□ 0.5
COPS3-218ENST00000584216 IL13P35225 146 aa18.18■□□□□ 0.5
COPS3-218ENST00000584216 VSIG10Q8N0Z9 540 aa18.18■□□□□ 0.5
COPS3-218ENST00000584216 DPY19L2Q6NUT2 758 aa18.17■□□□□ 0.5
COPS3-218ENST00000584216 PDZRN3Q9UPQ7 1066 aa18.17■□□□□ 0.5
COPS3-218ENST00000584216 MRC1P22897 1456 aa18.17■□□□□ 0.5
COPS3-218ENST00000584216 ADAMTS7Q9UKP4 1686 aa18.17■□□□□ 0.5
COPS3-218ENST00000584216 RNMTO43148 476 aaKnown RBP18.16■□□□□ 0.5
COPS3-218ENST00000584216 C2CD5Q86YS7 1000 aa18.16■□□□□ 0.5
COPS3-218ENST00000584216 ZBTB1Q9Y2K1 713 aa18.16■□□□□ 0.5
COPS3-218ENST00000584216 SCN11AQ9UI33 1791 aa18.15■□□□□ 0.5
COPS3-218ENST00000584216 A0A087WZG4 1122 aa18.15■□□□□ 0.5
COPS3-218ENST00000584216 STARD3NLO95772 234 aa18.15■□□□□ 0.5
COPS3-218ENST00000584216 CAPN15O75808 1086 aa18.14■□□□□ 0.49
COPS3-218ENST00000584216 PRELPP51888 382 aa18.14■□□□□ 0.49
COPS3-218ENST00000584216 SLC39A6Q13433 755 aa18.14■□□□□ 0.49
COPS3-218ENST00000584216 LGR6Q9HBX8 967 aa18.14■□□□□ 0.49
COPS3-218ENST00000584216 HSPA5P11021 654 aaKnown RBP18.13■□□□□ 0.49
COPS3-218ENST00000584216 TTC5Q8N0Z6 440 aa18.13■□□□□ 0.49
COPS3-218ENST00000584216 SBF1O95248 1867 aa18.13■□□□□ 0.49
COPS3-218ENST00000584216 NRXN2Q9P2S2 1712 aa18.12■□□□□ 0.49
COPS3-218ENST00000584216 HSPA1AP0DMV8 641 aaKnown RBP18.12■□□□□ 0.49
COPS3-218ENST00000584216 HSPA1BP0DMV9 641 aaKnown RBP18.12■□□□□ 0.49
COPS3-218ENST00000584216 PDE6BP35913 854 aa18.12■□□□□ 0.49
COPS3-218ENST00000584216 BCL2L12Q9HB09 334 aa18.12■□□□□ 0.49
COPS3-218ENST00000584216 NFKBIEO00221 500 aa18.11■□□□□ 0.49
COPS3-218ENST00000584216 CANXP27824 592 aaKnown RBP18.11■□□□□ 0.49
COPS3-218ENST00000584216 DLEC1Q9Y238 1755 aa18.1■□□□□ 0.49
COPS3-218ENST00000584216 BICDL1Q6ZP65 573 aa18.1■□□□□ 0.49
COPS3-218ENST00000584216 NPM2Q86SE8 214 aaKnown RBP18.1■□□□□ 0.49
COPS3-218ENST00000584216 ZNF622Q969S3 477 aaKnown RBP eCLIP18.1■□□□□ 0.49
COPS3-218ENST00000584216 BRIP1Q9BX63 1249 aa18.1■□□□□ 0.49
COPS3-218ENST00000584216 TEX13AQ9BXU3 409 aaPredicted RBP18.1■□□□□ 0.49
COPS3-218ENST00000584216 HMOX1P09601 288 aa18.09■□□□□ 0.49
COPS3-218ENST00000584216 ERFEQ4G0M1 354 aa18.09■□□□□ 0.49
COPS3-218ENST00000584216 CARMIL3Q8ND23 1372 aa18.08■□□□□ 0.49
COPS3-218ENST00000584216 AFDNP55196 1824 aaKnown RBP18.08■□□□□ 0.48
COPS3-218ENST00000584216 EIF5P55010 431 aaKnown RBP18.08■□□□□ 0.48
COPS3-218ENST00000584216 MTHFSDQ2M296 383 aaKnown RBP18.08■□□□□ 0.48
COPS3-218ENST00000584216 SOGA3Q5TF21 947 aa18.08■□□□□ 0.48
COPS3-218ENST00000584216 TIAM2Q8IVF5 1701 aa18.08■□□□□ 0.48
COPS3-218ENST00000584216 LTBP3Q9NS15 1303 aa18.07■□□□□ 0.48
COPS3-218ENST00000584216 NPHP1O15259 732 aa18.07■□□□□ 0.48
COPS3-218ENST00000584216 CREBZFQ9NS37 354 aa18.07■□□□□ 0.48
COPS3-218ENST00000584216 C21orf2O43822 256 aa18.06■□□□□ 0.48
COPS3-218ENST00000584216 DIAPH1O60610 1272 aaKnown RBP18.06■□□□□ 0.48
COPS3-218ENST00000584216 TEFQ10587 303 aa18.06■□□□□ 0.48
COPS3-218ENST00000584216 AMER1Q5JTC6 1135 aaPredicted RBP18.06■□□□□ 0.48
COPS3-218ENST00000584216 CNKSR1Q969H4 720 aa18.06■□□□□ 0.48
COPS3-218ENST00000584216 TAOK3Q9H2K8 898 aa18.06■□□□□ 0.48
COPS3-218ENST00000584216 POTECB2RU33 542 aa18.05■□□□□ 0.48
COPS3-218ENST00000584216 TBC1D9BQ66K14 1250 aa18.05■□□□□ 0.48
COPS3-218ENST00000584216 CHADLQ6NUI6 762 aa18.05■□□□□ 0.48
COPS3-218ENST00000584216 IL6STP40189 918 aaPredicted RBP18.04■□□□□ 0.48
COPS3-218ENST00000584216 ST5P78524 1137 aa18.04■□□□□ 0.48
COPS3-218ENST00000584216 PRR5LQ6MZQ0 368 aa18.04■□□□□ 0.48
COPS3-218ENST00000584216 CNBD1Q8NA66 436 aa18.04■□□□□ 0.48
COPS3-218ENST00000584216 SETDB2Q96T68 719 aa18.04■□□□□ 0.48
COPS3-218ENST00000584216 ZNF330Q9Y3S2 320 aaPredicted RBP18.04■□□□□ 0.48
COPS3-218ENST00000584216 PCNTO95613 3336 aa18.04■□□□□ 0.48
COPS3-218ENST00000584216 HEG1Q9ULI3 1381 aa18.04■□□□□ 0.48
COPS3-218ENST00000584216 IQCA1LA6NCM1 817 aa18.03■□□□□ 0.48
COPS3-218ENST00000584216 STYK1Q6J9G0 422 aa18.03■□□□□ 0.48
COPS3-218ENST00000584216 ZNF790Q6PG37 636 aa18.03■□□□□ 0.48
COPS3-218ENST00000584216 GAS2L2Q8NHY3 880 aa18.03■□□□□ 0.48
COPS3-218ENST00000584216 ZNF219Q9P2Y4 722 aaPredicted RBP18.03■□□□□ 0.48
COPS3-218ENST00000584216 ZNF496Q96IT1 587 aaPredicted RBP18.02■□□□□ 0.48
COPS3-218ENST00000584216 FMNL2Q96PY5 1086 aa18.02■□□□□ 0.48
COPS3-218ENST00000584216 PCGF6Q9BYE7 350 aa18.02■□□□□ 0.48
COPS3-218ENST00000584216 UBR2Q8IWV8 1755 aa18.02■□□□□ 0.47
COPS3-218ENST00000584216 GNAT3A8MTJ3 354 aa18.01■□□□□ 0.47
COPS3-218ENST00000584216 MASTLQ96GX5 879 aa18.01■□□□□ 0.47
COPS3-218ENST00000584216 TBC1D2BQ9UPU7 963 aa18.01■□□□□ 0.47
COPS3-218ENST00000584216 SCN7AQ01118 1682 aa18.01■□□□□ 0.47
COPS3-218ENST00000584216 PRPF40BQ6NWY9 871 aaKnown RBP18■□□□□ 0.47
COPS3-218ENST00000584216 MKRN1Q9UHC7 482 aaKnown RBP18■□□□□ 0.47
COPS3-218ENST00000584216 DDNO94850 711 aaPredicted RBP17.99■□□□□ 0.47
COPS3-218ENST00000584216 SRGNP10124 158 aa17.99■□□□□ 0.47
COPS3-218ENST00000584216 LDHDQ86WU2 507 aa17.99■□□□□ 0.47
COPS3-218ENST00000584216 ZNF652Q9Y2D9 606 aa17.98■□□□□ 0.47
COPS3-218ENST00000584216 CNTNAP1P78357 1384 aa17.97■□□□□ 0.47
COPS3-218ENST00000584216 CAMTA2O94983 1202 aa17.97■□□□□ 0.47
COPS3-218ENST00000584216 CCDC93Q567U6 631 aa17.97■□□□□ 0.47
COPS3-218ENST00000584216 DZIP3Q86Y13 1208 aaKnown RBP17.97■□□□□ 0.47
COPS3-218ENST00000584216 CCDC24Q8N4L8 307 aa17.97■□□□□ 0.47
COPS3-218ENST00000584216 IL17REQ8NFR9 667 aa17.97■□□□□ 0.47
COPS3-218ENST00000584216 AIDAQ96BJ3 306 aa17.97■□□□□ 0.47
COPS3-218ENST00000584216 L3MBTL3Q96JM7 780 aaPredicted RBP17.97■□□□□ 0.47
COPS3-218ENST00000584216 U2SURPO15042 1029 aaKnown RBP17.96■□□□□ 0.47
COPS3-218ENST00000584216 CLEC4GQ6UXB4 293 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms