RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 SGSM3Q96HU1 749 aa14.36□□□□□ -0.11
CDK5RAP3-232ENST00000584168 SSH2Q76I76 1423 aa14.35□□□□□ -0.11
CDK5RAP3-232ENST00000584168 PRKAR2BP31323 418 aa14.35□□□□□ -0.11
CDK5RAP3-232ENST00000584168 HNRNPH2P55795 449 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-232ENST00000584168 CTNNA3Q9UI47 895 aa14.35□□□□□ -0.11
CDK5RAP3-232ENST00000584168 MAP2P11137 1827 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-232ENST00000584168 ZNF445P59923 1031 aa14.35□□□□□ -0.11
CDK5RAP3-232ENST00000584168 ZC3H6P61129 1189 aaKnown RBP14.35□□□□□ -0.11
CDK5RAP3-232ENST00000584168 USHBP1Q8N6Y0 703 aa14.35□□□□□ -0.11
CDK5RAP3-232ENST00000584168 MORC2Q9Y6X9 1032 aaPredicted RBP14.35□□□□□ -0.11
CDK5RAP3-232ENST00000584168 ANKRD26Q9UPS8 1709 aa14.35□□□□□ -0.11
CDK5RAP3-232ENST00000584168 SETQ01105 290 aaPredicted RBP14.34□□□□□ -0.11
CDK5RAP3-232ENST00000584168 EIF4A2Q14240 407 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP3-232ENST00000584168 CREBRFQ8IUR6 639 aa14.34□□□□□ -0.11
CDK5RAP3-232ENST00000584168 PANK1Q8TE04 598 aa14.34□□□□□ -0.11
CDK5RAP3-232ENST00000584168 PSMD1Q99460 953 aa14.34□□□□□ -0.11
CDK5RAP3-232ENST00000584168 THUMPD2Q9BTF0 503 aaKnown RBP14.34□□□□□ -0.11
CDK5RAP3-232ENST00000584168 TOMM22Q9NS69 142 aa14.34□□□□□ -0.11
CDK5RAP3-232ENST00000584168 COG6Q9Y2V7 657 aa14.34□□□□□ -0.11
CDK5RAP3-232ENST00000584168 IL13P35225 146 aa14.34□□□□□ -0.11
CDK5RAP3-232ENST00000584168 PDE3AQ14432 1141 aa14.34□□□□□ -0.11
CDK5RAP3-232ENST00000584168 RBSNQ9H1K0 784 aa14.34□□□□□ -0.11
CDK5RAP3-232ENST00000584168 TDO2P48775 406 aa14.33□□□□□ -0.12
CDK5RAP3-232ENST00000584168 CLUAP1Q96AJ1 413 aa14.33□□□□□ -0.12
CDK5RAP3-232ENST00000584168 RUNDC1Q96C34 613 aa14.33□□□□□ -0.12
CDK5RAP3-232ENST00000584168 TTC21AQ8NDW8 1320 aa14.32□□□□□ -0.12
CDK5RAP3-232ENST00000584168 TTC36A6NLP5 189 aa14.32□□□□□ -0.12
CDK5RAP3-232ENST00000584168 NBPF9Q3BBW0 867 aa14.32□□□□□ -0.12
CDK5RAP3-232ENST00000584168 SULT6B1Q6IMI4 303 aa14.32□□□□□ -0.12
CDK5RAP3-232ENST00000584168 SLAIN2Q9P270 581 aa14.32□□□□□ -0.12
CDK5RAP3-232ENST00000584168 SHPRHQ149N8 1683 aa14.32□□□□□ -0.12
CDK5RAP3-232ENST00000584168 KIF1CO43896 1103 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-232ENST00000584168 KLHL40Q2TBA0 621 aa14.32□□□□□ -0.12
CDK5RAP3-232ENST00000584168 DNAJC21Q5F1R6 531 aaKnown RBP14.32□□□□□ -0.12
CDK5RAP3-232ENST00000584168 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.32□□□□□ -0.12
CDK5RAP3-232ENST00000584168 OVOS2A0A0J9YW53 1432 aa14.32□□□□□ -0.12
CDK5RAP3-232ENST00000584168 OVOS2Q6IE36 1432 aa14.32□□□□□ -0.12
CDK5RAP3-232ENST00000584168 NOLC1Q14978 699 aaKnown RBP eCLIP14.31□□□□□ -0.12
CDK5RAP3-232ENST00000584168 PIBF1Q8WXW3 757 aa14.31□□□□□ -0.12
CDK5RAP3-232ENST00000584168 BRINP3Q76B58 766 aa14.31□□□□□ -0.12
CDK5RAP3-232ENST00000584168 KRT222Q8N1A0 295 aa14.31□□□□□ -0.12
CDK5RAP3-232ENST00000584168 DDIT3P35638 169 aa14.3□□□□□ -0.12
CDK5RAP3-232ENST00000584168 DCTN1Q14203 1278 aa14.3□□□□□ -0.12
CDK5RAP3-232ENST00000584168 PLEKHF1Q96S99 279 aa14.3□□□□□ -0.12
CDK5RAP3-232ENST00000584168 COL3A1P02461 1466 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP3-232ENST00000584168 MAPK8IP3Q9UPT6 1336 aa14.3□□□□□ -0.12
CDK5RAP3-232ENST00000584168 CTIFO43310 598 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-232ENST00000584168 TNNT1P13805 278 aa14.3□□□□□ -0.12
CDK5RAP3-232ENST00000584168 CASQ1P31415 396 aa14.3□□□□□ -0.12
CDK5RAP3-232ENST00000584168 DDX49Q9Y6V7 483 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-232ENST00000584168 FAM83GA6ND36 823 aa14.29□□□□□ -0.12
CDK5RAP3-232ENST00000584168 ZNF853P0CG23 659 aa14.29□□□□□ -0.12
CDK5RAP3-232ENST00000584168 GYS2P54840 703 aa14.29□□□□□ -0.12
CDK5RAP3-232ENST00000584168 CHRNA2Q15822 529 aa14.29□□□□□ -0.12
CDK5RAP3-232ENST00000584168 DIAPH3Q9NSV4 1193 aa14.29□□□□□ -0.12
CDK5RAP3-232ENST00000584168 PIK3C2AO00443 1686 aa14.29□□□□□ -0.12
CDK5RAP3-232ENST00000584168 FKBP5Q13451 457 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-232ENST00000584168 LRRC59Q96AG4 307 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-232ENST00000584168 CIZ1Q9ULV3 898 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-232ENST00000584168 IQSEC2Q5JU85 1478 aa14.29□□□□□ -0.12
CDK5RAP3-232ENST00000584168 GCP02774 474 aa14.28□□□□□ -0.12
CDK5RAP3-232ENST00000584168 NBPF10Q6P3W6 841 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-232ENST00000584168 TSR2Q969E8 191 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-232ENST00000584168 SUFUQ9UMX1 484 aa14.28□□□□□ -0.12
CDK5RAP3-232ENST00000584168 PNPLA6Q8IY17 1366 aa14.28□□□□□ -0.12
CDK5RAP3-232ENST00000584168 GOLGA6L6A8MZA4 724 aa14.28□□□□□ -0.12
CDK5RAP3-232ENST00000584168 GOLGA6L22H0YM25 854 aa14.28□□□□□ -0.12
CDK5RAP3-232ENST00000584168 RIOK3O14730 519 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-232ENST00000584168 TMPOP42166 694 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-232ENST00000584168 RAB3GAP1Q15042 981 aa14.28□□□□□ -0.12
CDK5RAP3-232ENST00000584168 HSCBQ8IWL3 235 aa14.28□□□□□ -0.12
CDK5RAP3-232ENST00000584168 CXorf56Q9H5V9 222 aa14.28□□□□□ -0.12
CDK5RAP3-232ENST00000584168 PRDM16Q9HAZ2 1276 aa14.28□□□□□ -0.12
CDK5RAP3-232ENST00000584168 MNS1Q8NEH6 495 aa14.28□□□□□ -0.12
CDK5RAP3-232ENST00000584168 MED4Q9NPJ6 270 aa14.28□□□□□ -0.12
CDK5RAP3-232ENST00000584168 TRPM3Q9HCF6 1732 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-232ENST00000584168 NPHP3Q7Z494 1330 aa14.27□□□□□ -0.12
CDK5RAP3-232ENST00000584168 RAD50Q92878 1312 aa14.27□□□□□ -0.12
CDK5RAP3-232ENST00000584168 HOXC9P31274 260 aa14.27□□□□□ -0.12
CDK5RAP3-232ENST00000584168 CYP2C19P33261 490 aa14.27□□□□□ -0.12
CDK5RAP3-232ENST00000584168 PIP4K2BP78356 416 aa14.27□□□□□ -0.12
CDK5RAP3-232ENST00000584168 RBM28Q9NW13 759 aaKnown RBP14.27□□□□□ -0.12
CDK5RAP3-232ENST00000584168 AXIN2Q9Y2T1 843 aa14.27□□□□□ -0.12
CDK5RAP3-232ENST00000584168 USP54Q70EL1 1684 aa14.27□□□□□ -0.13
CDK5RAP3-232ENST00000584168 CCDC189A1A4V9 331 aa14.27□□□□□ -0.13
CDK5RAP3-232ENST00000584168 SSR1P43307 286 aaKnown RBP14.27□□□□□ -0.13
CDK5RAP3-232ENST00000584168 CHAF1AQ13111 956 aaPredicted RBP14.27□□□□□ -0.13
CDK5RAP3-232ENST00000584168 USP31Q70CQ4 1352 aa14.26□□□□□ -0.13
CDK5RAP3-232ENST00000584168 RARSP54136 660 aaKnown RBP14.26□□□□□ -0.13
CDK5RAP3-232ENST00000584168 EYA1Q99502 592 aa14.26□□□□□ -0.13
CDK5RAP3-232ENST00000584168 AATKQ6ZMQ8 1374 aa14.26□□□□□ -0.13
CDK5RAP3-232ENST00000584168 ZSCAN23Q3MJ62 389 aa14.26□□□□□ -0.13
CDK5RAP3-232ENST00000584168 KIF18AQ8NI77 898 aa14.26□□□□□ -0.13
CDK5RAP3-232ENST00000584168 TRIM35Q9UPQ4 493 aa14.26□□□□□ -0.13
CDK5RAP3-232ENST00000584168 ZBTB12Q9Y330 459 aaPredicted RBP14.26□□□□□ -0.13
CDK5RAP3-232ENST00000584168 JRKLQ9Y4A0 524 aa14.26□□□□□ -0.13
CDK5RAP3-232ENST00000584168 NCBP1Q09161 790 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-232ENST00000584168 CALR3Q96L12 384 aaKnown RBP14.25□□□□□ -0.13
CDK5RAP3-232ENST00000584168 DRC1Q96MC2 740 aa14.25□□□□□ -0.13
CDK5RAP3-232ENST00000584168 PEAK1Q9H792 1746 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms