RNA–Protein interactions for RNA: ENST00000584049.5

BDNF-219, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best)

Gene BDNF, Length 4,030 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-219ENST00000584049 SBNO1A3KN83 1393 aa10.46□□□□□ -0.73
BDNF-219ENST00000584049 SGSM2O43147 1006 aa10.46□□□□□ -0.73
BDNF-219ENST00000584049 ADCY5O95622 1261 aa10.46□□□□□ -0.73
BDNF-219ENST00000584049 USP25Q9UHP3 1055 aa10.46□□□□□ -0.73
BDNF-219ENST00000584049 NCKAP5LQ9HCH0 1330 aa10.46□□□□□ -0.74
BDNF-219ENST00000584049 FLT4P35916 1363 aa10.46□□□□□ -0.74
BDNF-219ENST00000584049 MTHFSDQ2M296 383 aaKnown RBP10.46□□□□□ -0.74
BDNF-219ENST00000584049 HSP90AB2PQ58FF8 381 aa10.46□□□□□ -0.74
BDNF-219ENST00000584049 DNTTIP2Q5QJE6 756 aaKnown RBP10.45□□□□□ -0.74
BDNF-219ENST00000584049 NOL8Q76FK4 1167 aaKnown RBP10.45□□□□□ -0.74
BDNF-219ENST00000584049 OSCARQ8IYS5 282 aa10.45□□□□□ -0.74
BDNF-219ENST00000584049 FUCA2Q9BTY2 467 aa10.45□□□□□ -0.74
BDNF-219ENST00000584049 GDPD2Q9HCC8 539 aa10.45□□□□□ -0.74
BDNF-219ENST00000584049 TTC21AQ8NDW8 1320 aa10.45□□□□□ -0.74
BDNF-219ENST00000584049 STX6O43752 255 aa10.45□□□□□ -0.74
BDNF-219ENST00000584049 KDM4AO75164 1064 aa10.45□□□□□ -0.74
BDNF-219ENST00000584049 PDIA4P13667 645 aaKnown RBP10.45□□□□□ -0.74
BDNF-219ENST00000584049 UNC5CLQ8IV45 518 aa10.45□□□□□ -0.74
BDNF-219ENST00000584049 LIMCH1Q9UPQ0 1083 aa10.45□□□□□ -0.74
BDNF-219ENST00000584049 IGSF1Q8N6C5 1336 aa10.45□□□□□ -0.74
BDNF-219ENST00000584049 F13A1P00488 732 aa10.45□□□□□ -0.74
BDNF-219ENST00000584049 LRRFIP2Q9Y608 721 aaKnown RBP10.45□□□□□ -0.74
BDNF-219ENST00000584049 SNX14Q9Y5W7 946 aa10.44□□□□□ -0.74
BDNF-219ENST00000584049 ACEP12821 1306 aa10.44□□□□□ -0.74
BDNF-219ENST00000584049 MAP3K5Q99683 1374 aa10.44□□□□□ -0.74
BDNF-219ENST00000584049 POLA2Q14181 598 aa10.44□□□□□ -0.74
BDNF-219ENST00000584049 LSG1Q9H089 658 aaKnown RBP10.44□□□□□ -0.74
BDNF-219ENST00000584049 CNPY2Q9Y2B0 182 aa10.44□□□□□ -0.74
BDNF-219ENST00000584049 USP42Q9H9J4 1324 aaKnown RBP10.44□□□□□ -0.74
BDNF-219ENST00000584049 PTPRUQ92729 1446 aa10.44□□□□□ -0.74
BDNF-219ENST00000584049 UBTFL1P0CB47 393 aaPredicted RBP10.44□□□□□ -0.74
BDNF-219ENST00000584049 UTP14CQ5TAP6 766 aaKnown RBP10.44□□□□□ -0.74
BDNF-219ENST00000584049 MIS18AQ9NYP9 233 aa10.44□□□□□ -0.74
BDNF-219ENST00000584049 HCLS1P14317 486 aaPredicted RBP10.43□□□□□ -0.74
BDNF-219ENST00000584049 SYT1P21579 422 aa10.43□□□□□ -0.74
BDNF-219ENST00000584049 CNTROBQ8N137 903 aa10.43□□□□□ -0.74
BDNF-219ENST00000584049 PI4K2BQ8TCG2 481 aa10.43□□□□□ -0.74
BDNF-219ENST00000584049 SMC3Q9UQE7 1217 aa10.43□□□□□ -0.74
BDNF-219ENST00000584049 RIMS1Q86UR5 1692 aaKnown RBP10.43□□□□□ -0.74
BDNF-219ENST00000584049 USP44Q9H0E7 712 aa10.43□□□□□ -0.74
BDNF-219ENST00000584049 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.43□□□□□ -0.74
BDNF-219ENST00000584049 ZSCAN31Q96LW9 406 aaPredicted RBP10.43□□□□□ -0.74
BDNF-219ENST00000584049 SH2B1Q9NRF2 756 aaPredicted RBP10.43□□□□□ -0.74
BDNF-219ENST00000584049 KIF3AQ9Y496 699 aa10.43□□□□□ -0.74
BDNF-219ENST00000584049 CHD2O14647 1828 aaKnown RBP10.43□□□□□ -0.74
BDNF-219ENST00000584049 AK2P54819 239 aa10.42□□□□□ -0.74
BDNF-219ENST00000584049 KIF1BPQ96EK5 621 aa10.42□□□□□ -0.74
BDNF-219ENST00000584049 IL25Q9H293 177 aa10.42□□□□□ -0.74
BDNF-219ENST00000584049 DIAPH3Q9NSV4 1193 aa10.42□□□□□ -0.74
BDNF-219ENST00000584049 ROBO2Q9HCK4 1378 aa10.42□□□□□ -0.74
BDNF-219ENST00000584049 GOLGA6L6A8MZA4 724 aa10.42□□□□□ -0.74
BDNF-219ENST00000584049 FOXO3O43524 673 aa10.42□□□□□ -0.74
BDNF-219ENST00000584049 RUFY3Q7L099 469 aa10.42□□□□□ -0.74
BDNF-219ENST00000584049 TM6SF1Q9BZW5 370 aa10.42□□□□□ -0.74
BDNF-219ENST00000584049 CEP170BQ9Y4F5 1589 aaPredicted RBP10.42□□□□□ -0.74
BDNF-219ENST00000584049 HSP90AB4PQ58FF6 505 aa10.42□□□□□ -0.74
BDNF-219ENST00000584049 PLPPR3Q6T4P5 718 aa10.42□□□□□ -0.74
BDNF-219ENST00000584049 TTC12Q9H892 705 aaPredicted RBP10.42□□□□□ -0.74
BDNF-219ENST00000584049 ZNF710Q8N1W2 664 aa10.42□□□□□ -0.74
BDNF-219ENST00000584049 KIAA1524Q8TCG1 905 aa10.42□□□□□ -0.74
BDNF-219ENST00000584049 RHPN1Q8TCX5 695 aa10.42□□□□□ -0.74
BDNF-219ENST00000584049 KCNB2Q92953 911 aa10.42□□□□□ -0.74
BDNF-219ENST00000584049 TTC41PQ6P2S7 1318 aa10.41□□□□□ -0.74
BDNF-219ENST00000584049 CCDC171Q6TFL3 1326 aa10.41□□□□□ -0.74
BDNF-219ENST00000584049 FOXD4L6Q3SYB3 417 aaPredicted RBP10.41□□□□□ -0.74
BDNF-219ENST00000584049 VPS53Q5VIR6 699 aa10.41□□□□□ -0.74
BDNF-219ENST00000584049 FOXD4L3Q6VB84 417 aaPredicted RBP10.41□□□□□ -0.74
BDNF-219ENST00000584049 RUFY2Q8WXA3 655 aa10.41□□□□□ -0.74
BDNF-219ENST00000584049 GNAT3A8MTJ3 354 aa10.41□□□□□ -0.74
BDNF-219ENST00000584049 CHMP4AQ9BY43 222 aa10.41□□□□□ -0.74
BDNF-219ENST00000584049 CHAF1AQ13111 956 aaPredicted RBP10.4□□□□□ -0.74
BDNF-219ENST00000584049 ZNF830Q96NB3 372 aaPredicted RBP10.4□□□□□ -0.74
BDNF-219ENST00000584049 MTMR6Q9Y217 621 aa10.4□□□□□ -0.74
BDNF-219ENST00000584049 FIBPO43427 364 aa10.4□□□□□ -0.74
BDNF-219ENST00000584049 CCDC192P0DO97 292 aa10.4□□□□□ -0.74
BDNF-219ENST00000584049 DMTNQ08495 405 aa10.4□□□□□ -0.74
BDNF-219ENST00000584049 IL1RAPL2Q9NP60 686 aa10.4□□□□□ -0.74
BDNF-219ENST00000584049 HYPKQ9NX55 129 aa10.4□□□□□ -0.74
BDNF-219ENST00000584049 ADAMTS13Q76LX8 1427 aa10.4□□□□□ -0.74
BDNF-219ENST00000584049 SURF6O75683 361 aaKnown RBP10.4□□□□□ -0.75
BDNF-219ENST00000584049 PPP1R42Q7Z4L9 355 aa10.4□□□□□ -0.75
BDNF-219ENST00000584049 NUTM1Q86Y26 1132 aa10.4□□□□□ -0.75
BDNF-219ENST00000584049 RASEFQ8IZ41 740 aa10.4□□□□□ -0.75
BDNF-219ENST00000584049 EYA1Q99502 592 aa10.4□□□□□ -0.75
BDNF-219ENST00000584049 ELP1O95163 1332 aa10.39□□□□□ -0.75
BDNF-219ENST00000584049 GLRX3O76003 335 aaKnown RBP10.39□□□□□ -0.75
BDNF-219ENST00000584049 USP54Q70EL1 1684 aa10.39□□□□□ -0.75
BDNF-219ENST00000584049 ADGRL3Q9HAR2 1447 aa10.39□□□□□ -0.75
BDNF-219ENST00000584049 TAF7Q15545 349 aaPredicted RBP10.39□□□□□ -0.75
BDNF-219ENST00000584049 ZSWIM6Q9HCJ5 1215 aa10.39□□□□□ -0.75
BDNF-219ENST00000584049 TMEM2Q9UHN6 1383 aa10.39□□□□□ -0.75
BDNF-219ENST00000584049 HOXB7P09629 217 aa10.38□□□□□ -0.75
BDNF-219ENST00000584049 GJB2P29033 226 aa10.38□□□□□ -0.75
BDNF-219ENST00000584049 FAM200AQ8TCP9 573 aa10.38□□□□□ -0.75
BDNF-219ENST00000584049 GTPBP4Q9BZE4 634 aaKnown RBP10.38□□□□□ -0.75
BDNF-219ENST00000584049 NWD1Q149M9 1564 aa10.38□□□□□ -0.75
BDNF-219ENST00000584049 UBR1Q8IWV7 1749 aa10.38□□□□□ -0.75
BDNF-219ENST00000584049 GIMAP6Q6P9H5 292 aa10.38□□□□□ -0.75
BDNF-219ENST00000584049 DIP2AQ14689 1571 aa10.38□□□□□ -0.75
BDNF-219ENST00000584049 CASTP20810 708 aaKnown RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms