RNA–Protein interactions for RNA: ENST00000583992.1

SNRPCP4-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 4, humanhuman

BASIC

Gene SNRPCP4, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP4-201ENST00000583992 IGHDP01880 384 aa13.76□□□□□ -0.21
SNRPCP4-201ENST00000583992 HDAC1Q13547 482 aaPredicted RBP13.76□□□□□ -0.21
SNRPCP4-201ENST00000583992 DDX21Q9NR30 783 aaKnown RBP eCLIP13.76□□□□□ -0.21
SNRPCP4-201ENST00000583992 ERBB4Q15303 1308 aa13.75□□□□□ -0.21
SNRPCP4-201ENST00000583992 PRAMEF22A3QJZ6 481 aa13.75□□□□□ -0.21
SNRPCP4-201ENST00000583992 DDX58O95786 925 aaKnown RBP13.75□□□□□ -0.21
SNRPCP4-201ENST00000583992 PHAXQ9H814 394 aaKnown RBP13.75□□□□□ -0.21
SNRPCP4-201ENST00000583992 USP21Q9UK80 565 aa13.75□□□□□ -0.21
SNRPCP4-201ENST00000583992 DOT1LQ8TEK3 1739 aa13.73□□□□□ -0.21
SNRPCP4-201ENST00000583992 ANXA1P04083 346 aa13.73□□□□□ -0.21
SNRPCP4-201ENST00000583992 BCL9O00512 1426 aa13.73□□□□□ -0.21
SNRPCP4-201ENST00000583992 ATP10DQ9P241 1426 aa13.73□□□□□ -0.21
SNRPCP4-201ENST00000583992 ITGB4P16144 1822 aa13.72□□□□□ -0.21
SNRPCP4-201ENST00000583992 GNAI3P08754 354 aa13.72□□□□□ -0.21
SNRPCP4-201ENST00000583992 PROSER3Q2NL68 480 aa13.72□□□□□ -0.21
SNRPCP4-201ENST00000583992 DNAAF4Q8WXU2 420 aa13.72□□□□□ -0.21
SNRPCP4-201ENST00000583992 C1orf115Q9H7X2 142 aa13.72□□□□□ -0.21
SNRPCP4-201ENST00000583992 FAM98CQ17RN3 349 aaKnown RBP13.71□□□□□ -0.21
SNRPCP4-201ENST00000583992 PIGBQ92521 554 aa13.71□□□□□ -0.21
SNRPCP4-201ENST00000583992 MEIS3Q99687 375 aa13.71□□□□□ -0.21
SNRPCP4-201ENST00000583992 SRCIN1Q9C0H9 1055 aa13.71□□□□□ -0.21
SNRPCP4-201ENST00000583992 ADCY9O60503 1353 aa13.71□□□□□ -0.22
SNRPCP4-201ENST00000583992 PI4KAP2A4QPH2 592 aa13.7□□□□□ -0.22
SNRPCP4-201ENST00000583992 PTCD1O75127 700 aaKnown RBP13.7□□□□□ -0.22
SNRPCP4-201ENST00000583992 PDIA6Q15084 440 aa13.7□□□□□ -0.22
SNRPCP4-201ENST00000583992 KSR2Q6VAB6 950 aa13.7□□□□□ -0.22
SNRPCP4-201ENST00000583992 VSIG10Q8N0Z9 540 aa13.7□□□□□ -0.22
SNRPCP4-201ENST00000583992 PI4KAP1Q8N8J0 262 aa13.7□□□□□ -0.22
SNRPCP4-201ENST00000583992 SYTL4Q96C24 671 aaPredicted RBP13.7□□□□□ -0.22
SNRPCP4-201ENST00000583992 TEX13AQ9BXU3 409 aaPredicted RBP13.7□□□□□ -0.22
SNRPCP4-201ENST00000583992 USP16Q9Y5T5 823 aa13.7□□□□□ -0.22
SNRPCP4-201ENST00000583992 THSD7AQ9UPZ6 1657 aa13.69□□□□□ -0.22
SNRPCP4-201ENST00000583992 AFF2P51816 1311 aa13.69□□□□□ -0.22
SNRPCP4-201ENST00000583992 A0A0G2JS52 829 aa13.69□□□□□ -0.22
SNRPCP4-201ENST00000583992 GNAI2P04899 355 aa13.69□□□□□ -0.22
SNRPCP4-201ENST00000583992 MYL6BP14649 208 aa13.69□□□□□ -0.22
SNRPCP4-201ENST00000583992 MYT1Q01538 1121 aa13.69□□□□□ -0.22
SNRPCP4-201ENST00000583992 RPAP2Q8IXW5 612 aaPredicted RBP13.69□□□□□ -0.22
SNRPCP4-201ENST00000583992 SMC5Q8IY18 1101 aa13.69□□□□□ -0.22
SNRPCP4-201ENST00000583992 MARCH10Q8NA82 808 aaPredicted RBP13.69□□□□□ -0.22
SNRPCP4-201ENST00000583992 TSHZ2Q9NRE2 1034 aa13.69□□□□□ -0.22
SNRPCP4-201ENST00000583992 ATG3Q9NT62 314 aa13.69□□□□□ -0.22
SNRPCP4-201ENST00000583992 MAP3K2Q9Y2U5 619 aa13.69□□□□□ -0.22
SNRPCP4-201ENST00000583992 HMMRO75330 724 aa13.68□□□□□ -0.22
SNRPCP4-201ENST00000583992 ALDH1L1O75891 902 aa13.68□□□□□ -0.22
SNRPCP4-201ENST00000583992 ANKRD44Q8N8A2 993 aa13.68□□□□□ -0.22
SNRPCP4-201ENST00000583992 XAGE3Q8WTP9 111 aa13.68□□□□□ -0.22
SNRPCP4-201ENST00000583992 GCC1Q96CN9 775 aa13.68□□□□□ -0.22
SNRPCP4-201ENST00000583992 ASAP1Q9ULH1 1129 aa13.68□□□□□ -0.22
SNRPCP4-201ENST00000583992 ATRNO75882 1429 aa13.67□□□□□ -0.22
SNRPCP4-201ENST00000583992 UBTFL1P0CB47 393 aaPredicted RBP13.67□□□□□ -0.22
SNRPCP4-201ENST00000583992 PRIM1P49642 420 aaKnown RBP13.67□□□□□ -0.22
SNRPCP4-201ENST00000583992 RGS3P49796 1198 aa13.67□□□□□ -0.22
SNRPCP4-201ENST00000583992 AIMP1Q12904 312 aaKnown RBP13.67□□□□□ -0.22
SNRPCP4-201ENST00000583992 BEND3Q5T5X7 828 aa13.67□□□□□ -0.22
SNRPCP4-201ENST00000583992 CEP85Q6P2H3 762 aa13.67□□□□□ -0.22
SNRPCP4-201ENST00000583992 RIC3Q7Z5B4 369 aa13.67□□□□□ -0.22
SNRPCP4-201ENST00000583992 RBM42Q9BTD8 480 aaKnown RBP13.67□□□□□ -0.22
SNRPCP4-201ENST00000583992 TRPC5Q9UL62 973 aaPredicted RBP13.67□□□□□ -0.22
SNRPCP4-201ENST00000583992 PDZRN3Q9UPQ7 1066 aa13.67□□□□□ -0.22
SNRPCP4-201ENST00000583992 STARD3NLO95772 234 aa13.66□□□□□ -0.22
SNRPCP4-201ENST00000583992 NEXNQ0ZGT2 675 aa13.66□□□□□ -0.22
SNRPCP4-201ENST00000583992 COPS6Q7L5N1 327 aa13.66□□□□□ -0.22
SNRPCP4-201ENST00000583992 LINS1Q8NG48 757 aa13.66□□□□□ -0.22
SNRPCP4-201ENST00000583992 HDAC5Q9UQL6 1122 aa13.66□□□□□ -0.22
SNRPCP4-201ENST00000583992 IBTKQ9P2D0 1353 aaPredicted RBP13.66□□□□□ -0.22
SNRPCP4-201ENST00000583992 LRP10Q7Z4F1 713 aa13.65□□□□□ -0.22
SNRPCP4-201ENST00000583992 SKAP1Q86WV1 359 aa13.65□□□□□ -0.22
SNRPCP4-201ENST00000583992 PIAS4Q8N2W9 510 aaPredicted RBP13.65□□□□□ -0.22
SNRPCP4-201ENST00000583992 ACSBG1Q96GR2 724 aa13.65□□□□□ -0.22
SNRPCP4-201ENST00000583992 GJD4Q96KN9 370 aaPredicted RBP13.65□□□□□ -0.22
SNRPCP4-201ENST00000583992 ANKRD13DQ6ZTN6 518 aa13.64□□□□□ -0.23
SNRPCP4-201ENST00000583992 DNAJC10Q8IXB1 793 aa13.64□□□□□ -0.23
SNRPCP4-201ENST00000583992 SIRT2Q8IXJ6 389 aa13.64□□□□□ -0.23
SNRPCP4-201ENST00000583992 SMARCC1Q92922 1105 aaPredicted RBP13.64□□□□□ -0.23
SNRPCP4-201ENST00000583992 USP44Q9H0E7 712 aa13.64□□□□□ -0.23
SNRPCP4-201ENST00000583992 NBPF26B4DH59 902 aa13.63□□□□□ -0.23
SNRPCP4-201ENST00000583992 A1BGP04217 495 aa13.63□□□□□ -0.23
SNRPCP4-201ENST00000583992 PIP4K2AP48426 406 aaPredicted RBP13.63□□□□□ -0.23
SNRPCP4-201ENST00000583992 NUCB1Q02818 461 aa13.63□□□□□ -0.23
SNRPCP4-201ENST00000583992 NBPF14Q5TI25 921 aa13.63□□□□□ -0.23
SNRPCP4-201ENST00000583992 NBPF10Q6P3W6 841 aaKnown RBP13.63□□□□□ -0.23
SNRPCP4-201ENST00000583992 NBPF15Q8N660 670 aa13.63□□□□□ -0.23
SNRPCP4-201ENST00000583992 PLBD2Q8NHP8 589 aa13.63□□□□□ -0.23
SNRPCP4-201ENST00000583992 METTL22Q9BUU2 404 aaPredicted RBP13.63□□□□□ -0.23
SNRPCP4-201ENST00000583992 C9orf78Q9NZ63 289 aaPredicted RBP13.63□□□□□ -0.23
SNRPCP4-201ENST00000583992 ZBTB47Q9UFB7 747 aaPredicted RBP13.63□□□□□ -0.23
SNRPCP4-201ENST00000583992 LRRFIP2Q9Y608 721 aaKnown RBP13.63□□□□□ -0.23
SNRPCP4-201ENST00000583992 ARFGEF2Q9Y6D5 1785 aa13.63□□□□□ -0.23
SNRPCP4-201ENST00000583992 TJP1Q07157 1748 aa13.62□□□□□ -0.23
SNRPCP4-201ENST00000583992 CICQ96RK0 1608 aaPredicted RBP13.62□□□□□ -0.23
SNRPCP4-201ENST00000583992 CHD1LQ86WJ1 897 aa13.62□□□□□ -0.23
SNRPCP4-201ENST00000583992 MYD88Q99836 296 aa13.62□□□□□ -0.23
SNRPCP4-201ENST00000583992 PALLDQ8WX93 1383 aa13.61□□□□□ -0.23
SNRPCP4-201ENST00000583992 GRM8O00222 908 aa13.61□□□□□ -0.23
SNRPCP4-201ENST00000583992 CWF19L2Q2TBE0 894 aaKnown RBP13.61□□□□□ -0.23
SNRPCP4-201ENST00000583992 DCTPP1Q9H773 170 aa13.61□□□□□ -0.23
SNRPCP4-201ENST00000583992 NHSQ6T4R5 1651 aa13.6□□□□□ -0.23
SNRPCP4-201ENST00000583992 ATP8B2P98198 1209 aa13.6□□□□□ -0.23
SNRPCP4-201ENST00000583992 NUP188Q5SRE5 1749 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms