RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 HMOX1P09601 288 aa27.76■■■□□ 2.04
SRSF1-206ENST00000583741 CYP19A1P11511 503 aaPredicted RBP27.76■■■□□ 2.04
SRSF1-206ENST00000583741 DNAJC5GQ8N7S2 189 aa27.76■■■□□ 2.04
SRSF1-206ENST00000583741 RNMTO43148 476 aaKnown RBP27.76■■■□□ 2.03
SRSF1-206ENST00000583741 ZPR1O75312 459 aa27.76■■■□□ 2.03
SRSF1-206ENST00000583741 UBR2Q8IWV8 1755 aa27.75■■■□□ 2.03
SRSF1-206ENST00000583741 DLEC1Q9Y238 1755 aa27.75■■■□□ 2.03
SRSF1-206ENST00000583741 RNF181Q9P0P0 153 aa27.75■■■□□ 2.03
SRSF1-206ENST00000583741 COL15A1P39059 1388 aa27.74■■■□□ 2.03
SRSF1-206ENST00000583741 ZBTB1Q9Y2K1 713 aa27.74■■■□□ 2.03
SRSF1-206ENST00000583741 TNRC6CQ9HCJ0 1690 aaKnown RBP27.73■■■□□ 2.03
SRSF1-206ENST00000583741 RBM46Q8TBY0 533 aaKnown RBP27.73■■■□□ 2.03
SRSF1-206ENST00000583741 PCNTO95613 3336 aa27.73■■■□□ 2.03
SRSF1-206ENST00000583741 NFIXQ14938 502 aa27.72■■■□□ 2.03
SRSF1-206ENST00000583741 MTHFSDQ2M296 383 aaKnown RBP27.72■■■□□ 2.03
SRSF1-206ENST00000583741 KIF7Q2M1P5 1343 aa27.72■■■□□ 2.03
SRSF1-206ENST00000583741 NARFQ9UHQ1 456 aa27.71■■■□□ 2.03
SRSF1-206ENST00000583741 BCL2L12Q9HB09 334 aa27.7■■■□□ 2.03
SRSF1-206ENST00000583741 KDM2BQ8NHM5 1336 aa27.7■■■□□ 2.02
SRSF1-206ENST00000583741 C16orf71Q8IYS4 520 aaPredicted RBP27.69■■■□□ 2.02
SRSF1-206ENST00000583741 HTRA3P83110 453 aa27.67■■■□□ 2.02
SRSF1-206ENST00000583741 RASSF7Q02833 373 aa27.67■■■□□ 2.02
SRSF1-206ENST00000583741 CARMIL3Q8ND23 1372 aa27.66■■■□□ 2.02
SRSF1-206ENST00000583741 VSIG10Q8N0Z9 540 aa27.66■■■□□ 2.02
SRSF1-206ENST00000583741 RRAGCQ9HB90 399 aa27.66■■■□□ 2.02
SRSF1-206ENST00000583741 PER1O15534 1290 aaPredicted RBP27.65■■■□□ 2.02
SRSF1-206ENST00000583741 DIAPH1O60610 1272 aaKnown RBP27.65■■■□□ 2.02
SRSF1-206ENST00000583741 CCDC88AQ3V6T2 1871 aa27.64■■■□□ 2.02
SRSF1-206ENST00000583741 SERPINB2P05120 415 aa27.64■■■□□ 2.02
SRSF1-206ENST00000583741 TIAM2Q8IVF5 1701 aa27.64■■■□□ 2.02
SRSF1-206ENST00000583741 COL3A1P02461 1466 aaPredicted RBP27.64■■■□□ 2.02
SRSF1-206ENST00000583741 SIPA1L3O60292 1781 aaPredicted RBP27.64■■■□□ 2.01
SRSF1-206ENST00000583741 CANXP27824 592 aaKnown RBP27.64■■■□□ 2.01
SRSF1-206ENST00000583741 PRELPP51888 382 aa27.64■■■□□ 2.01
SRSF1-206ENST00000583741 FSTL1Q12841 308 aa27.64■■■□□ 2.01
SRSF1-206ENST00000583741 CC2D1BQ5T0F9 858 aaKnown RBP27.64■■■□□ 2.01
SRSF1-206ENST00000583741 ANKRD31Q8N7Z5 1873 aa27.63■■■□□ 2.01
SRSF1-206ENST00000583741 SCN7AQ01118 1682 aa27.62■■■□□ 2.01
SRSF1-206ENST00000583741 EIF5P55010 431 aaKnown RBP27.6■■■□□ 2.01
SRSF1-206ENST00000583741 ZC3H4Q9UPT8 1303 aaKnown RBP27.6■■■□□ 2.01
SRSF1-206ENST00000583741 C2CD5Q86YS7 1000 aa27.59■■■□□ 2.01
SRSF1-206ENST00000583741 BICDL1Q6ZP65 573 aa27.58■■■□□ 2.01
SRSF1-206ENST00000583741 TTC5Q8N0Z6 440 aa27.58■■■□□ 2.01
SRSF1-206ENST00000583741 TTLL6Q8N841 843 aa27.58■■■□□ 2.01
SRSF1-206ENST00000583741 KLRG1Q96E93 195 aa27.58■■■□□ 2.01
SRSF1-206ENST00000583741 COL11A2P13942 1736 aaPredicted RBP27.58■■■□□ 2.01
SRSF1-206ENST00000583741 LMNB1P20700 586 aa27.57■■■□□ 2
SRSF1-206ENST00000583741 ZNF496Q96IT1 587 aaPredicted RBP27.57■■■□□ 2
SRSF1-206ENST00000583741 STARD3NLO95772 234 aa27.57■■■□□ 2
SRSF1-206ENST00000583741 IL17REQ8NFR9 667 aa27.56■■■□□ 2
SRSF1-206ENST00000583741 HEG1Q9ULI3 1381 aa27.55■■■□□ 2
SRSF1-206ENST00000583741 NFKBIEO00221 500 aa27.55■■■□□ 2
SRSF1-206ENST00000583741 TBC1D9BQ66K14 1250 aa27.55■■■□□ 2
SRSF1-206ENST00000583741 H0YIN7 160 aa27.54■■■□□ 2
SRSF1-206ENST00000583741 ZNF790Q6PG37 636 aa27.54■■■□□ 2
SRSF1-206ENST00000583741 JMYQ8N9B5 988 aa27.54■■■□□ 2
SRSF1-206ENST00000583741 SMC1BQ8NDV3 1235 aa27.54■■■□□ 2
SRSF1-206ENST00000583741 GLTPD2A6NH11 291 aa27.53■■■□□ 2
SRSF1-206ENST00000583741 U2SURPO15042 1029 aaKnown RBP27.53■■■□□ 2
SRSF1-206ENST00000583741 A0A087WZG4 1122 aa27.52■■■□□ 2
SRSF1-206ENST00000583741 TEFQ10587 303 aa27.52■■■□□ 2
SRSF1-206ENST00000583741 CNGB1Q14028 1251 aaPredicted RBP27.52■■■□□ 2
SRSF1-206ENST00000583741 FER1L6Q2WGJ9 1857 aa27.51■■■□□ 2
SRSF1-206ENST00000583741 GNAT3A8MTJ3 354 aa27.51■■■□□ 2
SRSF1-206ENST00000583741 ZNF330Q9Y3S2 320 aaPredicted RBP27.51■■■□□ 2
SRSF1-206ENST00000583741 CCDC24Q8N4L8 307 aa27.51■■□□□ 1.99
SRSF1-206ENST00000583741 TBC1D2BQ9UPU7 963 aa27.51■■□□□ 1.99
SRSF1-206ENST00000583741 DICER1Q9UPY3 1922 aaKnown RBP27.5■■□□□ 1.99
SRSF1-206ENST00000583741 NPC1L1Q9UHC9 1359 aa27.5■■□□□ 1.99
SRSF1-206ENST00000583741 VEGFAP15692 232 aaPredicted RBP27.5■■□□□ 1.99
SRSF1-206ENST00000583741 GAS2L2Q8NHY3 880 aa27.5■■□□□ 1.99
SRSF1-206ENST00000583741 BCORQ6W2J9 1755 aa27.49■■□□□ 1.99
SRSF1-206ENST00000583741 CACNA1SQ13698 1873 aa27.49■■□□□ 1.99
SRSF1-206ENST00000583741 PRR5LQ6MZQ0 368 aa27.49■■□□□ 1.99
SRSF1-206ENST00000583741 BRIP1Q9BX63 1249 aa27.48■■□□□ 1.99
SRSF1-206ENST00000583741 CEMIPQ8WUJ3 1361 aa27.48■■□□□ 1.99
SRSF1-206ENST00000583741 IL6STP40189 918 aaPredicted RBP27.47■■□□□ 1.99
SRSF1-206ENST00000583741 ZNF622Q969S3 477 aaKnown RBP eCLIP27.47■■□□□ 1.994e-15■■□□□ 12.1
SRSF1-206ENST00000583741 TEX13AQ9BXU3 409 aaPredicted RBP27.47■■□□□ 1.99
SRSF1-206ENST00000583741 A1BGP04217 495 aa27.46■■□□□ 1.99
SRSF1-206ENST00000583741 ZNF219Q9P2Y4 722 aaPredicted RBP27.46■■□□□ 1.99
SRSF1-206ENST00000583741 POTECB2RU33 542 aa27.45■■□□□ 1.99
SRSF1-206ENST00000583741 C21orf2O43822 256 aa27.45■■□□□ 1.99
SRSF1-206ENST00000583741 FMNL2Q96PY5 1086 aa27.45■■□□□ 1.99
SRSF1-206ENST00000583741 SLX4Q8IY92 1834 aa27.45■■□□□ 1.98
SRSF1-206ENST00000583741 KCNQ3O43525 872 aa27.44■■□□□ 1.98
SRSF1-206ENST00000583741 PDE6BP35913 854 aa27.44■■□□□ 1.98
SRSF1-206ENST00000583741 COL13A1Q5TAT6 717 aaPredicted RBP27.44■■□□□ 1.98
SRSF1-206ENST00000583741 PHACTR3Q96KR7 559 aa27.44■■□□□ 1.98
SRSF1-206ENST00000583741 ARFGEF2Q9Y6D5 1785 aa27.44■■□□□ 1.98
SRSF1-206ENST00000583741 CAMTA2O94983 1202 aa27.44■■□□□ 1.98
SRSF1-206ENST00000583741 PDZRN3Q9UPQ7 1066 aa27.43■■□□□ 1.98
SRSF1-206ENST00000583741 PRKAR2BP31323 418 aa27.41■■□□□ 1.98
SRSF1-206ENST00000583741 CNBD1Q8NA66 436 aa27.41■■□□□ 1.98
SRSF1-206ENST00000583741 BTBD11A6QL63 1104 aa27.4■■□□□ 1.98
SRSF1-206ENST00000583741 SETDB2Q96T68 719 aa27.4■■□□□ 1.98
SRSF1-206ENST00000583741 RSPH6AQ9H0K4 717 aa27.4■■□□□ 1.98
SRSF1-206ENST00000583741 PIP4K2AP48426 406 aaPredicted RBP27.39■■□□□ 1.98
SRSF1-206ENST00000583741 ERFEQ4G0M1 354 aa27.39■■□□□ 1.98
SRSF1-206ENST00000583741 DPY19L2Q6NUT2 758 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms