RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 DDR1Q08345 913 aa33.02■■■□□ 2.88
TSEN54-209ENST00000583454 PARP3Q9Y6F1 533 aa33.02■■■□□ 2.88
TSEN54-209ENST00000583454 SOS1Q07889 1333 aaPredicted RBP33.02■■■□□ 2.88
TSEN54-209ENST00000583454 SENP3-EIF4A1A0A087X0R7 540 aa33.01■■■□□ 2.87
TSEN54-209ENST00000583454 AFDNP55196 1824 aaKnown RBP33■■■□□ 2.87
TSEN54-209ENST00000583454 ANP32CO43423 234 aa32.99■■■□□ 2.87
TSEN54-209ENST00000583454 DPEP1P16444 411 aa32.99■■■□□ 2.87
TSEN54-209ENST00000583454 PLEKHF1Q96S99 279 aa32.99■■■□□ 2.87
TSEN54-209ENST00000583454 KCNA3P22001 575 aa32.98■■■□□ 2.87
TSEN54-209ENST00000583454 NRXN2Q9P2S2 1712 aa32.97■■■□□ 2.87
TSEN54-209ENST00000583454 GNAT3A8MTJ3 354 aa32.97■■■□□ 2.87
TSEN54-209ENST00000583454 PNNQ9H307 717 aaKnown RBP32.97■■■□□ 2.87
TSEN54-209ENST00000583454 TM4SF1P30408 202 aa32.95■■■□□ 2.87
TSEN54-209ENST00000583454 VSIG10Q8N0Z9 540 aa32.95■■■□□ 2.87
TSEN54-209ENST00000583454 BCS1LQ9Y276 419 aa32.95■■■□□ 2.87
TSEN54-209ENST00000583454 ZBTB1Q9Y2K1 713 aa32.95■■■□□ 2.87
TSEN54-209ENST00000583454 IL17REQ8NFR9 667 aa32.94■■■□□ 2.86
TSEN54-209ENST00000583454 GPBP1L1Q9HC44 474 aaPredicted RBP32.94■■■□□ 2.86
TSEN54-209ENST00000583454 COL15A1P39059 1388 aa32.94■■■□□ 2.86
TSEN54-209ENST00000583454 POLRMTO00411 1230 aaKnown RBP32.93■■■□□ 2.86
TSEN54-209ENST00000583454 USPL1Q5W0Q7 1092 aa32.93■■■□□ 2.86
TSEN54-209ENST00000583454 NEFMP07197 916 aa32.91■■■□□ 2.86
TSEN54-209ENST00000583454 ZNF526Q8TF50 670 aaPredicted RBP32.91■■■□□ 2.86
TSEN54-209ENST00000583454 WDR43Q15061 677 aaKnown RBP eCLIP32.9■■■□□ 2.86
TSEN54-209ENST00000583454 NARFQ9UHQ1 456 aa32.9■■■□□ 2.86
TSEN54-209ENST00000583454 CEMIPQ8WUJ3 1361 aa32.89■■■□□ 2.86
TSEN54-209ENST00000583454 BCL2L12Q9HB09 334 aa32.89■■■□□ 2.86
TSEN54-209ENST00000583454 DLEC1Q9Y238 1755 aa32.88■■■□□ 2.85
TSEN54-209ENST00000583454 ZPR1O75312 459 aa32.88■■■□□ 2.85
TSEN54-209ENST00000583454 CCDC184Q52MB2 194 aa32.88■■■□□ 2.85
TSEN54-209ENST00000583454 HTATSF1O43719 755 aaKnown RBP32.87■■■□□ 2.85
TSEN54-209ENST00000583454 ADAMTS8Q9UP79 889 aa32.87■■■□□ 2.85
TSEN54-209ENST00000583454 SCN7AQ01118 1682 aa32.87■■■□□ 2.85
TSEN54-209ENST00000583454 ZNF496Q96IT1 587 aaPredicted RBP32.86■■■□□ 2.85
TSEN54-209ENST00000583454 HEG1Q9ULI3 1381 aa32.85■■■□□ 2.85
TSEN54-209ENST00000583454 MAPK8IP3Q9UPT6 1336 aa32.85■■■□□ 2.85
TSEN54-209ENST00000583454 NFIXQ14938 502 aa32.85■■■□□ 2.85
TSEN54-209ENST00000583454 NFE2L2Q16236 605 aa32.85■■■□□ 2.85
TSEN54-209ENST00000583454 ZNF790Q6PG37 636 aa32.85■■■□□ 2.85
TSEN54-209ENST00000583454 TEFQ10587 303 aa32.84■■■□□ 2.85
TSEN54-209ENST00000583454 TTC5Q8N0Z6 440 aa32.84■■■□□ 2.85
TSEN54-209ENST00000583454 DLG5Q8TDM6 1919 aa32.84■■■□□ 2.85
TSEN54-209ENST00000583454 SBF1O95248 1867 aa32.84■■■□□ 2.85
TSEN54-209ENST00000583454 CHRNA5P30532 468 aa32.83■■■□□ 2.85
TSEN54-209ENST00000583454 ARHGAP27Q6ZUM4 889 aa32.83■■■□□ 2.85
TSEN54-209ENST00000583454 PIM2Q9P1W9 311 aa32.83■■■□□ 2.85
TSEN54-209ENST00000583454 EIF5P55010 431 aaKnown RBP32.82■■■□□ 2.84
TSEN54-209ENST00000583454 RTF1Q92541 710 aaKnown RBP32.82■■■□□ 2.84
TSEN54-209ENST00000583454 KIF3CO14782 793 aa32.81■■■□□ 2.84
TSEN54-209ENST00000583454 CANXP27824 592 aaKnown RBP32.81■■■□□ 2.84
TSEN54-209ENST00000583454 ANKRD31Q8N7Z5 1873 aa32.8■■■□□ 2.84
TSEN54-209ENST00000583454 STARD3NLO95772 234 aa32.79■■■□□ 2.84
TSEN54-209ENST00000583454 RUNDC1Q96C34 613 aa32.79■■■□□ 2.84
TSEN54-209ENST00000583454 DALRD3Q5D0E6 543 aaKnown RBP32.78■■■□□ 2.84
TSEN54-209ENST00000583454 MCM10Q7L590 875 aa32.78■■■□□ 2.84
TSEN54-209ENST00000583454 CCDC146Q8IYE0 955 aa32.78■■■□□ 2.84
TSEN54-209ENST00000583454 BCORQ6W2J9 1755 aa32.77■■■□□ 2.84
TSEN54-209ENST00000583454 CARMIL3Q8ND23 1372 aa32.76■■■□□ 2.83
TSEN54-209ENST00000583454 KCNQ3O43525 872 aa32.76■■■□□ 2.83
TSEN54-209ENST00000583454 DCTN1Q14203 1278 aa32.76■■■□□ 2.83
TSEN54-209ENST00000583454 PNISRQ8TF01 805 aaKnown RBP32.76■■■□□ 2.83
TSEN54-209ENST00000583454 MRS2Q9HD23 443 aa32.76■■■□□ 2.83
TSEN54-209ENST00000583454 TMPOP42166 694 aaKnown RBP32.75■■■□□ 2.83
TSEN54-209ENST00000583454 SERPINB2P05120 415 aa32.74■■■□□ 2.83
TSEN54-209ENST00000583454 TEX13AQ9BXU3 409 aaPredicted RBP32.74■■■□□ 2.83
TSEN54-209ENST00000583454 FMNL2Q96PY5 1086 aa32.73■■■□□ 2.83
TSEN54-209ENST00000583454 RIPK4P57078 832 aa32.72■■■□□ 2.83
TSEN54-209ENST00000583454 C9orf131Q5VYM1 1079 aa32.72■■■□□ 2.83
TSEN54-209ENST00000583454 COL11A2P13942 1736 aaPredicted RBP32.71■■■□□ 2.83
TSEN54-209ENST00000583454 A0A087WZG4 1122 aa32.7■■■□□ 2.83
TSEN54-209ENST00000583454 BTBD11A6QL63 1104 aa32.7■■■□□ 2.83
TSEN54-209ENST00000583454 IL6STP40189 918 aaPredicted RBP32.7■■■□□ 2.83
TSEN54-209ENST00000583454 A1BGP04217 495 aa32.69■■■□□ 2.82
TSEN54-209ENST00000583454 HSPA6P17066 643 aa32.68■■■□□ 2.82
TSEN54-209ENST00000583454 TBC1D9BQ66K14 1250 aa32.68■■■□□ 2.82
TSEN54-209ENST00000583454 TAF7Q15545 349 aaPredicted RBP32.67■■■□□ 2.82
TSEN54-209ENST00000583454 TBC1D2BQ9UPU7 963 aa32.67■■■□□ 2.82
TSEN54-209ENST00000583454 CCDC88AQ3V6T2 1871 aa32.67■■■□□ 2.82
TSEN54-209ENST00000583454 BICDL1Q6ZP65 573 aa32.66■■■□□ 2.82
TSEN54-209ENST00000583454 NMRK2Q9NPI5 230 aa32.66■■■□□ 2.82
TSEN54-209ENST00000583454 RRP7AQ9Y3A4 280 aaKnown RBP32.66■■■□□ 2.82
TSEN54-209ENST00000583454 LMOD3Q0VAK6 560 aa32.65■■■□□ 2.82
TSEN54-209ENST00000583454 PRAMEF22A3QJZ6 481 aa32.64■■■□□ 2.82
TSEN54-209ENST00000583454 THUMPD2Q9BTF0 503 aaKnown RBP32.64■■■□□ 2.82
TSEN54-209ENST00000583454 USP16Q9Y5T5 823 aa32.64■■■□□ 2.82
TSEN54-209ENST00000583454 CAMTA2O94983 1202 aa32.63■■■□□ 2.81
TSEN54-209ENST00000583454 ZNF330Q9Y3S2 320 aaPredicted RBP32.63■■■□□ 2.81
TSEN54-209ENST00000583454 NEUROD2Q15784 382 aa32.62■■■□□ 2.81
TSEN54-209ENST00000583454 C2CD5Q86YS7 1000 aa32.62■■■□□ 2.81
TSEN54-209ENST00000583454 RNF181Q9P0P0 153 aa32.62■■■□□ 2.81
TSEN54-209ENST00000583454 TRIM35Q9UPQ4 493 aa32.62■■■□□ 2.81
TSEN54-209ENST00000583454 LAMB4A4D0S4 1761 aa32.62■■■□□ 2.81
TSEN54-209ENST00000583454 KDM3BQ7LBC6 1761 aa32.62■■■□□ 2.81
TSEN54-209ENST00000583454 TNRC6CQ9HCJ0 1690 aaKnown RBP32.62■■■□□ 2.81
TSEN54-209ENST00000583454 APAF1O14727 1248 aa32.61■■■□□ 2.81
TSEN54-209ENST00000583454 PRELPP51888 382 aa32.61■■■□□ 2.81
TSEN54-209ENST00000583454 TIAM2Q8IVF5 1701 aa32.6■■■□□ 2.81
TSEN54-209ENST00000583454 RASSF7Q02833 373 aa32.6■■■□□ 2.81
TSEN54-209ENST00000583454 PRR5LQ6MZQ0 368 aa32.6■■■□□ 2.81
TSEN54-209ENST00000583454 PIP4K2AP48426 406 aaPredicted RBP32.59■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms