RNA–Protein interactions for RNA: ENST00000583182.5

CDK5RAP3-226, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 709 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-226ENST00000583182 SLC39A6Q13433 755 aa20.16■□□□□ 0.82
CDK5RAP3-226ENST00000583182 NRXN2Q9P2S2 1712 aa20.16■□□□□ 0.82
CDK5RAP3-226ENST00000583182 RNMTO43148 476 aaKnown RBP20.15■□□□□ 0.82
CDK5RAP3-226ENST00000583182 C16orf71Q8IYS4 520 aaPredicted RBP20.15■□□□□ 0.82
CDK5RAP3-226ENST00000583182 KDM2BQ8NHM5 1336 aa20.15■□□□□ 0.82
CDK5RAP3-226ENST00000583182 TNRC6CQ9HCJ0 1690 aaKnown RBP20.15■□□□□ 0.82
CDK5RAP3-226ENST00000583182 NFIXQ14938 502 aa20.14■□□□□ 0.81
CDK5RAP3-226ENST00000583182 AMER1Q5JTC6 1135 aaPredicted RBP20.14■□□□□ 0.81
CDK5RAP3-226ENST00000583182 RRAGCQ9HB90 399 aa20.14■□□□□ 0.81
CDK5RAP3-226ENST00000583182 DLEC1Q9Y238 1755 aa20.13■□□□□ 0.81
CDK5RAP3-226ENST00000583182 COL15A1P39059 1388 aa20.13■□□□□ 0.81
CDK5RAP3-226ENST00000583182 HMOX1P09601 288 aa20.13■□□□□ 0.81
CDK5RAP3-226ENST00000583182 FSTL1Q12841 308 aa20.13■□□□□ 0.81
CDK5RAP3-226ENST00000583182 NARFQ9UHQ1 456 aa20.13■□□□□ 0.81
CDK5RAP3-226ENST00000583182 ZBTB1Q9Y2K1 713 aa20.13■□□□□ 0.81
CDK5RAP3-226ENST00000583182 RASSF7Q02833 373 aa20.12■□□□□ 0.81
CDK5RAP3-226ENST00000583182 BCL2L12Q9HB09 334 aa20.12■□□□□ 0.81
CDK5RAP3-226ENST00000583182 UBR2Q8IWV8 1755 aa20.11■□□□□ 0.81
CDK5RAP3-226ENST00000583182 MTHFSDQ2M296 383 aaKnown RBP20.11■□□□□ 0.81
CDK5RAP3-226ENST00000583182 PRELPP51888 382 aa20.1■□□□□ 0.81
CDK5RAP3-226ENST00000583182 KLRG1Q96E93 195 aa20.1■□□□□ 0.81
CDK5RAP3-226ENST00000583182 CCDC88AQ3V6T2 1871 aa20.09■□□□□ 0.81
CDK5RAP3-226ENST00000583182 SERPINB2P05120 415 aa20.09■□□□□ 0.81
CDK5RAP3-226ENST00000583182 CARMIL3Q8ND23 1372 aa20.08■□□□□ 0.8
CDK5RAP3-226ENST00000583182 VSIG10Q8N0Z9 540 aa20.07■□□□□ 0.8
CDK5RAP3-226ENST00000583182 JMYQ8N9B5 988 aa20.07■□□□□ 0.8
CDK5RAP3-226ENST00000583182 ZC3H4Q9UPT8 1303 aaKnown RBP20.06■□□□□ 0.8
CDK5RAP3-226ENST00000583182 LMNB1P20700 586 aa20.06■□□□□ 0.8
CDK5RAP3-226ENST00000583182 CANXP27824 592 aaKnown RBP20.06■□□□□ 0.8
CDK5RAP3-226ENST00000583182 TIAM2Q8IVF5 1701 aa20.06■□□□□ 0.8
CDK5RAP3-226ENST00000583182 KIF7Q2M1P5 1343 aa20.05■□□□□ 0.8
CDK5RAP3-226ENST00000583182 ANKRD31Q8N7Z5 1873 aa20.05■□□□□ 0.8
CDK5RAP3-226ENST00000583182 C2CD5Q86YS7 1000 aa20.05■□□□□ 0.8
CDK5RAP3-226ENST00000583182 TTLL6Q8N841 843 aa20.05■□□□□ 0.8
CDK5RAP3-226ENST00000583182 SMC1BQ8NDV3 1235 aa20.05■□□□□ 0.8
CDK5RAP3-226ENST00000583182 PCNTO95613 3336 aa20.04■□□□□ 0.8
CDK5RAP3-226ENST00000583182 DIAPH1O60610 1272 aaKnown RBP20.04■□□□□ 0.8
CDK5RAP3-226ENST00000583182 GLTPD2A6NH11 291 aa20.03■□□□□ 0.8
CDK5RAP3-226ENST00000583182 NFKBIEO00221 500 aa20.03■□□□□ 0.8
CDK5RAP3-226ENST00000583182 EIF5P55010 431 aaKnown RBP20.03■□□□□ 0.8
CDK5RAP3-226ENST00000583182 BICDL1Q6ZP65 573 aa20.03■□□□□ 0.8
CDK5RAP3-226ENST00000583182 H0YIN7 160 aa20.02■□□□□ 0.8
CDK5RAP3-226ENST00000583182 PER1O15534 1290 aaPredicted RBP20.02■□□□□ 0.8
CDK5RAP3-226ENST00000583182 SCN7AQ01118 1682 aa20.02■□□□□ 0.8
CDK5RAP3-226ENST00000583182 SIPA1L3O60292 1781 aaPredicted RBP20.02■□□□□ 0.8
CDK5RAP3-226ENST00000583182 COL3A1P02461 1466 aaPredicted RBP20.01■□□□□ 0.79
CDK5RAP3-226ENST00000583182 STARD3NLO95772 234 aa20.01■□□□□ 0.79
CDK5RAP3-226ENST00000583182 VEGFAP15692 232 aaPredicted RBP20.01■□□□□ 0.79
CDK5RAP3-226ENST00000583182 CC2D1BQ5T0F9 858 aaKnown RBP20.01■□□□□ 0.79
CDK5RAP3-226ENST00000583182 COL13A1Q5TAT6 717 aaPredicted RBP20.01■□□□□ 0.79
CDK5RAP3-226ENST00000583182 TBC1D9BQ66K14 1250 aa20.01■□□□□ 0.79
CDK5RAP3-226ENST00000583182 TTC5Q8N0Z6 440 aa20.01■□□□□ 0.79
CDK5RAP3-226ENST00000583182 ZNF496Q96IT1 587 aaPredicted RBP20.01■□□□□ 0.79
CDK5RAP3-226ENST00000583182 COL11A2P13942 1736 aaPredicted RBP20.01■□□□□ 0.79
CDK5RAP3-226ENST00000583182 HEG1Q9ULI3 1381 aa19.99■□□□□ 0.79
CDK5RAP3-226ENST00000583182 A0A087WZG4 1122 aa19.99■□□□□ 0.79
CDK5RAP3-226ENST00000583182 IL17REQ8NFR9 667 aa19.99■□□□□ 0.79
CDK5RAP3-226ENST00000583182 FER1L6Q2WGJ9 1857 aa19.99■□□□□ 0.79
CDK5RAP3-226ENST00000583182 DICER1Q9UPY3 1922 aaKnown RBP19.98■□□□□ 0.79
CDK5RAP3-226ENST00000583182 ZNF790Q6PG37 636 aa19.98■□□□□ 0.79
CDK5RAP3-226ENST00000583182 CCDC24Q8N4L8 307 aa19.98■□□□□ 0.79
CDK5RAP3-226ENST00000583182 CCER1Q8TC90 406 aaPredicted RBP19.98■□□□□ 0.79
CDK5RAP3-226ENST00000583182 TBC1D2BQ9UPU7 963 aa19.98■□□□□ 0.79
CDK5RAP3-226ENST00000583182 POTECB2RU33 542 aa19.97■□□□□ 0.79
CDK5RAP3-226ENST00000583182 PRR5LQ6MZQ0 368 aa19.97■□□□□ 0.79
CDK5RAP3-226ENST00000583182 ZNF622Q969S3 477 aaKnown RBP eCLIP19.97■□□□□ 0.798e-13■■□□□ 12.8
CDK5RAP3-226ENST00000583182 GNAT3A8MTJ3 354 aa19.96■□□□□ 0.79
CDK5RAP3-226ENST00000583182 TEFQ10587 303 aa19.96■□□□□ 0.79
CDK5RAP3-226ENST00000583182 BRIP1Q9BX63 1249 aa19.96■□□□□ 0.79
CDK5RAP3-226ENST00000583182 ZNF330Q9Y3S2 320 aaPredicted RBP19.96■□□□□ 0.79
CDK5RAP3-226ENST00000583182 CACNA1SQ13698 1873 aa19.95■□□□□ 0.78
CDK5RAP3-226ENST00000583182 U2SURPO15042 1029 aaKnown RBP19.95■□□□□ 0.78
CDK5RAP3-226ENST00000583182 C21orf2O43822 256 aa19.95■□□□□ 0.78
CDK5RAP3-226ENST00000583182 TEX13AQ9BXU3 409 aaPredicted RBP19.95■□□□□ 0.78
CDK5RAP3-226ENST00000583182 ZNF219Q9P2Y4 722 aaPredicted RBP19.95■□□□□ 0.78
CDK5RAP3-226ENST00000583182 A1BGP04217 495 aa19.94■□□□□ 0.78
CDK5RAP3-226ENST00000583182 PDE6BP35913 854 aa19.94■□□□□ 0.78
CDK5RAP3-226ENST00000583182 IL6STP40189 918 aaPredicted RBP19.94■□□□□ 0.78
CDK5RAP3-226ENST00000583182 GAS2L2Q8NHY3 880 aa19.94■□□□□ 0.78
CDK5RAP3-226ENST00000583182 PDZRN3Q9UPQ7 1066 aa19.94■□□□□ 0.78
CDK5RAP3-226ENST00000583182 BCORQ6W2J9 1755 aa19.93■□□□□ 0.78
CDK5RAP3-226ENST00000583182 SLX4Q8IY92 1834 aa19.93■□□□□ 0.78
CDK5RAP3-226ENST00000583182 KCNQ3O43525 872 aa19.92■□□□□ 0.78
CDK5RAP3-226ENST00000583182 CAMTA2O94983 1202 aa19.92■□□□□ 0.78
CDK5RAP3-226ENST00000583182 CNGB1Q14028 1251 aaPredicted RBP19.92■□□□□ 0.78
CDK5RAP3-226ENST00000583182 ERFEQ4G0M1 354 aa19.92■□□□□ 0.78
CDK5RAP3-226ENST00000583182 DPY19L2Q6NUT2 758 aa19.92■□□□□ 0.78
CDK5RAP3-226ENST00000583182 CEMIPQ8WUJ3 1361 aa19.92■□□□□ 0.78
CDK5RAP3-226ENST00000583182 FMNL2Q96PY5 1086 aa19.91■□□□□ 0.78
CDK5RAP3-226ENST00000583182 NPC1L1Q9UHC9 1359 aa19.91■□□□□ 0.78
CDK5RAP3-226ENST00000583182 ARFGEF2Q9Y6D5 1785 aa19.9■□□□□ 0.78
CDK5RAP3-226ENST00000583182 CNBD1Q8NA66 436 aa19.9■□□□□ 0.78
CDK5RAP3-226ENST00000583182 SETDB2Q96T68 719 aa19.9■□□□□ 0.78
CDK5RAP3-226ENST00000583182 HSPA1AP0DMV8 641 aaKnown RBP19.89■□□□□ 0.77
CDK5RAP3-226ENST00000583182 HSPA1BP0DMV9 641 aaKnown RBP19.89■□□□□ 0.77
CDK5RAP3-226ENST00000583182 TNS4Q8IZW8 715 aa19.89■□□□□ 0.77
CDK5RAP3-226ENST00000583182 PHACTR3Q96KR7 559 aa19.89■□□□□ 0.77
CDK5RAP3-226ENST00000583182 TAOK3Q9H2K8 898 aa19.89■□□□□ 0.77
CDK5RAP3-226ENST00000583182 LTBP3Q9NS15 1303 aa19.89■□□□□ 0.77
CDK5RAP3-226ENST00000583182 CAPN15O75808 1086 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms