RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 HTRA3P83110 453 aa22.03■■□□□ 1.12
SREBF1-221ENST00000583080 AMER1Q5JTC6 1135 aaPredicted RBP22.03■■□□□ 1.12
SREBF1-221ENST00000583080 TNRC6CQ9HCJ0 1690 aaKnown RBP22.03■■□□□ 1.12
SREBF1-221ENST00000583080 RNMTO43148 476 aaKnown RBP22.02■■□□□ 1.12
SREBF1-221ENST00000583080 ZPR1O75312 459 aa22.02■■□□□ 1.12
SREBF1-221ENST00000583080 HMOX1P09601 288 aa22.02■■□□□ 1.12
SREBF1-221ENST00000583080 CYP19A1P11511 503 aaPredicted RBP22.02■■□□□ 1.12
SREBF1-221ENST00000583080 ZBTB1Q9Y2K1 713 aa22.02■■□□□ 1.12
SREBF1-221ENST00000583080 DLEC1Q9Y238 1755 aa22.02■■□□□ 1.11
SREBF1-221ENST00000583080 RASSF7Q02833 373 aa22.01■■□□□ 1.11
SREBF1-221ENST00000583080 NFIXQ14938 502 aa22.01■■□□□ 1.11
SREBF1-221ENST00000583080 C16orf71Q8IYS4 520 aaPredicted RBP22.01■■□□□ 1.11
SREBF1-221ENST00000583080 UBR2Q8IWV8 1755 aa22■■□□□ 1.11
SREBF1-221ENST00000583080 BCL2L12Q9HB09 334 aa22■■□□□ 1.11
SREBF1-221ENST00000583080 KDM2BQ8NHM5 1336 aa22■■□□□ 1.11
SREBF1-221ENST00000583080 NARFQ9UHQ1 456 aa21.99■■□□□ 1.11
SREBF1-221ENST00000583080 CARMIL3Q8ND23 1372 aa21.99■■□□□ 1.11
SREBF1-221ENST00000583080 MTHFSDQ2M296 383 aaKnown RBP21.98■■□□□ 1.11
SREBF1-221ENST00000583080 RRAGCQ9HB90 399 aa21.98■■□□□ 1.11
SREBF1-221ENST00000583080 PRELPP51888 382 aa21.97■■□□□ 1.11
SREBF1-221ENST00000583080 FSTL1Q12841 308 aa21.97■■□□□ 1.11
SREBF1-221ENST00000583080 TIAM2Q8IVF5 1701 aa21.96■■□□□ 1.11
SREBF1-221ENST00000583080 KIF7Q2M1P5 1343 aa21.96■■□□□ 1.11
SREBF1-221ENST00000583080 KLRG1Q96E93 195 aa21.95■■□□□ 1.1
SREBF1-221ENST00000583080 SERPINB2P05120 415 aa21.94■■□□□ 1.1
SREBF1-221ENST00000583080 CANXP27824 592 aaKnown RBP21.93■■□□□ 1.1
SREBF1-221ENST00000583080 SCN7AQ01118 1682 aa21.93■■□□□ 1.1
SREBF1-221ENST00000583080 COL3A1P02461 1466 aaPredicted RBP21.92■■□□□ 1.1
SREBF1-221ENST00000583080 VSIG10Q8N0Z9 540 aa21.92■■□□□ 1.1
SREBF1-221ENST00000583080 ANKRD31Q8N7Z5 1873 aa21.92■■□□□ 1.1
SREBF1-221ENST00000583080 ZC3H4Q9UPT8 1303 aaKnown RBP21.91■■□□□ 1.1
SREBF1-221ENST00000583080 DIAPH1O60610 1272 aaKnown RBP21.91■■□□□ 1.1
SREBF1-221ENST00000583080 BICDL1Q6ZP65 573 aa21.91■■□□□ 1.1
SREBF1-221ENST00000583080 C2CD5Q86YS7 1000 aa21.91■■□□□ 1.1
SREBF1-221ENST00000583080 COL11A2P13942 1736 aaPredicted RBP21.91■■□□□ 1.1
SREBF1-221ENST00000583080 LMNB1P20700 586 aa21.9■■□□□ 1.1
SREBF1-221ENST00000583080 CC2D1BQ5T0F9 858 aaKnown RBP21.9■■□□□ 1.1
SREBF1-221ENST00000583080 TTLL6Q8N841 843 aa21.9■■□□□ 1.1
SREBF1-221ENST00000583080 JMYQ8N9B5 988 aa21.9■■□□□ 1.1
SREBF1-221ENST00000583080 SMC1BQ8NDV3 1235 aa21.9■■□□□ 1.1
SREBF1-221ENST00000583080 CCDC88AQ3V6T2 1871 aa21.9■■□□□ 1.1
SREBF1-221ENST00000583080 SIPA1L3O60292 1781 aaPredicted RBP21.89■■□□□ 1.1
SREBF1-221ENST00000583080 NFKBIEO00221 500 aa21.89■■□□□ 1.09
SREBF1-221ENST00000583080 EIF5P55010 431 aaKnown RBP21.89■■□□□ 1.09
SREBF1-221ENST00000583080 PER1O15534 1290 aaPredicted RBP21.88■■□□□ 1.09
SREBF1-221ENST00000583080 TTC5Q8N0Z6 440 aa21.88■■□□□ 1.09
SREBF1-221ENST00000583080 GLTPD2A6NH11 291 aa21.87■■□□□ 1.09
SREBF1-221ENST00000583080 TBC1D9BQ66K14 1250 aa21.87■■□□□ 1.09
SREBF1-221ENST00000583080 CCER1Q8TC90 406 aaPredicted RBP21.87■■□□□ 1.09
SREBF1-221ENST00000583080 ZNF496Q96IT1 587 aaPredicted RBP21.87■■□□□ 1.09
SREBF1-221ENST00000583080 HEG1Q9ULI3 1381 aa21.87■■□□□ 1.09
SREBF1-221ENST00000583080 H0YIN7 160 aa21.86■■□□□ 1.09
SREBF1-221ENST00000583080 STARD3NLO95772 234 aa21.85■■□□□ 1.09
SREBF1-221ENST00000583080 COL13A1Q5TAT6 717 aaPredicted RBP21.85■■□□□ 1.09
SREBF1-221ENST00000583080 CCDC24Q8N4L8 307 aa21.85■■□□□ 1.09
SREBF1-221ENST00000583080 IL17REQ8NFR9 667 aa21.84■■□□□ 1.09
SREBF1-221ENST00000583080 ZNF330Q9Y3S2 320 aaPredicted RBP21.84■■□□□ 1.09
SREBF1-221ENST00000583080 A0A087WZG4 1122 aa21.83■■□□□ 1.09
SREBF1-221ENST00000583080 VEGFAP15692 232 aaPredicted RBP21.83■■□□□ 1.09
SREBF1-221ENST00000583080 PRR5LQ6MZQ0 368 aa21.83■■□□□ 1.09
SREBF1-221ENST00000583080 ZNF790Q6PG37 636 aa21.83■■□□□ 1.09
SREBF1-221ENST00000583080 ZNF219Q9P2Y4 722 aaPredicted RBP21.83■■□□□ 1.09
SREBF1-221ENST00000583080 TBC1D2BQ9UPU7 963 aa21.83■■□□□ 1.09
SREBF1-221ENST00000583080 FER1L6Q2WGJ9 1857 aa21.82■■□□□ 1.08
SREBF1-221ENST00000583080 U2SURPO15042 1029 aaKnown RBP21.82■■□□□ 1.08
SREBF1-221ENST00000583080 TEFQ10587 303 aa21.82■■□□□ 1.08
SREBF1-221ENST00000583080 CNGB1Q14028 1251 aaPredicted RBP21.82■■□□□ 1.08
SREBF1-221ENST00000583080 BCORQ6W2J9 1755 aa21.82■■□□□ 1.08
SREBF1-221ENST00000583080 GNAT3A8MTJ3 354 aa21.81■■□□□ 1.08
SREBF1-221ENST00000583080 POTECB2RU33 542 aa21.81■■□□□ 1.08
SREBF1-221ENST00000583080 ZNF622Q969S3 477 aaKnown RBP eCLIP21.81■■□□□ 1.08
SREBF1-221ENST00000583080 C21orf2O43822 256 aa21.8■■□□□ 1.08
SREBF1-221ENST00000583080 GAS2L2Q8NHY3 880 aa21.8■■□□□ 1.08
SREBF1-221ENST00000583080 BRIP1Q9BX63 1249 aa21.8■■□□□ 1.08
SREBF1-221ENST00000583080 DICER1Q9UPY3 1922 aaKnown RBP21.8■■□□□ 1.08
SREBF1-221ENST00000583080 CACNA1SQ13698 1873 aa21.79■■□□□ 1.08
SREBF1-221ENST00000583080 IL6STP40189 918 aaPredicted RBP21.79■■□□□ 1.08
SREBF1-221ENST00000583080 PCNTO95613 3336 aa21.78■■□□□ 1.08
SREBF1-221ENST00000583080 CEMIPQ8WUJ3 1361 aa21.78■■□□□ 1.08
SREBF1-221ENST00000583080 KCNQ3O43525 872 aa21.78■■□□□ 1.08
SREBF1-221ENST00000583080 CAMTA2O94983 1202 aa21.78■■□□□ 1.08
SREBF1-221ENST00000583080 A1BGP04217 495 aa21.78■■□□□ 1.08
SREBF1-221ENST00000583080 PDE6BP35913 854 aa21.78■■□□□ 1.08
SREBF1-221ENST00000583080 NPC1L1Q9UHC9 1359 aa21.77■■□□□ 1.08
SREBF1-221ENST00000583080 FMNL2Q96PY5 1086 aa21.77■■□□□ 1.08
SREBF1-221ENST00000583080 TEX13AQ9BXU3 409 aaPredicted RBP21.77■■□□□ 1.08
SREBF1-221ENST00000583080 SLX4Q8IY92 1834 aa21.77■■□□□ 1.08
SREBF1-221ENST00000583080 ARFGEF2Q9Y6D5 1785 aa21.76■■□□□ 1.07
SREBF1-221ENST00000583080 ERFEQ4G0M1 354 aa21.76■■□□□ 1.07
SREBF1-221ENST00000583080 CNBD1Q8NA66 436 aa21.76■■□□□ 1.07
SREBF1-221ENST00000583080 PIP4K2AP48426 406 aaPredicted RBP21.75■■□□□ 1.07
SREBF1-221ENST00000583080 PHACTR3Q96KR7 559 aa21.75■■□□□ 1.07
SREBF1-221ENST00000583080 PDZRN3Q9UPQ7 1066 aa21.75■■□□□ 1.07
SREBF1-221ENST00000583080 CAPN15O75808 1086 aa21.74■■□□□ 1.07
SREBF1-221ENST00000583080 TAOK3Q9H2K8 898 aa21.74■■□□□ 1.07
SREBF1-221ENST00000583080 LTBP3Q9NS15 1303 aa21.74■■□□□ 1.07
SREBF1-221ENST00000583080 PRAMEF22A3QJZ6 481 aa21.73■■□□□ 1.07
SREBF1-221ENST00000583080 HSPA1AP0DMV8 641 aaKnown RBP21.73■■□□□ 1.07
SREBF1-221ENST00000583080 HSPA1BP0DMV9 641 aaKnown RBP21.73■■□□□ 1.07
SREBF1-221ENST00000583080 PRKAR2BP31323 418 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms