RNA–Protein interactions for RNA: ENST00000582818.5

ERBB2-213, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-213ENST00000582818 NRXN2Q9P2S2 1712 aa18.85■□□□□ 0.61
ERBB2-213ENST00000582818 MTHFSDQ2M296 383 aaKnown RBP18.84■□□□□ 0.61
ERBB2-213ENST00000582818 AFDNP55196 1824 aaKnown RBP18.84■□□□□ 0.61
ERBB2-213ENST00000582818 HMOX1P09601 288 aa18.83■□□□□ 0.6
ERBB2-213ENST00000582818 DDX10Q13206 875 aaKnown RBP18.83■□□□□ 0.6
ERBB2-213ENST00000582818 COL15A1P39059 1388 aa18.82■□□□□ 0.6
ERBB2-213ENST00000582818 ZC3H4Q9UPT8 1303 aaKnown RBP18.82■□□□□ 0.6
ERBB2-213ENST00000582818 STARD3NLO95772 234 aa18.82■□□□□ 0.6
ERBB2-213ENST00000582818 APLP1P51693 650 aa18.82■□□□□ 0.6
ERBB2-213ENST00000582818 CC2D1BQ5T0F9 858 aaKnown RBP18.82■□□□□ 0.6
ERBB2-213ENST00000582818 USPL1Q5W0Q7 1092 aa18.82■□□□□ 0.6
ERBB2-213ENST00000582818 TEX13AQ9BXU3 409 aaPredicted RBP18.82■□□□□ 0.6
ERBB2-213ENST00000582818 DLEC1Q9Y238 1755 aa18.81■□□□□ 0.6
ERBB2-213ENST00000582818 A0A087WZG4 1122 aa18.81■□□□□ 0.6
ERBB2-213ENST00000582818 GAS2L2Q8NHY3 880 aa18.81■□□□□ 0.6
ERBB2-213ENST00000582818 COL3A1P02461 1466 aaPredicted RBP18.8■□□□□ 0.6
ERBB2-213ENST00000582818 SLC39A6Q13433 755 aa18.8■□□□□ 0.6
ERBB2-213ENST00000582818 C9orf131Q5VYM1 1079 aa18.8■□□□□ 0.6
ERBB2-213ENST00000582818 TTC5Q8N0Z6 440 aa18.8■□□□□ 0.6
ERBB2-213ENST00000582818 KDM2BQ8NHM5 1336 aa18.79■□□□□ 0.6
ERBB2-213ENST00000582818 SIPA1L3O60292 1781 aaPredicted RBP18.79■□□□□ 0.6
ERBB2-213ENST00000582818 NFIXQ14938 502 aa18.79■□□□□ 0.6
ERBB2-213ENST00000582818 RBM46Q8TBY0 533 aaKnown RBP18.79■□□□□ 0.6
ERBB2-213ENST00000582818 PDZRN3Q9UPQ7 1066 aa18.79■□□□□ 0.6
ERBB2-213ENST00000582818 GNAT3A8MTJ3 354 aa18.78■□□□□ 0.6
ERBB2-213ENST00000582818 EIF5P55010 431 aaKnown RBP18.78■□□□□ 0.6
ERBB2-213ENST00000582818 ZBTB1Q9Y2K1 713 aa18.78■□□□□ 0.6
ERBB2-213ENST00000582818 TEFQ10587 303 aa18.77■□□□□ 0.6
ERBB2-213ENST00000582818 IFFO2Q5TF58 517 aa18.77■□□□□ 0.6
ERBB2-213ENST00000582818 TNRC6CQ9HCJ0 1690 aaKnown RBP18.76■□□□□ 0.59
ERBB2-213ENST00000582818 CHRNA5P30532 468 aa18.76■□□□□ 0.59
ERBB2-213ENST00000582818 FSTL1Q12841 308 aa18.76■□□□□ 0.59
ERBB2-213ENST00000582818 ZNF790Q6PG37 636 aa18.76■□□□□ 0.59
ERBB2-213ENST00000582818 BCL2L12Q9HB09 334 aa18.76■□□□□ 0.59
ERBB2-213ENST00000582818 SERPINB2P05120 415 aa18.75■□□□□ 0.59
ERBB2-213ENST00000582818 NMRK2Q9NPI5 230 aa18.75■□□□□ 0.59
ERBB2-213ENST00000582818 RNF181Q9P0P0 153 aa18.75■□□□□ 0.59
ERBB2-213ENST00000582818 CEMIPQ8WUJ3 1361 aa18.75■□□□□ 0.59
ERBB2-213ENST00000582818 HEG1Q9ULI3 1381 aa18.75■□□□□ 0.59
ERBB2-213ENST00000582818 RALBP1Q15311 655 aa18.74■□□□□ 0.59
ERBB2-213ENST00000582818 C16orf71Q8IYS4 520 aaPredicted RBP18.74■□□□□ 0.59
ERBB2-213ENST00000582818 TTLL6Q8N841 843 aa18.74■□□□□ 0.59
ERBB2-213ENST00000582818 IL17REQ8NFR9 667 aa18.74■□□□□ 0.59
ERBB2-213ENST00000582818 CFAP53Q96M91 514 aa18.74■□□□□ 0.59
ERBB2-213ENST00000582818 U2SURPO15042 1029 aaKnown RBP18.73■□□□□ 0.59
ERBB2-213ENST00000582818 IL6STP40189 918 aaPredicted RBP18.73■□□□□ 0.59
ERBB2-213ENST00000582818 ZNF496Q96IT1 587 aaPredicted RBP18.73■□□□□ 0.59
ERBB2-213ENST00000582818 H0YIN7 160 aa18.72■□□□□ 0.59
ERBB2-213ENST00000582818 LMNB1P20700 586 aa18.72■□□□□ 0.59
ERBB2-213ENST00000582818 CANXP27824 592 aaKnown RBP18.72■□□□□ 0.59
ERBB2-213ENST00000582818 FMNL2Q96PY5 1086 aa18.72■□□□□ 0.59
ERBB2-213ENST00000582818 SCN7AQ01118 1682 aa18.72■□□□□ 0.59
ERBB2-213ENST00000582818 CCDC88AQ3V6T2 1871 aa18.71■□□□□ 0.59
ERBB2-213ENST00000582818 DNAJC5GQ8N7S2 189 aa18.71■□□□□ 0.59
ERBB2-213ENST00000582818 BRIP1Q9BX63 1249 aa18.71■□□□□ 0.59
ERBB2-213ENST00000582818 NUDCQ9Y266 331 aa18.71■□□□□ 0.59
ERBB2-213ENST00000582818 PDE6BP35913 854 aa18.7■□□□□ 0.58
ERBB2-213ENST00000582818 CNGB1Q14028 1251 aaPredicted RBP18.7■□□□□ 0.58
ERBB2-213ENST00000582818 NPM2Q86SE8 214 aaKnown RBP18.7■□□□□ 0.58
ERBB2-213ENST00000582818 CARMIL3Q8ND23 1372 aa18.69■□□□□ 0.58
ERBB2-213ENST00000582818 WDR90Q96KV7 1748 aa18.69■□□□□ 0.58
ERBB2-213ENST00000582818 DICER1Q9UPY3 1922 aaKnown RBP18.69■□□□□ 0.58
ERBB2-213ENST00000582818 RGL2O15211 777 aa18.69■□□□□ 0.58
ERBB2-213ENST00000582818 C2CD5Q86YS7 1000 aa18.69■□□□□ 0.58
ERBB2-213ENST00000582818 ANKRD31Q8N7Z5 1873 aa18.69■□□□□ 0.58
ERBB2-213ENST00000582818 PPP2R1AP30153 589 aa18.68■□□□□ 0.58
ERBB2-213ENST00000582818 RSPH6AQ9H0K4 717 aa18.68■□□□□ 0.58
ERBB2-213ENST00000582818 GLTPD2A6NH11 291 aa18.67■□□□□ 0.58
ERBB2-213ENST00000582818 BTBD11A6QL63 1104 aa18.66■□□□□ 0.58
ERBB2-213ENST00000582818 HTATSF1O43719 755 aaKnown RBP18.66■□□□□ 0.58
ERBB2-213ENST00000582818 PRKAR2BP31323 418 aa18.66■□□□□ 0.58
ERBB2-213ENST00000582818 TBC1D9BQ66K14 1250 aa18.66■□□□□ 0.58
ERBB2-213ENST00000582818 CLEC4GQ6UXB4 293 aa18.66■□□□□ 0.58
ERBB2-213ENST00000582818 SMC1BQ8NDV3 1235 aa18.66■□□□□ 0.58
ERBB2-213ENST00000582818 FER1L6Q2WGJ9 1857 aa18.66■□□□□ 0.58
ERBB2-213ENST00000582818 BCORQ6W2J9 1755 aa18.65■□□□□ 0.58
ERBB2-213ENST00000582818 VEGFAP15692 232 aaPredicted RBP18.65■□□□□ 0.58
ERBB2-213ENST00000582818 PHACTR3Q96KR7 559 aa18.65■□□□□ 0.58
ERBB2-213ENST00000582818 SETDB2Q96T68 719 aa18.65■□□□□ 0.58
ERBB2-213ENST00000582818 RRAGCQ9HB90 399 aa18.65■□□□□ 0.58
ERBB2-213ENST00000582818 TIAM2Q8IVF5 1701 aa18.64■□□□□ 0.57
ERBB2-213ENST00000582818 CAMTA2O94983 1202 aa18.64■□□□□ 0.57
ERBB2-213ENST00000582818 PRR5LQ6MZQ0 368 aa18.64■□□□□ 0.57
ERBB2-213ENST00000582818 RTF1Q92541 710 aaKnown RBP18.64■□□□□ 0.57
ERBB2-213ENST00000582818 LTBP3Q9NS15 1303 aa18.64■□□□□ 0.57
ERBB2-213ENST00000582818 ARFGEF2Q9Y6D5 1785 aa18.63■□□□□ 0.57
ERBB2-213ENST00000582818 RASSF7Q02833 373 aa18.63■□□□□ 0.57
ERBB2-213ENST00000582818 SOGA3Q5TF21 947 aa18.63■□□□□ 0.57
ERBB2-213ENST00000582818 BICDL1Q6ZP65 573 aa18.63■□□□□ 0.57
ERBB2-213ENST00000582818 CNKSR1Q969H4 720 aa18.63■□□□□ 0.57
ERBB2-213ENST00000582818 TBC1D2BQ9UPU7 963 aa18.63■□□□□ 0.57
ERBB2-213ENST00000582818 NFKBIEO00221 500 aa18.62■□□□□ 0.57
ERBB2-213ENST00000582818 A1BGP04217 495 aa18.62■□□□□ 0.57
ERBB2-213ENST00000582818 SNRPA1P09661 255 aaKnown RBP18.62■□□□□ 0.57
ERBB2-213ENST00000582818 ST5P78524 1137 aa18.62■□□□□ 0.57
ERBB2-213ENST00000582818 STYK1Q6J9G0 422 aa18.62■□□□□ 0.57
ERBB2-213ENST00000582818 DPY19L2Q6NUT2 758 aa18.62■□□□□ 0.57
ERBB2-213ENST00000582818 JMYQ8N9B5 988 aa18.62■□□□□ 0.57
ERBB2-213ENST00000582818 CNBD1Q8NA66 436 aa18.62■□□□□ 0.57
ERBB2-213ENST00000582818 ZNF652Q9Y2D9 606 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms