RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 SRCIN1Q9C0H9 1055 aa14.02□□□□□ -0.17
GGA3-213ENST00000582486 USP44Q9H0E7 712 aa14.02□□□□□ -0.17
GGA3-213ENST00000582486 DCTPP1Q9H773 170 aa14.02□□□□□ -0.17
GGA3-213ENST00000582486 USP16Q9Y5T5 823 aa14.02□□□□□ -0.17
GGA3-213ENST00000582486 ADCY9O60503 1353 aa14.01□□□□□ -0.17
GGA3-213ENST00000582486 C5P01031 1676 aa14.01□□□□□ -0.17
GGA3-213ENST00000582486 BEND3Q5T5X7 828 aa14.01□□□□□ -0.17
GGA3-213ENST00000582486 NPM2Q86SE8 214 aaKnown RBP14□□□□□ -0.17
GGA3-213ENST00000582486 MAP3K2Q9Y2U5 619 aa14□□□□□ -0.17
GGA3-213ENST00000582486 MYL6BP14649 208 aa13.99□□□□□ -0.17
GGA3-213ENST00000582486 AIMP1Q12904 312 aaKnown RBP13.99□□□□□ -0.17
GGA3-213ENST00000582486 KSR2Q6VAB6 950 aa13.99□□□□□ -0.17
GGA3-213ENST00000582486 DISP2A7MBM2 1401 aa13.99□□□□□ -0.17
GGA3-213ENST00000582486 N4BP2Q86UW6 1770 aaPredicted RBP13.99□□□□□ -0.17
GGA3-213ENST00000582486 UBTFL1P0CB47 393 aaPredicted RBP13.98□□□□□ -0.17
GGA3-213ENST00000582486 ANP32AP39687 249 aaKnown RBP13.98□□□□□ -0.17
GGA3-213ENST00000582486 LRRFIP2Q9Y608 721 aaKnown RBP13.98□□□□□ -0.17
GGA3-213ENST00000582486 HMMRO75330 724 aa13.98□□□□□ -0.17
GGA3-213ENST00000582486 PIP4K2AP48426 406 aaPredicted RBP13.98□□□□□ -0.17
GGA3-213ENST00000582486 EXOC5O00471 708 aa13.97□□□□□ -0.17
GGA3-213ENST00000582486 PTCD1O75127 700 aaKnown RBP13.97□□□□□ -0.17
GGA3-213ENST00000582486 DDX58O95786 925 aaKnown RBP13.97□□□□□ -0.17
GGA3-213ENST00000582486 NBPF7P0C2Y1 421 aaPredicted RBP13.97□□□□□ -0.17
GGA3-213ENST00000582486 TMOD3Q9NYL9 352 aa13.97□□□□□ -0.17
GGA3-213ENST00000582486 PLCH1Q4KWH8 1693 aa13.97□□□□□ -0.17
GGA3-213ENST00000582486 PNMA6EA0A0J9YXQ4 647 aa13.96□□□□□ -0.17
GGA3-213ENST00000582486 COPS6Q7L5N1 327 aa13.96□□□□□ -0.17
GGA3-213ENST00000582486 LRP10Q7Z4F1 713 aa13.96□□□□□ -0.17
GGA3-213ENST00000582486 XAGE3Q8WTP9 111 aa13.96□□□□□ -0.17
GGA3-213ENST00000582486 SPATA31A1Q5TZJ5 1347 aa13.96□□□□□ -0.18
GGA3-213ENST00000582486 GLI3P10071 1580 aa13.96□□□□□ -0.18
GGA3-213ENST00000582486 ATP8B2P98198 1209 aa13.96□□□□□ -0.18
GGA3-213ENST00000582486 BCL11AQ9H165 835 aa13.96□□□□□ -0.18
GGA3-213ENST00000582486 TOGARAM1Q9Y4F4 1720 aa13.96□□□□□ -0.18
GGA3-213ENST00000582486 APBB1O00213 710 aa13.95□□□□□ -0.18
GGA3-213ENST00000582486 SEC24BO95487 1268 aa13.95□□□□□ -0.18
GGA3-213ENST00000582486 CWF19L2Q2TBE0 894 aaKnown RBP13.95□□□□□ -0.18
GGA3-213ENST00000582486 RIC3Q7Z5B4 369 aa13.95□□□□□ -0.18
GGA3-213ENST00000582486 PIGBQ92521 554 aa13.95□□□□□ -0.18
GGA3-213ENST00000582486 MSH5O43196 834 aa13.95□□□□□ -0.18
GGA3-213ENST00000582486 KCPQ6ZWJ8 1503 aa13.94□□□□□ -0.18
GGA3-213ENST00000582486 ALDH1L1O75891 902 aa13.94□□□□□ -0.18
GGA3-213ENST00000582486 ZBTB47Q9UFB7 747 aaPredicted RBP13.94□□□□□ -0.18
GGA3-213ENST00000582486 UBR2Q8IWV8 1755 aa13.94□□□□□ -0.18
GGA3-213ENST00000582486 NRAPQ86VF7 1730 aa13.94□□□□□ -0.18
GGA3-213ENST00000582486 SMARCA5O60264 1052 aaPredicted RBP13.93□□□□□ -0.18
GGA3-213ENST00000582486 AEBP2Q6ZN18 517 aaPredicted RBP13.93□□□□□ -0.18
GGA3-213ENST00000582486 C16orf71Q8IYS4 520 aaPredicted RBP13.93□□□□□ -0.18
GGA3-213ENST00000582486 LINS1Q8NG48 757 aa13.93□□□□□ -0.18
GGA3-213ENST00000582486 ASAP1Q9ULH1 1129 aa13.93□□□□□ -0.18
GGA3-213ENST00000582486 THRAP3Q9Y2W1 955 aaKnown RBP13.93□□□□□ -0.18
GGA3-213ENST00000582486 TNS2Q63HR2 1409 aa13.93□□□□□ -0.18
GGA3-213ENST00000582486 ANKRD13DQ6ZTN6 518 aa13.93□□□□□ -0.18
GGA3-213ENST00000582486 C9orf78Q9NZ63 289 aaPredicted RBP13.93□□□□□ -0.18
GGA3-213ENST00000582486 EXOC6BQ9Y2D4 811 aa13.93□□□□□ -0.18
GGA3-213ENST00000582486 CCDC9Q9Y3X0 531 aaKnown RBP13.93□□□□□ -0.18
GGA3-213ENST00000582486 PAPPAQ13219 1627 aa13.93□□□□□ -0.18
GGA3-213ENST00000582486 SLIT2O94813 1529 aa13.92□□□□□ -0.18
GGA3-213ENST00000582486 NBPF26B4DH59 902 aa13.92□□□□□ -0.18
GGA3-213ENST00000582486 NBPF14Q5TI25 921 aa13.92□□□□□ -0.18
GGA3-213ENST00000582486 NBPF10Q6P3W6 841 aaKnown RBP13.92□□□□□ -0.18
GGA3-213ENST00000582486 NBPF15Q8N660 670 aa13.92□□□□□ -0.18
GGA3-213ENST00000582486 CDCA7Q9BWT1 371 aaPredicted RBP13.92□□□□□ -0.18
GGA3-213ENST00000582486 KAT6BQ8WYB5 2073 aa13.92□□□□□ -0.18
GGA3-213ENST00000582486 SPATA31A5Q5VU36 1347 aa13.92□□□□□ -0.18
GGA3-213ENST00000582486 SPATA31A7Q8IWB4 1347 aa13.92□□□□□ -0.18
GGA3-213ENST00000582486 A1BGP04217 495 aa13.92□□□□□ -0.18
GGA3-213ENST00000582486 IGKV5-2P06315 115 aa13.92□□□□□ -0.18
GGA3-213ENST00000582486 PPP1R42Q7Z4L9 355 aa13.92□□□□□ -0.18
GGA3-213ENST00000582486 PLEKHM2Q8IWE5 1019 aa13.92□□□□□ -0.18
GGA3-213ENST00000582486 IPO9Q96P70 1041 aaKnown RBP13.92□□□□□ -0.18
GGA3-213ENST00000582486 LAMB4A4D0S4 1761 aa13.91□□□□□ -0.18
GGA3-213ENST00000582486 JCADQ9P266 1359 aa13.91□□□□□ -0.18
GGA3-213ENST00000582486 DDB1Q16531 1140 aa13.91□□□□□ -0.18
GGA3-213ENST00000582486 ATG3Q9NT62 314 aa13.91□□□□□ -0.18
GGA3-213ENST00000582486 NEXNQ0ZGT2 675 aa13.91□□□□□ -0.18
GGA3-213ENST00000582486 BMP2KLQ5H9B9 411 aa13.91□□□□□ -0.18
GGA3-213ENST00000582486 OTUD7AQ8TE49 926 aaPredicted RBP13.91□□□□□ -0.18
GGA3-213ENST00000582486 SSH3Q8TE77 659 aa13.91□□□□□ -0.18
GGA3-213ENST00000582486 SYTL4Q96C24 671 aaPredicted RBP13.91□□□□□ -0.18
GGA3-213ENST00000582486 C8orf37Q96NL8 207 aa13.91□□□□□ -0.18
GGA3-213ENST00000582486 MYD88Q99836 296 aa13.91□□□□□ -0.18
GGA3-213ENST00000582486 METTL22Q9BUU2 404 aaPredicted RBP13.91□□□□□ -0.18
GGA3-213ENST00000582486 ERBB4Q15303 1308 aa13.9□□□□□ -0.18
GGA3-213ENST00000582486 WNK3Q9BYP7 1800 aa13.9□□□□□ -0.18
GGA3-213ENST00000582486 CERKQ8TCT0 537 aa13.9□□□□□ -0.18
GGA3-213ENST00000582486 NEURL1BA8MQ27 555 aa13.9□□□□□ -0.18
GGA3-213ENST00000582486 GRM8O00222 908 aa13.9□□□□□ -0.18
GGA3-213ENST00000582486 SRGAP3O43295 1099 aa13.9□□□□□ -0.18
GGA3-213ENST00000582486 UNC5CLQ8IV45 518 aa13.9□□□□□ -0.18
GGA3-213ENST00000582486 NGLY1Q96IV0 654 aa13.9□□□□□ -0.18
GGA3-213ENST00000582486 ITGB4P16144 1822 aa13.9□□□□□ -0.18
GGA3-213ENST00000582486 BCL9O00512 1426 aa13.89□□□□□ -0.19
GGA3-213ENST00000582486 POLA2Q14181 598 aa13.89□□□□□ -0.19
GGA3-213ENST00000582486 NWD2Q9ULI1 1742 aa13.89□□□□□ -0.19
GGA3-213ENST00000582486 PRIM1P49642 420 aaKnown RBP13.89□□□□□ -0.19
GGA3-213ENST00000582486 RBM42Q9BTD8 480 aaKnown RBP13.89□□□□□ -0.19
GGA3-213ENST00000582486 IBTKQ9P2D0 1353 aaPredicted RBP13.88□□□□□ -0.19
GGA3-213ENST00000582486 BARGINQ6ZT62 677 aa13.88□□□□□ -0.19
GGA3-213ENST00000582486 TTLL7Q6ZT98 887 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms