RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 NARFQ9UHQ1 456 aa29.8■■■□□ 2.36
CASC3-207ENST00000581849 HTATSF1O43719 755 aaKnown RBP29.79■■■□□ 2.36
CASC3-207ENST00000581849 N4BP2Q86UW6 1770 aaPredicted RBP29.78■■■□□ 2.36
CASC3-207ENST00000581849 TM4SF1P30408 202 aa29.78■■■□□ 2.36
CASC3-207ENST00000581849 RTF1Q92541 710 aaKnown RBP29.78■■■□□ 2.36
CASC3-207ENST00000581849 FMNL2Q96PY5 1086 aa29.78■■■□□ 2.36
CASC3-207ENST00000581849 DDR1Q08345 913 aa29.77■■■□□ 2.36
CASC3-207ENST00000581849 USPL1Q5W0Q7 1092 aa29.77■■■□□ 2.36
CASC3-207ENST00000581849 BRCA1P38398 1863 aaKnown RBP29.76■■■□□ 2.36
CASC3-207ENST00000581849 BTBD11A6QL63 1104 aa29.76■■■□□ 2.35
CASC3-207ENST00000581849 EIF5P55010 431 aaKnown RBP29.75■■■□□ 2.35
CASC3-207ENST00000581849 A0A087WZG4 1122 aa29.74■■■□□ 2.35
CASC3-207ENST00000581849 POLRMTO00411 1230 aaKnown RBP29.74■■■□□ 2.35
CASC3-207ENST00000581849 ADCY9O60503 1353 aa29.74■■■□□ 2.35
CASC3-207ENST00000581849 NEFMP07197 916 aa29.73■■■□□ 2.35
CASC3-207ENST00000581849 A0A0G2JLW4 131 aa29.72■■■□□ 2.35
CASC3-207ENST00000581849 DPEP1P16444 411 aa29.72■■■□□ 2.35
CASC3-207ENST00000581849 CANXP27824 592 aaKnown RBP29.72■■■□□ 2.35
CASC3-207ENST00000581849 NRXN2Q9P2S2 1712 aa29.71■■■□□ 2.35
CASC3-207ENST00000581849 IL6STP40189 918 aaPredicted RBP29.71■■■□□ 2.35
CASC3-207ENST00000581849 RALBP1Q15311 655 aa29.71■■■□□ 2.35
CASC3-207ENST00000581849 BCL2L12Q9HB09 334 aa29.7■■■□□ 2.35
CASC3-207ENST00000581849 WWC3Q9ULE0 1092 aa29.7■■■□□ 2.35
CASC3-207ENST00000581849 NFIXQ14938 502 aa29.69■■■□□ 2.34
CASC3-207ENST00000581849 MCM10Q7L590 875 aa29.69■■■□□ 2.34
CASC3-207ENST00000581849 PNNQ9H307 717 aaKnown RBP29.69■■■□□ 2.34
CASC3-207ENST00000581849 ATP10DQ9P241 1426 aa29.69■■■□□ 2.34
CASC3-207ENST00000581849 BCS1LQ9Y276 419 aa29.68■■■□□ 2.34
CASC3-207ENST00000581849 SCN7AQ01118 1682 aa29.68■■■□□ 2.34
CASC3-207ENST00000581849 AFDNP55196 1824 aaKnown RBP29.68■■■□□ 2.34
CASC3-207ENST00000581849 ARFGEF1Q9Y6D6 1849 aa29.68■■■□□ 2.34
CASC3-207ENST00000581849 KCNA3P22001 575 aa29.67■■■□□ 2.34
CASC3-207ENST00000581849 KCNQ3O43525 872 aa29.66■■■□□ 2.34
CASC3-207ENST00000581849 PLEKHF1Q96S99 279 aa29.66■■■□□ 2.34
CASC3-207ENST00000581849 PIM2Q9P1W9 311 aa29.66■■■□□ 2.34
CASC3-207ENST00000581849 GIGYF1O75420 1035 aaPredicted RBP29.65■■■□□ 2.34
CASC3-207ENST00000581849 DLG5Q8TDM6 1919 aa29.65■■■□□ 2.34
CASC3-207ENST00000581849 SNRPA1P09661 255 aaKnown RBP29.63■■■□□ 2.33
CASC3-207ENST00000581849 C1QTNF8P60827 252 aa29.63■■■□□ 2.33
CASC3-207ENST00000581849 TAF7Q15545 349 aaPredicted RBP29.63■■■□□ 2.33
CASC3-207ENST00000581849 NPM2Q86SE8 214 aaKnown RBP29.63■■■□□ 2.33
CASC3-207ENST00000581849 SERPINB2P05120 415 aa29.62■■■□□ 2.33
CASC3-207ENST00000581849 DCTN1Q14203 1278 aa29.62■■■□□ 2.33
CASC3-207ENST00000581849 A1BGP04217 495 aa29.61■■■□□ 2.33
CASC3-207ENST00000581849 DALRD3Q5D0E6 543 aaKnown RBP29.61■■■□□ 2.33
CASC3-207ENST00000581849 PNISRQ8TF01 805 aaKnown RBP29.61■■■□□ 2.33
CASC3-207ENST00000581849 NFE2L2Q16236 605 aa29.6■■■□□ 2.33
CASC3-207ENST00000581849 USP16Q9Y5T5 823 aa29.6■■■□□ 2.33
CASC3-207ENST00000581849 MAPK8IP3Q9UPT6 1336 aa29.59■■■□□ 2.33
CASC3-207ENST00000581849 DDX10Q13206 875 aaKnown RBP29.58■■■□□ 2.33
CASC3-207ENST00000581849 BCORQ6W2J9 1755 aa29.58■■■□□ 2.33
CASC3-207ENST00000581849 GPBP1L1Q9HC44 474 aaPredicted RBP29.58■■■□□ 2.33
CASC3-207ENST00000581849 DLEC1Q9Y238 1755 aa29.58■■■□□ 2.33
CASC3-207ENST00000581849 ARHGAP27Q6ZUM4 889 aa29.57■■■□□ 2.32
CASC3-207ENST00000581849 TBC1D2BQ9UPU7 963 aa29.57■■■□□ 2.32
CASC3-207ENST00000581849 ZNF330Q9Y3S2 320 aaPredicted RBP29.57■■■□□ 2.32
CASC3-207ENST00000581849 KDM3BQ7LBC6 1761 aa29.57■■■□□ 2.32
CASC3-207ENST00000581849 MYBBP1AQ9BQG0 1328 aaKnown RBP29.56■■■□□ 2.32
CASC3-207ENST00000581849 RGL2O15211 777 aa29.56■■■□□ 2.32
CASC3-207ENST00000581849 CHRNA5P30532 468 aa29.56■■■□□ 2.32
CASC3-207ENST00000581849 CARMIL3Q8ND23 1372 aa29.55■■■□□ 2.32
CASC3-207ENST00000581849 LAMB4A4D0S4 1761 aa29.55■■■□□ 2.32
CASC3-207ENST00000581849 CAMTA2O94983 1202 aa29.55■■■□□ 2.32
CASC3-207ENST00000581849 TBC1D9BQ66K14 1250 aa29.55■■■□□ 2.32
CASC3-207ENST00000581849 PDZRN3Q9UPQ7 1066 aa29.55■■■□□ 2.32
CASC3-207ENST00000581849 DZIP3Q86Y13 1208 aaKnown RBP29.54■■■□□ 2.32
CASC3-207ENST00000581849 PRAMEF22A3QJZ6 481 aa29.53■■■□□ 2.32
CASC3-207ENST00000581849 BICDL1Q6ZP65 573 aa29.53■■■□□ 2.32
CASC3-207ENST00000581849 CLEC4GQ6UXB4 293 aa29.52■■■□□ 2.32
CASC3-207ENST00000581849 SETDB2Q96T68 719 aa29.5■■■□□ 2.31
CASC3-207ENST00000581849 BRIP1Q9BX63 1249 aa29.49■■■□□ 2.31
CASC3-207ENST00000581849 ZNF652Q9Y2D9 606 aa29.49■■■□□ 2.31
CASC3-207ENST00000581849 ANKRD31Q8N7Z5 1873 aa29.48■■■□□ 2.31
CASC3-207ENST00000581849 H0YIN7 160 aa29.48■■■□□ 2.31
CASC3-207ENST00000581849 C2CD5Q86YS7 1000 aa29.48■■■□□ 2.31
CASC3-207ENST00000581849 MIS18AQ9NYP9 233 aa29.48■■■□□ 2.31
CASC3-207ENST00000581849 NBPF26B4DH59 902 aa29.47■■■□□ 2.31
CASC3-207ENST00000581849 PDE6BP35913 854 aa29.47■■■□□ 2.31
CASC3-207ENST00000581849 PRR5LQ6MZQ0 368 aa29.47■■■□□ 2.31
CASC3-207ENST00000581849 NBPF10Q6P3W6 841 aaKnown RBP29.47■■■□□ 2.31
CASC3-207ENST00000581849 NBPF15Q8N660 670 aa29.47■■■□□ 2.31
CASC3-207ENST00000581849 EIF4A1P60842 406 aaKnown RBP29.46■■■□□ 2.31
CASC3-207ENST00000581849 TTLL6Q8N841 843 aa29.46■■■□□ 2.31
CASC3-207ENST00000581849 ZNF526Q8TF50 670 aaPredicted RBP29.46■■■□□ 2.31
CASC3-207ENST00000581849 PIP4K2AP48426 406 aaPredicted RBP29.45■■■□□ 2.31
CASC3-207ENST00000581849 LMOD3Q0VAK6 560 aa29.45■■■□□ 2.31
CASC3-207ENST00000581849 CNBD1Q8NA66 436 aa29.45■■■□□ 2.31
CASC3-207ENST00000581849 THUMPD2Q9BTF0 503 aaKnown RBP29.44■■■□□ 2.3
CASC3-207ENST00000581849 BABAM1Q9NWV8 329 aa29.44■■■□□ 2.3
CASC3-207ENST00000581849 SENP3-EIF4A1A0A087X0R7 540 aa29.43■■■□□ 2.3
CASC3-207ENST00000581849 C9orf131Q5VYM1 1079 aa29.43■■■□□ 2.3
CASC3-207ENST00000581849 SBF1O95248 1867 aa29.42■■■□□ 2.3
CASC3-207ENST00000581849 RIPK4P57078 832 aa29.42■■■□□ 2.3
CASC3-207ENST00000581849 ST5P78524 1137 aa29.42■■■□□ 2.3
CASC3-207ENST00000581849 TMPOP42166 694 aaKnown RBP29.41■■■□□ 2.3
CASC3-207ENST00000581849 COL11A2P13942 1736 aaPredicted RBP29.4■■■□□ 2.3
CASC3-207ENST00000581849 ERBB4Q15303 1308 aa29.4■■■□□ 2.3
CASC3-207ENST00000581849 ZC3H4Q9UPT8 1303 aaKnown RBP29.4■■■□□ 2.3
CASC3-207ENST00000581849 KIF3CO14782 793 aa29.39■■■□□ 2.3
CASC3-207ENST00000581849 NPHP1O15259 732 aa29.39■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms