RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 TM4SF1P30408 202 aa27.96■■■□□ 2.07
CCDC42-203ENST00000581598 U2AF1Q01081 240 aaKnown RBP eCLIP27.96■■■□□ 2.07
CCDC42-203ENST00000581598 NARFQ9UHQ1 456 aa27.96■■■□□ 2.07
CCDC42-203ENST00000581598 ADCY9O60503 1353 aa27.96■■■□□ 2.07
CCDC42-203ENST00000581598 HEG1Q9ULI3 1381 aa27.96■■■□□ 2.07
CCDC42-203ENST00000581598 STARD3NLO95772 234 aa27.95■■■□□ 2.06
CCDC42-203ENST00000581598 DDR1Q08345 913 aa27.95■■■□□ 2.06
CCDC42-203ENST00000581598 ZNF496Q96IT1 587 aaPredicted RBP27.95■■■□□ 2.06
CCDC42-203ENST00000581598 TEX13AQ9BXU3 409 aaPredicted RBP27.95■■■□□ 2.06
CCDC42-203ENST00000581598 USPL1Q5W0Q7 1092 aa27.94■■■□□ 2.06
CCDC42-203ENST00000581598 A0A0G2JLW4 131 aa27.93■■■□□ 2.06
CCDC42-203ENST00000581598 WWC3Q9ULE0 1092 aa27.93■■■□□ 2.06
CCDC42-203ENST00000581598 ATP10DQ9P241 1426 aa27.92■■■□□ 2.06
CCDC42-203ENST00000581598 POLRMTO00411 1230 aaKnown RBP27.92■■■□□ 2.06
CCDC42-203ENST00000581598 DPEP1P16444 411 aa27.92■■■□□ 2.06
CCDC42-203ENST00000581598 EIF5P55010 431 aaKnown RBP27.91■■■□□ 2.06
CCDC42-203ENST00000581598 FMNL2Q96PY5 1086 aa27.91■■■□□ 2.06
CCDC42-203ENST00000581598 NRXN2Q9P2S2 1712 aa27.91■■■□□ 2.06
CCDC42-203ENST00000581598 ARFGEF1Q9Y6D6 1849 aa27.9■■■□□ 2.06
CCDC42-203ENST00000581598 GIGYF1O75420 1035 aaPredicted RBP27.9■■■□□ 2.06
CCDC42-203ENST00000581598 HTATSF1O43719 755 aaKnown RBP27.89■■■□□ 2.06
CCDC42-203ENST00000581598 KCNA3P22001 575 aa27.89■■■□□ 2.06
CCDC42-203ENST00000581598 AFDNP55196 1824 aaKnown RBP27.89■■■□□ 2.06
CCDC42-203ENST00000581598 A0A087WZG4 1122 aa27.88■■■□□ 2.05
CCDC42-203ENST00000581598 BTBD11A6QL63 1104 aa27.88■■■□□ 2.05
CCDC42-203ENST00000581598 CANXP27824 592 aaKnown RBP27.88■■■□□ 2.05
CCDC42-203ENST00000581598 BCL2L12Q9HB09 334 aa27.88■■■□□ 2.05
CCDC42-203ENST00000581598 BCS1LQ9Y276 419 aa27.88■■■□□ 2.05
CCDC42-203ENST00000581598 RTF1Q92541 710 aaKnown RBP27.87■■■□□ 2.05
CCDC42-203ENST00000581598 NFIXQ14938 502 aa27.86■■■□□ 2.05
CCDC42-203ENST00000581598 PIM2Q9P1W9 311 aa27.85■■■□□ 2.05
CCDC42-203ENST00000581598 SCN7AQ01118 1682 aa27.84■■■□□ 2.05
CCDC42-203ENST00000581598 IL6STP40189 918 aaPredicted RBP27.84■■■□□ 2.05
CCDC42-203ENST00000581598 KCNQ3O43525 872 aa27.83■■■□□ 2.05
CCDC42-203ENST00000581598 MCM10Q7L590 875 aa27.82■■■□□ 2.04
CCDC42-203ENST00000581598 DLG5Q8TDM6 1919 aa27.81■■■□□ 2.04
CCDC42-203ENST00000581598 GPBP1L1Q9HC44 474 aaPredicted RBP27.81■■■□□ 2.04
CCDC42-203ENST00000581598 CEP350Q5VT06 3117 aa27.81■■■□□ 2.04
CCDC42-203ENST00000581598 SERPINB2P05120 415 aa27.8■■■□□ 2.04
CCDC42-203ENST00000581598 DLEC1Q9Y238 1755 aa27.8■■■□□ 2.04
CCDC42-203ENST00000581598 NEFMP07197 916 aa27.79■■■□□ 2.04
CCDC42-203ENST00000581598 DALRD3Q5D0E6 543 aaKnown RBP27.79■■■□□ 2.04
CCDC42-203ENST00000581598 A1BGP04217 495 aa27.78■■■□□ 2.04
CCDC42-203ENST00000581598 ARHGAP27Q6ZUM4 889 aa27.78■■■□□ 2.04
CCDC42-203ENST00000581598 PLEKHF1Q96S99 279 aa27.78■■■□□ 2.04
CCDC42-203ENST00000581598 SNRPA1P09661 255 aaKnown RBP27.77■■■□□ 2.04
CCDC42-203ENST00000581598 CHRNA5P30532 468 aa27.77■■■□□ 2.04
CCDC42-203ENST00000581598 DCTN1Q14203 1278 aa27.77■■■□□ 2.04
CCDC42-203ENST00000581598 BCORQ6W2J9 1755 aa27.76■■■□□ 2.03
CCDC42-203ENST00000581598 RALBP1Q15311 655 aa27.76■■■□□ 2.03
CCDC42-203ENST00000581598 PNNQ9H307 717 aaKnown RBP27.76■■■□□ 2.03
CCDC42-203ENST00000581598 USP16Q9Y5T5 823 aa27.76■■■□□ 2.03
CCDC42-203ENST00000581598 TAF7Q15545 349 aaPredicted RBP27.75■■■□□ 2.03
CCDC42-203ENST00000581598 NPM2Q86SE8 214 aaKnown RBP27.74■■■□□ 2.03
CCDC42-203ENST00000581598 TBC1D2BQ9UPU7 963 aa27.74■■■□□ 2.03
CCDC42-203ENST00000581598 TBC1D9BQ66K14 1250 aa27.73■■■□□ 2.03
CCDC42-203ENST00000581598 KDM3BQ7LBC6 1761 aa27.73■■■□□ 2.03
CCDC42-203ENST00000581598 CAMTA2O94983 1202 aa27.72■■■□□ 2.03
CCDC42-203ENST00000581598 ZNF330Q9Y3S2 320 aaPredicted RBP27.72■■■□□ 2.03
CCDC42-203ENST00000581598 CARMIL3Q8ND23 1372 aa27.72■■■□□ 2.03
CCDC42-203ENST00000581598 PRAMEF22A3QJZ6 481 aa27.71■■■□□ 2.03
CCDC42-203ENST00000581598 ZNF316A6NFI3 1004 aaPredicted RBP27.71■■■□□ 2.03
CCDC42-203ENST00000581598 NFE2L2Q16236 605 aa27.71■■■□□ 2.03
CCDC42-203ENST00000581598 BICDL1Q6ZP65 573 aa27.71■■■□□ 2.03
CCDC42-203ENST00000581598 ANKRD31Q8N7Z5 1873 aa27.71■■■□□ 2.03
CCDC42-203ENST00000581598 PNISRQ8TF01 805 aaKnown RBP27.71■■■□□ 2.03
CCDC42-203ENST00000581598 ZNF526Q8TF50 670 aaPredicted RBP27.71■■■□□ 2.03
CCDC42-203ENST00000581598 LAMB4A4D0S4 1761 aa27.71■■■□□ 2.03
CCDC42-203ENST00000581598 PDZRN3Q9UPQ7 1066 aa27.7■■■□□ 2.02
CCDC42-203ENST00000581598 SBF1O95248 1867 aa27.7■■■□□ 2.02
CCDC42-203ENST00000581598 DZIP3Q86Y13 1208 aaKnown RBP27.69■■■□□ 2.02
CCDC42-203ENST00000581598 RGL2O15211 777 aa27.68■■■□□ 2.02
CCDC42-203ENST00000581598 MAPK8IP3Q9UPT6 1336 aa27.67■■■□□ 2.02
CCDC42-203ENST00000581598 CLEC4GQ6UXB4 293 aa27.67■■■□□ 2.02
CCDC42-203ENST00000581598 BRIP1Q9BX63 1249 aa27.67■■■□□ 2.02
CCDC42-203ENST00000581598 H0YIN7 160 aa27.66■■■□□ 2.02
CCDC42-203ENST00000581598 KIF3CO14782 793 aa27.66■■■□□ 2.02
CCDC42-203ENST00000581598 C9orf131Q5VYM1 1079 aa27.66■■■□□ 2.02
CCDC42-203ENST00000581598 PRR5LQ6MZQ0 368 aa27.66■■■□□ 2.02
CCDC42-203ENST00000581598 C2CD5Q86YS7 1000 aa27.66■■■□□ 2.02
CCDC42-203ENST00000581598 TTLL6Q8N841 843 aa27.66■■■□□ 2.02
CCDC42-203ENST00000581598 SETDB2Q96T68 719 aa27.66■■■□□ 2.02
CCDC42-203ENST00000581598 NBPF26B4DH59 902 aa27.64■■■□□ 2.02
CCDC42-203ENST00000581598 PDE6BP35913 854 aa27.64■■■□□ 2.02
CCDC42-203ENST00000581598 PIP4K2AP48426 406 aaPredicted RBP27.64■■■□□ 2.02
CCDC42-203ENST00000581598 DDX10Q13206 875 aaKnown RBP27.64■■■□□ 2.02
CCDC42-203ENST00000581598 NBPF10Q6P3W6 841 aaKnown RBP27.64■■■□□ 2.02
CCDC42-203ENST00000581598 NBPF15Q8N660 670 aa27.64■■■□□ 2.02
CCDC42-203ENST00000581598 MIS18AQ9NYP9 233 aa27.64■■■□□ 2.02
CCDC42-203ENST00000581598 MYBBP1AQ9BQG0 1328 aaKnown RBP27.63■■■□□ 2.01
CCDC42-203ENST00000581598 COL11A2P13942 1736 aaPredicted RBP27.62■■■□□ 2.01
CCDC42-203ENST00000581598 ZNF652Q9Y2D9 606 aa27.62■■■□□ 2.01
CCDC42-203ENST00000581598 CNBD1Q8NA66 436 aa27.61■■■□□ 2.01
CCDC42-203ENST00000581598 EIF4A1P60842 406 aaKnown RBP27.6■■■□□ 2.01
CCDC42-203ENST00000581598 RNF181Q9P0P0 153 aa27.6■■■□□ 2.01
CCDC42-203ENST00000581598 ZC3H4Q9UPT8 1303 aaKnown RBP27.59■■■□□ 2.01
CCDC42-203ENST00000581598 ST5P78524 1137 aa27.58■■■□□ 2.01
CCDC42-203ENST00000581598 THUMPD2Q9BTF0 503 aaKnown RBP27.58■■■□□ 2.01
CCDC42-203ENST00000581598 ARFGEF2Q9Y6D5 1785 aa27.56■■■□□ 2
CCDC42-203ENST00000581598 HSPA6P17066 643 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms