RNA–Protein interactions for RNA: ENST00000581477.1

DDX42-213, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-213ENST00000581477 IL16Q14005 1332 aa9.31□□□□□ -0.92
DDX42-213ENST00000581477 SPATA31A1Q5TZJ5 1347 aa9.31□□□□□ -0.92
DDX42-213ENST00000581477 SPATA31A5Q5VU36 1347 aa9.31□□□□□ -0.92
DDX42-213ENST00000581477 SPATA31A7Q8IWB4 1347 aa9.31□□□□□ -0.92
DDX42-213ENST00000581477 RGL2O15211 777 aa9.3□□□□□ -0.92
DDX42-213ENST00000581477 CENPBP07199 599 aaPredicted RBP9.3□□□□□ -0.92
DDX42-213ENST00000581477 IL2RBP14784 551 aa9.3□□□□□ -0.92
DDX42-213ENST00000581477 SLFN5Q08AF3 891 aa9.3□□□□□ -0.92
DDX42-213ENST00000581477 BARGINQ6ZT62 677 aa9.3□□□□□ -0.92
DDX42-213ENST00000581477 BCL11BQ9C0K0 894 aaPredicted RBP9.3□□□□□ -0.92
DDX42-213ENST00000581477 SPG7Q9UQ90 795 aa9.3□□□□□ -0.92
DDX42-213ENST00000581477 MAP3K5Q99683 1374 aa9.29□□□□□ -0.92
DDX42-213ENST00000581477 GNAT3A8MTJ3 354 aa9.29□□□□□ -0.92
DDX42-213ENST00000581477 AKAP4Q5JQC9 854 aa9.29□□□□□ -0.92
DDX42-213ENST00000581477 CDCA7Q9BWT1 371 aaPredicted RBP9.29□□□□□ -0.92
DDX42-213ENST00000581477 USP21Q9UK80 565 aa9.29□□□□□ -0.92
DDX42-213ENST00000581477 ADAMTS7Q9UKP4 1686 aa9.29□□□□□ -0.92
DDX42-213ENST00000581477 E9PSI1 815 aa9.28□□□□□ -0.92
DDX42-213ENST00000581477 ZNF853P0CG23 659 aa9.28□□□□□ -0.92
DDX42-213ENST00000581477 CALD1Q05682 793 aaKnown RBP9.28□□□□□ -0.92
DDX42-213ENST00000581477 MEX3CQ5U5Q3 659 aaKnown RBP9.28□□□□□ -0.92
DDX42-213ENST00000581477 ZNF530Q6P9A1 599 aaPredicted RBP9.28□□□□□ -0.92
DDX42-213ENST00000581477 CDCA7LQ96GN5 454 aa9.28□□□□□ -0.92
DDX42-213ENST00000581477 WNK3Q9BYP7 1800 aa9.28□□□□□ -0.92
DDX42-213ENST00000581477 AFF2P51816 1311 aa9.28□□□□□ -0.92
DDX42-213ENST00000581477 CEMIPQ8WUJ3 1361 aa9.27□□□□□ -0.93
DDX42-213ENST00000581477 CYP27B1O15528 508 aa9.27□□□□□ -0.93
DDX42-213ENST00000581477 NUDT7P0C024 238 aa9.27□□□□□ -0.93
DDX42-213ENST00000581477 PHKG2P15735 406 aa9.27□□□□□ -0.93
DDX42-213ENST00000581477 NKX1-1Q15270 411 aaPredicted RBP9.27□□□□□ -0.93
DDX42-213ENST00000581477 C1orf141Q5JVX7 400 aa9.27□□□□□ -0.93
DDX42-213ENST00000581477 DUSP27Q5VZP5 1158 aa9.27□□□□□ -0.93
DDX42-213ENST00000581477 IFNL2Q8IZJ0 200 aa9.27□□□□□ -0.93
DDX42-213ENST00000581477 IL17REQ8NFR9 667 aa9.27□□□□□ -0.93
DDX42-213ENST00000581477 ZCRB1Q8TBF4 217 aaKnown RBP9.27□□□□□ -0.93
DDX42-213ENST00000581477 RTF1Q92541 710 aaKnown RBP9.27□□□□□ -0.93
DDX42-213ENST00000581477 USP35Q9P2H5 1018 aa9.27□□□□□ -0.93
DDX42-213ENST00000581477 LHX6Q9UPM6 363 aa9.27□□□□□ -0.93
DDX42-213ENST00000581477 ATRNO75882 1429 aa9.27□□□□□ -0.93
DDX42-213ENST00000581477 SHANK3Q9BYB0 1731 aa9.27□□□□□ -0.93
DDX42-213ENST00000581477 LRRC37A3O60309 1634 aa9.27□□□□□ -0.93
DDX42-213ENST00000581477 ONECUT3O60422 494 aaPredicted RBP9.26□□□□□ -0.93
DDX42-213ENST00000581477 DCTN1Q14203 1278 aa9.26□□□□□ -0.93
DDX42-213ENST00000581477 LAPTM4AQ15012 233 aa9.26□□□□□ -0.93
DDX42-213ENST00000581477 MCM10Q7L590 875 aa9.26□□□□□ -0.93
DDX42-213ENST00000581477 CFAP44Q96MT7 982 aa9.26□□□□□ -0.93
DDX42-213ENST00000581477 IFT57Q9NWB7 429 aa9.26□□□□□ -0.93
DDX42-213ENST00000581477 PCDH11XQ9BZA7 1347 aa9.26□□□□□ -0.93
DDX42-213ENST00000581477 PCDH11YQ9BZA8 1340 aa9.26□□□□□ -0.93
DDX42-213ENST00000581477 SCN11AQ9UI33 1791 aa9.25□□□□□ -0.93
DDX42-213ENST00000581477 STK25O00506 426 aa9.25□□□□□ -0.93
DDX42-213ENST00000581477 CHL1O00533 1208 aa9.25□□□□□ -0.93
DDX42-213ENST00000581477 RNMTO43148 476 aaKnown RBP9.25□□□□□ -0.93
DDX42-213ENST00000581477 HSP90AB1P08238 724 aaKnown RBP9.25□□□□□ -0.93
DDX42-213ENST00000581477 GNAI1P63096 354 aa9.25□□□□□ -0.93
DDX42-213ENST00000581477 DCAF5Q96JK2 942 aa9.25□□□□□ -0.93
DDX42-213ENST00000581477 MS4A4AQ96JQ5 239 aa9.25□□□□□ -0.93
DDX42-213ENST00000581477 GJD4Q96KN9 370 aaPredicted RBP9.25□□□□□ -0.93
DDX42-213ENST00000581477 THUMPD2Q9BTF0 503 aaKnown RBP9.25□□□□□ -0.93
DDX42-213ENST00000581477 MYH16Q9H6N6 1097 aa9.25□□□□□ -0.93
DDX42-213ENST00000581477 LGR6Q9HBX8 967 aa9.25□□□□□ -0.93
DDX42-213ENST00000581477 BABAM1Q9NWV8 329 aa9.25□□□□□ -0.93
DDX42-213ENST00000581477 TRPC5Q9UL62 973 aaPredicted RBP9.25□□□□□ -0.93
DDX42-213ENST00000581477 STK24Q9Y6E0 443 aa9.25□□□□□ -0.93
DDX42-213ENST00000581477 VIRMAQ69YN4 1812 aaKnown RBP9.25□□□□□ -0.93
DDX42-213ENST00000581477 EXOC5O00471 708 aa9.24□□□□□ -0.93
DDX42-213ENST00000581477 TAF7Q15545 349 aaPredicted RBP9.24□□□□□ -0.93
DDX42-213ENST00000581477 FBXO22Q8NEZ5 403 aa9.24□□□□□ -0.93
DDX42-213ENST00000581477 CCDC9Q9Y3X0 531 aaKnown RBP9.24□□□□□ -0.93
DDX42-213ENST00000581477 GLI3P10071 1580 aa9.24□□□□□ -0.93
DDX42-213ENST00000581477 KDM6AO15550 1401 aaPredicted RBP9.23□□□□□ -0.93
DDX42-213ENST00000581477 TNS2Q63HR2 1409 aa9.23□□□□□ -0.93
DDX42-213ENST00000581477 THSD7AQ9UPZ6 1657 aa9.23□□□□□ -0.93
DDX42-213ENST00000581477 SIPA1L3O60292 1781 aaPredicted RBP9.23□□□□□ -0.93
DDX42-213ENST00000581477 PSDA5PKW4 1024 aaPredicted RBP9.23□□□□□ -0.93
DDX42-213ENST00000581477 PTPN5P54829 565 aa9.23□□□□□ -0.93
DDX42-213ENST00000581477 ZNF772Q68DY9 489 aaPredicted RBP9.23□□□□□ -0.93
DDX42-213ENST00000581477 MPRIPQ6WCQ1 1025 aa9.23□□□□□ -0.93
DDX42-213ENST00000581477 QTRT2Q9H974 415 aaKnown RBP9.23□□□□□ -0.93
DDX42-213ENST00000581477 MRC1P22897 1456 aa9.22□□□□□ -0.93
DDX42-213ENST00000581477 ERVV-2B6SEH9 535 aa9.22□□□□□ -0.93
DDX42-213ENST00000581477 CT47B1P0C2W7 299 aaPredicted RBP9.22□□□□□ -0.93
DDX42-213ENST00000581477 DDB1Q16531 1140 aa9.22□□□□□ -0.93
DDX42-213ENST00000581477 DDX54Q8TDD1 881 aaKnown RBP9.22□□□□□ -0.93
DDX42-213ENST00000581477 MBIPQ9NS73 344 aa9.22□□□□□ -0.93
DDX42-213ENST00000581477 FANCIQ9NVI1 1328 aa9.22□□□□□ -0.93
DDX42-213ENST00000581477 TEFQ10587 303 aa9.21□□□□□ -0.94
DDX42-213ENST00000581477 FAM98CQ17RN3 349 aaKnown RBP9.21□□□□□ -0.94
DDX42-213ENST00000581477 TRAF7Q6Q0C0 670 aa9.21□□□□□ -0.94
DDX42-213ENST00000581477 TSR2Q969E8 191 aaKnown RBP9.21□□□□□ -0.94
DDX42-213ENST00000581477 SLC52A2Q9HAB3 445 aa9.21□□□□□ -0.94
DDX42-213ENST00000581477 KDM3BQ7LBC6 1761 aa9.2□□□□□ -0.94
DDX42-213ENST00000581477 HS6ST3Q8IZP7 471 aa9.2□□□□□ -0.94
DDX42-213ENST00000581477 MARCH10Q8NA82 808 aaPredicted RBP9.2□□□□□ -0.94
DDX42-213ENST00000581477 MFRPQ9BY79 579 aa9.2□□□□□ -0.94
DDX42-213ENST00000581477 LAS1LQ9Y4W2 734 aaKnown RBP9.2□□□□□ -0.94
DDX42-213ENST00000581477 RBM6P78332 1123 aaKnown RBP9.19□□□□□ -0.94
DDX42-213ENST00000581477 EXOSC9Q06265 439 aaKnown RBP9.19□□□□□ -0.94
DDX42-213ENST00000581477 NFATC2IPQ8NCF5 419 aa9.19□□□□□ -0.94
DDX42-213ENST00000581477 ZNF428Q96B54 188 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms