RNA–Protein interactions for RNA: ENST00000581393.5

RBFOX3-205, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 1,201 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-205ENST00000581393 U2AF1Q01081 240 aaKnown RBP eCLIP22.24■■□□□ 1.15
RBFOX3-205ENST00000581393 ZNF496Q96IT1 587 aaPredicted RBP22.24■■□□□ 1.15
RBFOX3-205ENST00000581393 C4AP0C0L4 1744 aa22.23■■□□□ 1.15
RBFOX3-205ENST00000581393 KCNQ3O43525 872 aa22.23■■□□□ 1.15
RBFOX3-205ENST00000581393 BICDL1Q6ZP65 573 aa22.23■■□□□ 1.15
RBFOX3-205ENST00000581393 KCPQ6ZWJ8 1503 aa22.22■■□□□ 1.15
RBFOX3-205ENST00000581393 NFIXQ14938 502 aa22.22■■□□□ 1.15
RBFOX3-205ENST00000581393 RSPH6AQ9H0K4 717 aa22.22■■□□□ 1.15
RBFOX3-205ENST00000581393 PIM2Q9P1W9 311 aa22.22■■□□□ 1.15
RBFOX3-205ENST00000581393 NARFQ9UHQ1 456 aa22.22■■□□□ 1.15
RBFOX3-205ENST00000581393 NUDCQ9Y266 331 aa22.22■■□□□ 1.15
RBFOX3-205ENST00000581393 MRC1P22897 1456 aa22.22■■□□□ 1.15
RBFOX3-205ENST00000581393 STARD3NLO95772 234 aa22.21■■□□□ 1.15
RBFOX3-205ENST00000581393 ZNF790Q6PG37 636 aa22.21■■□□□ 1.15
RBFOX3-205ENST00000581393 VSIG10Q8N0Z9 540 aa22.21■■□□□ 1.15
RBFOX3-205ENST00000581393 BCL2L12Q9HB09 334 aa22.21■■□□□ 1.15
RBFOX3-205ENST00000581393 ADCY9O60503 1353 aa22.21■■□□□ 1.15
RBFOX3-205ENST00000581393 COL15A1P39059 1388 aa22.21■■□□□ 1.15
RBFOX3-205ENST00000581393 DALRD3Q5D0E6 543 aaKnown RBP22.2■■□□□ 1.14
RBFOX3-205ENST00000581393 TBC1D2BQ9UPU7 963 aa22.19■■□□□ 1.14
RBFOX3-205ENST00000581393 BTBD11A6QL63 1104 aa22.18■■□□□ 1.14
RBFOX3-205ENST00000581393 A1BGP04217 495 aa22.18■■□□□ 1.14
RBFOX3-205ENST00000581393 SERPINB2P05120 415 aa22.18■■□□□ 1.14
RBFOX3-205ENST00000581393 DCTN1Q14203 1278 aa22.18■■□□□ 1.14
RBFOX3-205ENST00000581393 MCM10Q7L590 875 aa22.18■■□□□ 1.14
RBFOX3-205ENST00000581393 KIAA1551Q9HCM1 1747 aa22.17■■□□□ 1.14
RBFOX3-205ENST00000581393 PIP4K2AP48426 406 aaPredicted RBP22.17■■□□□ 1.14
RBFOX3-205ENST00000581393 C9orf131Q5VYM1 1079 aa22.17■■□□□ 1.14
RBFOX3-205ENST00000581393 CCDC24Q8N4L8 307 aa22.17■■□□□ 1.14
RBFOX3-205ENST00000581393 KIF13BQ9NQT8 1826 aa22.17■■□□□ 1.14
RBFOX3-205ENST00000581393 HEG1Q9ULI3 1381 aa22.16■■□□□ 1.14
RBFOX3-205ENST00000581393 EIF5P55010 431 aaKnown RBP22.16■■□□□ 1.14
RBFOX3-205ENST00000581393 FMNL2Q96PY5 1086 aa22.16■■□□□ 1.14
RBFOX3-205ENST00000581393 VIRMAQ69YN4 1812 aaKnown RBP22.15■■□□□ 1.14
RBFOX3-205ENST00000581393 PRAMEF22A3QJZ6 481 aa22.14■■□□□ 1.13
RBFOX3-205ENST00000581393 TBC1D9BQ66K14 1250 aa22.14■■□□□ 1.13
RBFOX3-205ENST00000581393 RTF1Q92541 710 aaKnown RBP22.14■■□□□ 1.13
RBFOX3-205ENST00000581393 ADAMTS7Q9UKP4 1686 aa22.14■■□□□ 1.13
RBFOX3-205ENST00000581393 KIF3CO14782 793 aa22.13■■□□□ 1.13
RBFOX3-205ENST00000581393 TEX13AQ9BXU3 409 aaPredicted RBP22.13■■□□□ 1.13
RBFOX3-205ENST00000581393 USP16Q9Y5T5 823 aa22.13■■□□□ 1.13
RBFOX3-205ENST00000581393 A0A087WZG4 1122 aa22.12■■□□□ 1.13
RBFOX3-205ENST00000581393 C2CD5Q86YS7 1000 aa22.12■■□□□ 1.13
RBFOX3-205ENST00000581393 MIS18AQ9NYP9 233 aa22.12■■□□□ 1.13
RBFOX3-205ENST00000581393 NPM2Q86SE8 214 aaKnown RBP22.11■■□□□ 1.13
RBFOX3-205ENST00000581393 NMRK2Q9NPI5 230 aa22.11■■□□□ 1.13
RBFOX3-205ENST00000581393 RNF181Q9P0P0 153 aa22.11■■□□□ 1.13
RBFOX3-205ENST00000581393 CEMIPQ8WUJ3 1361 aa22.11■■□□□ 1.13
RBFOX3-205ENST00000581393 ZNF219Q9P2Y4 722 aaPredicted RBP22.09■■□□□ 1.13
RBFOX3-205ENST00000581393 IL6STP40189 918 aaPredicted RBP22.08■■□□□ 1.13
RBFOX3-205ENST00000581393 RASSF7Q02833 373 aa22.08■■□□□ 1.13
RBFOX3-205ENST00000581393 CARMIL3Q8ND23 1372 aa22.08■■□□□ 1.12
RBFOX3-205ENST00000581393 H0YIN7 160 aa22.07■■□□□ 1.12
RBFOX3-205ENST00000581393 ZNF622Q969S3 477 aaKnown RBP eCLIP22.07■■□□□ 1.12
RBFOX3-205ENST00000581393 UBR2Q8IWV8 1755 aa22.07■■□□□ 1.12
RBFOX3-205ENST00000581393 CEP350Q5VT06 3117 aa22.06■■□□□ 1.12
RBFOX3-205ENST00000581393 NPHP1O15259 732 aa22.06■■□□□ 1.12
RBFOX3-205ENST00000581393 HSPA6P17066 643 aa22.06■■□□□ 1.12
RBFOX3-205ENST00000581393 TTLL6Q8N841 843 aa22.06■■□□□ 1.12
RBFOX3-205ENST00000581393 CAMTA2O94983 1202 aa22.05■■□□□ 1.12
RBFOX3-205ENST00000581393 DZIP3Q86Y13 1208 aaKnown RBP22.05■■□□□ 1.12
RBFOX3-205ENST00000581393 SNRPA1P09661 255 aaKnown RBP22.04■■□□□ 1.12
RBFOX3-205ENST00000581393 SETDB2Q96T68 719 aa22.04■■□□□ 1.12
RBFOX3-205ENST00000581393 BRCA1P38398 1863 aaKnown RBP22.03■■□□□ 1.12
RBFOX3-205ENST00000581393 TAF7Q15545 349 aaPredicted RBP22.03■■□□□ 1.12
RBFOX3-205ENST00000581393 PRR5LQ6MZQ0 368 aa22.03■■□□□ 1.12
RBFOX3-205ENST00000581393 THUMPD2Q9BTF0 503 aaKnown RBP22.03■■□□□ 1.12
RBFOX3-205ENST00000581393 RRAGCQ9HB90 399 aa22.03■■□□□ 1.12
RBFOX3-205ENST00000581393 AFDNP55196 1824 aaKnown RBP22.03■■□□□ 1.12
RBFOX3-205ENST00000581393 PRELPP51888 382 aa22.02■■□□□ 1.12
RBFOX3-205ENST00000581393 FAM177BA6PVY3 158 aa22.01■■□□□ 1.11
RBFOX3-205ENST00000581393 NEFMP07197 916 aa22.01■■□□□ 1.11
RBFOX3-205ENST00000581393 NGEFQ8N5V2 710 aa22.01■■□□□ 1.11
RBFOX3-205ENST00000581393 SIPA1L3O60292 1781 aaPredicted RBP22.01■■□□□ 1.11
RBFOX3-205ENST00000581393 NBPF26B4DH59 902 aa22■■□□□ 1.11
RBFOX3-205ENST00000581393 HTATSF1O43719 755 aaKnown RBP22■■□□□ 1.11
RBFOX3-205ENST00000581393 C21orf2O43822 256 aa22■■□□□ 1.11
RBFOX3-205ENST00000581393 TOMM70O94826 608 aa22■■□□□ 1.11
RBFOX3-205ENST00000581393 NBPF10Q6P3W6 841 aaKnown RBP22■■□□□ 1.11
RBFOX3-205ENST00000581393 NBPF15Q8N660 670 aa22■■□□□ 1.11
RBFOX3-205ENST00000581393 BRIP1Q9BX63 1249 aa22■■□□□ 1.11
RBFOX3-205ENST00000581393 PDE6BP35913 854 aa21.99■■□□□ 1.11
RBFOX3-205ENST00000581393 C16orf71Q8IYS4 520 aaPredicted RBP21.99■■□□□ 1.11
RBFOX3-205ENST00000581393 CNBD1Q8NA66 436 aa21.99■■□□□ 1.11
RBFOX3-205ENST00000581393 PLEKHF1Q96S99 279 aa21.98■■□□□ 1.11
RBFOX3-205ENST00000581393 ARFGEF1Q9Y6D6 1849 aa21.98■■□□□ 1.11
RBFOX3-205ENST00000581393 LMNB1P20700 586 aa21.97■■□□□ 1.11
RBFOX3-205ENST00000581393 KDM2BQ8NHM5 1336 aa21.97■■□□□ 1.11
RBFOX3-205ENST00000581393 ST5P78524 1137 aa21.96■■□□□ 1.11
RBFOX3-205ENST00000581393 DDX10Q13206 875 aaKnown RBP21.96■■□□□ 1.11
RBFOX3-205ENST00000581393 NBPF5PQ86XG9 351 aaPredicted RBP21.96■■□□□ 1.11
RBFOX3-205ENST00000581393 NRXN2Q9P2S2 1712 aa21.95■■□□□ 1.1
RBFOX3-205ENST00000581393 NFKBIEO00221 500 aa21.95■■□□□ 1.1
RBFOX3-205ENST00000581393 NFE2L2Q16236 605 aa21.95■■□□□ 1.1
RBFOX3-205ENST00000581393 RRP7AQ9Y3A4 280 aaKnown RBP21.95■■□□□ 1.1
RBFOX3-205ENST00000581393 HLFQ16534 295 aa21.94■■□□□ 1.1
RBFOX3-205ENST00000581393 NIP7Q9Y221 180 aaKnown RBP eCLIP21.94■■□□□ 1.1
RBFOX3-205ENST00000581393 HTRA3P83110 453 aa21.93■■□□□ 1.1
RBFOX3-205ENST00000581393 MAPK8IP3Q9UPT6 1336 aa21.93■■□□□ 1.1
RBFOX3-205ENST00000581393 MYL6BP14649 208 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms