RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 SCN11AQ9UI33 1791 aa14.35□□□□□ -0.11
RFFL-209ENST00000581265 CYP19A1P11511 503 aaPredicted RBP14.35□□□□□ -0.11
RFFL-209ENST00000581265 DDR1Q08345 913 aa14.35□□□□□ -0.11
RFFL-209ENST00000581265 CC2D1BQ5T0F9 858 aaKnown RBP14.35□□□□□ -0.11
RFFL-209ENST00000581265 RNF181Q9P0P0 153 aa14.35□□□□□ -0.11
RFFL-209ENST00000581265 PIM2Q9P1W9 311 aa14.35□□□□□ -0.11
RFFL-209ENST00000581265 KIAA1551Q9HCM1 1747 aa14.35□□□□□ -0.11
RFFL-209ENST00000581265 ZPR1O75312 459 aa14.34□□□□□ -0.11
RFFL-209ENST00000581265 SLC39A6Q13433 755 aa14.34□□□□□ -0.11
RFFL-209ENST00000581265 VSIG10Q8N0Z9 540 aa14.34□□□□□ -0.11
RFFL-209ENST00000581265 SOS1Q07889 1333 aaPredicted RBP14.34□□□□□ -0.11
RFFL-209ENST00000581265 N4BP2Q86UW6 1770 aaPredicted RBP14.34□□□□□ -0.11
RFFL-209ENST00000581265 NPC1L1Q9UHC9 1359 aa14.34□□□□□ -0.11
RFFL-209ENST00000581265 KCPQ6ZWJ8 1503 aa14.33□□□□□ -0.12
RFFL-209ENST00000581265 POLRMTO00411 1230 aaKnown RBP14.33□□□□□ -0.12
RFFL-209ENST00000581265 MRC1P22897 1456 aa14.32□□□□□ -0.12
RFFL-209ENST00000581265 DALRD3Q5D0E6 543 aaKnown RBP14.32□□□□□ -0.12
RFFL-209ENST00000581265 USPL1Q5W0Q7 1092 aa14.32□□□□□ -0.12
RFFL-209ENST00000581265 NARFQ9UHQ1 456 aa14.32□□□□□ -0.12
RFFL-209ENST00000581265 TJP1Q07157 1748 aa14.32□□□□□ -0.12
RFFL-209ENST00000581265 NFIXQ14938 502 aa14.3□□□□□ -0.12
RFFL-209ENST00000581265 IL17REQ8NFR9 667 aa14.3□□□□□ -0.12
RFFL-209ENST00000581265 ZBTB1Q9Y2K1 713 aa14.3□□□□□ -0.12
RFFL-209ENST00000581265 ADAMTS7Q9UKP4 1686 aa14.3□□□□□ -0.12
RFFL-209ENST00000581265 STARD3NLO95772 234 aa14.29□□□□□ -0.12
RFFL-209ENST00000581265 CHRNA5P30532 468 aa14.29□□□□□ -0.12
RFFL-209ENST00000581265 BCL2L12Q9HB09 334 aa14.29□□□□□ -0.12
RFFL-209ENST00000581265 BRCA1P38398 1863 aaKnown RBP14.29□□□□□ -0.12
RFFL-209ENST00000581265 GNAT3A8MTJ3 354 aa14.28□□□□□ -0.12
RFFL-209ENST00000581265 U2SURPO15042 1029 aaKnown RBP14.28□□□□□ -0.12
RFFL-209ENST00000581265 COL15A1P39059 1388 aa14.28□□□□□ -0.12
RFFL-209ENST00000581265 TTC5Q8N0Z6 440 aa14.28□□□□□ -0.12
RFFL-209ENST00000581265 GAS2L2Q8NHY3 880 aa14.28□□□□□ -0.12
RFFL-209ENST00000581265 SERPINB2P05120 415 aa14.27□□□□□ -0.13
RFFL-209ENST00000581265 VEGFAP15692 232 aaPredicted RBP14.27□□□□□ -0.13
RFFL-209ENST00000581265 CANXP27824 592 aaKnown RBP14.27□□□□□ -0.13
RFFL-209ENST00000581265 EIF5P55010 431 aaKnown RBP14.27□□□□□ -0.13
RFFL-209ENST00000581265 TEFQ10587 303 aa14.27□□□□□ -0.13
RFFL-209ENST00000581265 ZNF790Q6PG37 636 aa14.27□□□□□ -0.13
RFFL-209ENST00000581265 TEX13AQ9BXU3 409 aaPredicted RBP14.27□□□□□ -0.13
RFFL-209ENST00000581265 COL3A1P02461 1466 aaPredicted RBP14.26□□□□□ -0.13
RFFL-209ENST00000581265 ZNF496Q96IT1 587 aaPredicted RBP14.26□□□□□ -0.13
RFFL-209ENST00000581265 ARFGEF1Q9Y6D6 1849 aa14.26□□□□□ -0.13
RFFL-209ENST00000581265 A0A087WZG4 1122 aa14.25□□□□□ -0.13
RFFL-209ENST00000581265 AIDAQ96BJ3 306 aa14.25□□□□□ -0.13
RFFL-209ENST00000581265 PCDH10Q9P2E7 1040 aa14.25□□□□□ -0.13
RFFL-209ENST00000581265 CNGB1Q14028 1251 aaPredicted RBP14.24□□□□□ -0.13
RFFL-209ENST00000581265 PHACTR3Q96KR7 559 aa14.24□□□□□ -0.13
RFFL-209ENST00000581265 TNRC6CQ9HCJ0 1690 aaKnown RBP14.23□□□□□ -0.13
RFFL-209ENST00000581265 CEMIPQ8WUJ3 1361 aa14.23□□□□□ -0.13
RFFL-209ENST00000581265 HEG1Q9ULI3 1381 aa14.23□□□□□ -0.13
RFFL-209ENST00000581265 VIRMAQ69YN4 1812 aaKnown RBP14.23□□□□□ -0.13
RFFL-209ENST00000581265 MKRN1Q9UHC7 482 aaKnown RBP14.23□□□□□ -0.13
RFFL-209ENST00000581265 UBR2Q8IWV8 1755 aa14.22□□□□□ -0.13
RFFL-209ENST00000581265 H0YIN7 160 aa14.22□□□□□ -0.13
RFFL-209ENST00000581265 IL6STP40189 918 aaPredicted RBP14.22□□□□□ -0.13
RFFL-209ENST00000581265 TTLL6Q8N841 843 aa14.22□□□□□ -0.13
RFFL-209ENST00000581265 CFAP53Q96M91 514 aa14.22□□□□□ -0.13
RFFL-209ENST00000581265 FMNL2Q96PY5 1086 aa14.22□□□□□ -0.13
RFFL-209ENST00000581265 RSPH6AQ9H0K4 717 aa14.22□□□□□ -0.13
RFFL-209ENST00000581265 NRXN2Q9P2S2 1712 aa14.21□□□□□ -0.13
RFFL-209ENST00000581265 ZC3H4Q9UPT8 1303 aaKnown RBP14.21□□□□□ -0.13
RFFL-209ENST00000581265 PRKAR2BP31323 418 aa14.21□□□□□ -0.13
RFFL-209ENST00000581265 TBC1D9BQ66K14 1250 aa14.21□□□□□ -0.13
RFFL-209ENST00000581265 BICDL1Q6ZP65 573 aa14.21□□□□□ -0.13
RFFL-209ENST00000581265 C2CD5Q86YS7 1000 aa14.21□□□□□ -0.13
RFFL-209ENST00000581265 PRDM10Q9NQV6 1147 aa14.21□□□□□ -0.13
RFFL-209ENST00000581265 NUDCQ9Y266 331 aa14.21□□□□□ -0.13
RFFL-209ENST00000581265 AFDNP55196 1824 aaKnown RBP14.2□□□□□ -0.14
RFFL-209ENST00000581265 GLTPD2A6NH11 291 aa14.2□□□□□ -0.14
RFFL-209ENST00000581265 BTBD11A6QL63 1104 aa14.2□□□□□ -0.14
RFFL-209ENST00000581265 FOXN1O15353 648 aa14.2□□□□□ -0.14
RFFL-209ENST00000581265 A1BGP04217 495 aa14.2□□□□□ -0.14
RFFL-209ENST00000581265 LMNB1P20700 586 aa14.2□□□□□ -0.14
RFFL-209ENST00000581265 CTCFP49711 727 aaPredicted RBP14.2□□□□□ -0.14
RFFL-209ENST00000581265 RASSF7Q02833 373 aa14.2□□□□□ -0.14
RFFL-209ENST00000581265 FAM161AQ3B820 660 aa14.2□□□□□ -0.14
RFFL-209ENST00000581265 BRIP1Q9BX63 1249 aa14.2□□□□□ -0.14
RFFL-209ENST00000581265 PDZRN3Q9UPQ7 1066 aa14.2□□□□□ -0.14
RFFL-209ENST00000581265 TBC1D2BQ9UPU7 963 aa14.2□□□□□ -0.14
RFFL-209ENST00000581265 KCNQ3O43525 872 aa14.19□□□□□ -0.14
RFFL-209ENST00000581265 DPY19L2Q6NUT2 758 aa14.19□□□□□ -0.14
RFFL-209ENST00000581265 SBF1O95248 1867 aa14.18□□□□□ -0.14
RFFL-209ENST00000581265 PPP2R1AP30153 589 aa14.18□□□□□ -0.14
RFFL-209ENST00000581265 PDE6BP35913 854 aa14.18□□□□□ -0.14
RFFL-209ENST00000581265 PRR5LQ6MZQ0 368 aa14.18□□□□□ -0.14
RFFL-209ENST00000581265 NPM2Q86SE8 214 aaKnown RBP14.18□□□□□ -0.14
RFFL-209ENST00000581265 CREBZFQ9NS37 354 aa14.18□□□□□ -0.14
RFFL-209ENST00000581265 ZNF330Q9Y3S2 320 aaPredicted RBP14.18□□□□□ -0.14
RFFL-209ENST00000581265 USP16Q9Y5T5 823 aa14.18□□□□□ -0.14
RFFL-209ENST00000581265 CARMIL3Q8ND23 1372 aa14.18□□□□□ -0.14
RFFL-209ENST00000581265 CAMTA2O94983 1202 aa14.17□□□□□ -0.14
RFFL-209ENST00000581265 U2AF1L5P0DN76 240 aaPredicted RBP14.17□□□□□ -0.14
RFFL-209ENST00000581265 U2AF1Q01081 240 aaKnown RBP eCLIP14.17□□□□□ -0.14
RFFL-209ENST00000581265 SETDB2Q96T68 719 aa14.17□□□□□ -0.14
RFFL-209ENST00000581265 SIPA1L3O60292 1781 aaPredicted RBP14.17□□□□□ -0.14
RFFL-209ENST00000581265 NFKBIEO00221 500 aa14.16□□□□□ -0.14
RFFL-209ENST00000581265 HTATSF1O43719 755 aaKnown RBP14.16□□□□□ -0.14
RFFL-209ENST00000581265 RTF1Q92541 710 aaKnown RBP14.16□□□□□ -0.14
RFFL-209ENST00000581265 SNRPA1P09661 255 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms