RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 PRPF40AO75400 957 aaKnown RBP5.08□□□□□ -1.6
RTTN-206ENST00000581161 CSB-PGBD3P0DP91 1061 aa5.08□□□□□ -1.6
RTTN-206ENST00000581161 PLCD4Q9BRC7 762 aa5.08□□□□□ -1.6
RTTN-206ENST00000581161 MINK1Q8N4C8 1332 aaPredicted RBP5.08□□□□□ -1.6
RTTN-206ENST00000581161 NUP188Q5SRE5 1749 aa5.08□□□□□ -1.6
RTTN-206ENST00000581161 GOLGA6L7A0A1B0GV03 622 aa5.08□□□□□ -1.6
RTTN-206ENST00000581161 NF2P35240 595 aa5.08□□□□□ -1.6
RTTN-206ENST00000581161 TMPOP42166 694 aaKnown RBP5.08□□□□□ -1.6
RTTN-206ENST00000581161 CLEC17AQ6ZS10 378 aa5.08□□□□□ -1.6
RTTN-206ENST00000581161 DEF6Q9H4E7 631 aa5.08□□□□□ -1.6
RTTN-206ENST00000581161 ANKRD62A6NC57 917 aa5.08□□□□□ -1.6
RTTN-206ENST00000581161 RAD21O60216 631 aa5.08□□□□□ -1.6
RTTN-206ENST00000581161 RAB3GAP1Q15042 981 aa5.08□□□□□ -1.6
RTTN-206ENST00000581161 SEPT7Q16181 437 aaKnown RBP5.08□□□□□ -1.6
RTTN-206ENST00000581161 FOXD4L6Q3SYB3 417 aaPredicted RBP5.08□□□□□ -1.6
RTTN-206ENST00000581161 SOGA3Q5TF21 947 aa5.08□□□□□ -1.6
RTTN-206ENST00000581161 FOXD4L3Q6VB84 417 aaPredicted RBP5.08□□□□□ -1.6
RTTN-206ENST00000581161 ZSCAN30Q86W11 494 aa5.08□□□□□ -1.6
RTTN-206ENST00000581161 SMC5Q8IY18 1101 aa5.08□□□□□ -1.6
RTTN-206ENST00000581161 TOMM22Q9NS69 142 aa5.08□□□□□ -1.6
RTTN-206ENST00000581161 NUCB1Q02818 461 aa5.08□□□□□ -1.6
RTTN-206ENST00000581161 RNF214Q8ND24 703 aa5.08□□□□□ -1.6
RTTN-206ENST00000581161 THUMPD2Q9BTF0 503 aaKnown RBP5.08□□□□□ -1.6
RTTN-206ENST00000581161 METP08581 1390 aa5.08□□□□□ -1.6
RTTN-206ENST00000581161 HMOX1P09601 288 aa5.08□□□□□ -1.6
RTTN-206ENST00000581161 ZNHIT6Q9NWK9 470 aaKnown RBP5.08□□□□□ -1.6
RTTN-206ENST00000581161 ZNF330Q9Y3S2 320 aaPredicted RBP5.08□□□□□ -1.6
RTTN-206ENST00000581161 PRR36Q9H6K5 1346 aa5.07□□□□□ -1.6
RTTN-206ENST00000581161 XPCQ01831 940 aaPredicted RBP5.07□□□□□ -1.6
RTTN-206ENST00000581161 TBC1D9Q6ZT07 1266 aa5.07□□□□□ -1.6
RTTN-206ENST00000581161 CT47B1P0C2W7 299 aaPredicted RBP5.07□□□□□ -1.6
RTTN-206ENST00000581161 GAS2L2Q8NHY3 880 aa5.07□□□□□ -1.6
RTTN-206ENST00000581161 PRKAR2BP31323 418 aa5.07□□□□□ -1.6
RTTN-206ENST00000581161 HDGFL2Q7Z4V5 671 aaPredicted RBP5.07□□□□□ -1.6
RTTN-206ENST00000581161 SNX21Q969T3 373 aa5.07□□□□□ -1.6
RTTN-206ENST00000581161 GCC1Q96CN9 775 aa5.07□□□□□ -1.6
RTTN-206ENST00000581161 TERF2IPQ9NYB0 399 aa5.07□□□□□ -1.6
RTTN-206ENST00000581161 ANKRD18BA2A2Z9 1011 aa5.07□□□□□ -1.6
RTTN-206ENST00000581161 CD2BP2O95400 341 aaKnown RBP5.07□□□□□ -1.6
RTTN-206ENST00000581161 CLASRPQ8N2M8 674 aaKnown RBP5.07□□□□□ -1.6
RTTN-206ENST00000581161 RBM27Q9P2N5 1060 aaKnown RBP5.07□□□□□ -1.6
RTTN-206ENST00000581161 ST18O60284 1047 aa5.06□□□□□ -1.6
RTTN-206ENST00000581161 BAG4O95429 457 aaKnown RBP5.06□□□□□ -1.6
RTTN-206ENST00000581161 IDI1Q13907 227 aa5.06□□□□□ -1.6
RTTN-206ENST00000581161 SYNE3Q6ZMZ3 975 aa5.06□□□□□ -1.6
RTTN-206ENST00000581161 MPNDQ8N594 471 aa5.06□□□□□ -1.6
RTTN-206ENST00000581161 TSPYL1Q9H0U9 437 aa5.06□□□□□ -1.6
RTTN-206ENST00000581161 EIF3JO75822 258 aaKnown RBP5.06□□□□□ -1.6
RTTN-206ENST00000581161 SLU7O95391 586 aaKnown RBP5.06□□□□□ -1.6
RTTN-206ENST00000581161 RBM25P49756 843 aaKnown RBP5.06□□□□□ -1.6
RTTN-206ENST00000581161 RABEP1Q15276 862 aa5.06□□□□□ -1.6
RTTN-206ENST00000581161 BMP2KLQ5H9B9 411 aa5.06□□□□□ -1.6
RTTN-206ENST00000581161 A0A1B0GUL6 1792 aa5.06□□□□□ -1.6
RTTN-206ENST00000581161 SCN11AQ9UI33 1791 aa5.06□□□□□ -1.6
RTTN-206ENST00000581161 ZBTB40Q9NUA8 1239 aa5.06□□□□□ -1.6
RTTN-206ENST00000581161 UQCRHP07919 91 aa5.06□□□□□ -1.6
RTTN-206ENST00000581161 NUCB2P80303 420 aa5.06□□□□□ -1.6
RTTN-206ENST00000581161 CCAR2Q8N163 923 aaKnown RBP5.06□□□□□ -1.6
RTTN-206ENST00000581161 PRPF31Q8WWY3 499 aaKnown RBP5.06□□□□□ -1.6
RTTN-206ENST00000581161 RTF1Q92541 710 aaKnown RBP5.06□□□□□ -1.6
RTTN-206ENST00000581161 LRP5O75197 1615 aa5.06□□□□□ -1.6
RTTN-206ENST00000581161 WNK3Q9BYP7 1800 aa5.06□□□□□ -1.6
RTTN-206ENST00000581161 C5P01031 1676 aa5.06□□□□□ -1.6
RTTN-206ENST00000581161 RGPD2P0DJD1 1756 aa5.06□□□□□ -1.6
RTTN-206ENST00000581161 DYDC1Q8WWB3 177 aa5.06□□□□□ -1.6
RTTN-206ENST00000581161 CEP63Q96MT8 703 aa5.06□□□□□ -1.6
RTTN-206ENST00000581161 EPS15P42566 896 aa5.05□□□□□ -1.6
RTTN-206ENST00000581161 KLHL40Q2TBA0 621 aa5.05□□□□□ -1.6
RTTN-206ENST00000581161 STRCQ7RTU9 1775 aa5.05□□□□□ -1.6
RTTN-206ENST00000581161 SYCP1Q15431 976 aa5.05□□□□□ -1.6
RTTN-206ENST00000581161 ZSCAN23Q3MJ62 389 aa5.05□□□□□ -1.6
RTTN-206ENST00000581161 TCHPQ9BT92 498 aa5.05□□□□□ -1.6
RTTN-206ENST00000581161 LTN1O94822 1766 aa5.05□□□□□ -1.6
RTTN-206ENST00000581161 SYCE3A1L190 88 aa5.05□□□□□ -1.6
RTTN-206ENST00000581161 SF3A1Q15459 793 aaKnown RBP5.05□□□□□ -1.6
RTTN-206ENST00000581161 HOOK1Q9UJC3 728 aaKnown RBP5.05□□□□□ -1.6
RTTN-206ENST00000581161 DHX16O60231 1041 aaKnown RBP5.05□□□□□ -1.6
RTTN-206ENST00000581161 INTS3Q68E01 1043 aaKnown RBP5.05□□□□□ -1.6
RTTN-206ENST00000581161 CCDC39Q9UFE4 941 aa5.05□□□□□ -1.6
RTTN-206ENST00000581161 RTL1A6NKG5 1358 aa5.05□□□□□ -1.6
RTTN-206ENST00000581161 SMARCA5O60264 1052 aaPredicted RBP5.05□□□□□ -1.6
RTTN-206ENST00000581161 ERLIN2O94905 339 aa5.05□□□□□ -1.6
RTTN-206ENST00000581161 GBP2P32456 591 aaPredicted RBP5.05□□□□□ -1.6
RTTN-206ENST00000581161 NAP1L1P55209 391 aaKnown RBP5.05□□□□□ -1.6
RTTN-206ENST00000581161 TWISTNBQ3B726 338 aaPredicted RBP5.05□□□□□ -1.6
RTTN-206ENST00000581161 ZNF646O15015 1829 aaPredicted RBP5.05□□□□□ -1.6
RTTN-206ENST00000581161 FBLN1P23142 703 aa5.05□□□□□ -1.6
RTTN-206ENST00000581161 FBXW7Q969H0 707 aa5.05□□□□□ -1.6
RTTN-206ENST00000581161 TOGARAM1Q9Y4F4 1720 aa5.04□□□□□ -1.6
RTTN-206ENST00000581161 API5Q9BZZ5 524 aaKnown RBP5.04□□□□□ -1.6
RTTN-206ENST00000581161 CHMP3Q9Y3E7 222 aa5.04□□□□□ -1.6
RTTN-206ENST00000581161 CEMIPQ8WUJ3 1361 aa5.04□□□□□ -1.6
RTTN-206ENST00000581161 RFX1P22670 979 aa5.04□□□□□ -1.6
RTTN-206ENST00000581161 GNAI1P63096 354 aa5.04□□□□□ -1.6
RTTN-206ENST00000581161 ATP6V1E1P36543 226 aa5.04□□□□□ -1.6
RTTN-206ENST00000581161 ALDH1L2Q3SY69 923 aa5.04□□□□□ -1.6
RTTN-206ENST00000581161 SLC4A10Q6U841 1118 aa5.04□□□□□ -1.6
RTTN-206ENST00000581161 SSX2IPQ9Y2D8 614 aa5.04□□□□□ -1.6
RTTN-206ENST00000581161 OFD1O75665 1012 aa5.04□□□□□ -1.6
RTTN-206ENST00000581161 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms