RNA–Protein interactions for RNA: ENST00000580997.1

SENP3-204, Transcript of SUMO specific peptidase 3, humanhuman

TSL 2

Gene SENP3, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-204ENST00000580997 TM4SF1P30408 202 aa16.71■□□□□ 0.27
SENP3-204ENST00000580997 TEFQ10587 303 aa16.71■□□□□ 0.27
SENP3-204ENST00000580997 ZNF790Q6PG37 636 aa16.71■□□□□ 0.27
SENP3-204ENST00000580997 PXDNLA1KZ92 1463 aa16.71■□□□□ 0.27
SENP3-204ENST00000580997 VIRMAQ69YN4 1812 aaKnown RBP16.69■□□□□ 0.26
SENP3-204ENST00000580997 A0A0G2JLW4 131 aa16.69■□□□□ 0.26
SENP3-204ENST00000580997 U2AF1L5P0DN76 240 aaPredicted RBP16.69■□□□□ 0.26
SENP3-204ENST00000580997 U2AF1Q01081 240 aaKnown RBP eCLIP16.69■□□□□ 0.26
SENP3-204ENST00000580997 TTC5Q8N0Z6 440 aa16.69■□□□□ 0.26
SENP3-204ENST00000580997 ZNF496Q96IT1 587 aaPredicted RBP16.69■□□□□ 0.26
SENP3-204ENST00000580997 NARFQ9UHQ1 456 aa16.69■□□□□ 0.26
SENP3-204ENST00000580997 ZBTB1Q9Y2K1 713 aa16.69■□□□□ 0.26
SENP3-204ENST00000580997 UBR2Q8IWV8 1755 aa16.69■□□□□ 0.26
SENP3-204ENST00000580997 KIAA1551Q9HCM1 1747 aa16.68■□□□□ 0.26
SENP3-204ENST00000580997 ABCB7O75027 752 aa16.68■□□□□ 0.26
SENP3-204ENST00000580997 ZPR1O75312 459 aa16.68■□□□□ 0.26
SENP3-204ENST00000580997 STARD3NLO95772 234 aa16.68■□□□□ 0.26
SENP3-204ENST00000580997 KCNA3P22001 575 aa16.68■□□□□ 0.26
SENP3-204ENST00000580997 DDR1Q08345 913 aa16.68■□□□□ 0.26
SENP3-204ENST00000580997 USPL1Q5W0Q7 1092 aa16.68■□□□□ 0.26
SENP3-204ENST00000580997 TEX13AQ9BXU3 409 aaPredicted RBP16.68■□□□□ 0.26
SENP3-204ENST00000580997 POLRMTO00411 1230 aaKnown RBP16.67■□□□□ 0.26
SENP3-204ENST00000580997 WWC3Q9ULE0 1092 aa16.67■□□□□ 0.26
SENP3-204ENST00000580997 ADCY9O60503 1353 aa16.66■□□□□ 0.26
SENP3-204ENST00000580997 COL15A1P39059 1388 aa16.66■□□□□ 0.26
SENP3-204ENST00000580997 HEG1Q9ULI3 1381 aa16.66■□□□□ 0.26
SENP3-204ENST00000580997 DPEP1P16444 411 aa16.66■□□□□ 0.26
SENP3-204ENST00000580997 EIF5P55010 431 aaKnown RBP16.66■□□□□ 0.26
SENP3-204ENST00000580997 C1QTNF8P60827 252 aa16.66■□□□□ 0.26
SENP3-204ENST00000580997 BCL2L12Q9HB09 334 aa16.66■□□□□ 0.26
SENP3-204ENST00000580997 SIPA1L3O60292 1781 aaPredicted RBP16.66■□□□□ 0.26
SENP3-204ENST00000580997 HTATSF1O43719 755 aaKnown RBP16.65■□□□□ 0.26
SENP3-204ENST00000580997 BTBD11A6QL63 1104 aa16.64■□□□□ 0.25
SENP3-204ENST00000580997 CANXP27824 592 aaKnown RBP16.64■□□□□ 0.25
SENP3-204ENST00000580997 FMNL2Q96PY5 1086 aa16.64■□□□□ 0.25
SENP3-204ENST00000580997 ATP10DQ9P241 1426 aa16.63■□□□□ 0.25
SENP3-204ENST00000580997 A0A087WZG4 1122 aa16.63■□□□□ 0.25
SENP3-204ENST00000580997 GIGYF1O75420 1035 aaPredicted RBP16.63■□□□□ 0.25
SENP3-204ENST00000580997 NFIXQ14938 502 aa16.63■□□□□ 0.25
SENP3-204ENST00000580997 RTF1Q92541 710 aaKnown RBP16.63■□□□□ 0.25
SENP3-204ENST00000580997 BCS1LQ9Y276 419 aa16.63■□□□□ 0.25
SENP3-204ENST00000580997 N4BP2Q86UW6 1770 aaPredicted RBP16.62■□□□□ 0.25
SENP3-204ENST00000580997 KCNQ3O43525 872 aa16.62■□□□□ 0.25
SENP3-204ENST00000580997 IL6STP40189 918 aaPredicted RBP16.62■□□□□ 0.25
SENP3-204ENST00000580997 MCM10Q7L590 875 aa16.62■□□□□ 0.25
SENP3-204ENST00000580997 PIM2Q9P1W9 311 aa16.62■□□□□ 0.25
SENP3-204ENST00000580997 PLEKHF1Q96S99 279 aa16.6■□□□□ 0.25
SENP3-204ENST00000580997 BRCA1P38398 1863 aaKnown RBP16.59■□□□□ 0.25
SENP3-204ENST00000580997 A1BGP04217 495 aa16.59■□□□□ 0.25
SENP3-204ENST00000580997 SERPINB2P05120 415 aa16.59■□□□□ 0.25
SENP3-204ENST00000580997 DCTN1Q14203 1278 aa16.59■□□□□ 0.25
SENP3-204ENST00000580997 DALRD3Q5D0E6 543 aaKnown RBP16.59■□□□□ 0.25
SENP3-204ENST00000580997 USP16Q9Y5T5 823 aa16.59■□□□□ 0.25
SENP3-204ENST00000580997 CHRNA5P30532 468 aa16.58■□□□□ 0.24
SENP3-204ENST00000580997 TAF7Q15545 349 aaPredicted RBP16.58■□□□□ 0.24
SENP3-204ENST00000580997 NCBP3Q53F19 620 aaKnown RBP16.58■□□□□ 0.24
SENP3-204ENST00000580997 ARHGAP27Q6ZUM4 889 aa16.58■□□□□ 0.24
SENP3-204ENST00000580997 GPBP1L1Q9HC44 474 aaPredicted RBP16.58■□□□□ 0.24
SENP3-204ENST00000580997 NRXN2Q9P2S2 1712 aa16.58■□□□□ 0.24
SENP3-204ENST00000580997 SNRPA1P09661 255 aaKnown RBP16.57■□□□□ 0.24
SENP3-204ENST00000580997 RALBP1Q15311 655 aa16.57■□□□□ 0.24
SENP3-204ENST00000580997 TBC1D2BQ9UPU7 963 aa16.57■□□□□ 0.24
SENP3-204ENST00000580997 TBC1D9BQ66K14 1250 aa16.56■□□□□ 0.24
SENP3-204ENST00000580997 PRAMEF22A3QJZ6 481 aa16.55■□□□□ 0.24
SENP3-204ENST00000580997 NEFMP07197 916 aa16.55■□□□□ 0.24
SENP3-204ENST00000580997 PNNQ9H307 717 aaKnown RBP16.55■□□□□ 0.24
SENP3-204ENST00000580997 CAMTA2O94983 1202 aa16.54■□□□□ 0.24
SENP3-204ENST00000580997 NFE2L2Q16236 605 aa16.54■□□□□ 0.24
SENP3-204ENST00000580997 ZNF219Q9P2Y4 722 aaPredicted RBP16.54■□□□□ 0.24
SENP3-204ENST00000580997 AFDNP55196 1824 aaKnown RBP16.54■□□□□ 0.24
SENP3-204ENST00000580997 ARFGEF1Q9Y6D6 1849 aa16.54■□□□□ 0.24
SENP3-204ENST00000580997 CEP350Q5VT06 3117 aa16.53■□□□□ 0.24
SENP3-204ENST00000580997 CLEC4GQ6UXB4 293 aa16.53■□□□□ 0.24
SENP3-204ENST00000580997 BICDL1Q6ZP65 573 aa16.53■□□□□ 0.24
SENP3-204ENST00000580997 NPM2Q86SE8 214 aaKnown RBP16.53■□□□□ 0.24
SENP3-204ENST00000580997 ZNF526Q8TF50 670 aaPredicted RBP16.53■□□□□ 0.24
SENP3-204ENST00000580997 ZNF330Q9Y3S2 320 aaPredicted RBP16.53■□□□□ 0.24
SENP3-204ENST00000580997 SENP3-EIF4A1A0A087X0R7 540 aa16.52■□□□□ 0.24
SENP3-204ENST00000580997 NBPF26B4DH59 902 aa16.52■□□□□ 0.24
SENP3-204ENST00000580997 RGL2O15211 777 aa16.52■□□□□ 0.24
SENP3-204ENST00000580997 NBPF10Q6P3W6 841 aaKnown RBP16.52■□□□□ 0.24
SENP3-204ENST00000580997 DZIP3Q86Y13 1208 aaKnown RBP16.52■□□□□ 0.24
SENP3-204ENST00000580997 NBPF15Q8N660 670 aa16.52■□□□□ 0.24
SENP3-204ENST00000580997 PNISRQ8TF01 805 aaKnown RBP16.52■□□□□ 0.24
SENP3-204ENST00000580997 BRIP1Q9BX63 1249 aa16.52■□□□□ 0.24
SENP3-204ENST00000580997 MIS18AQ9NYP9 233 aa16.52■□□□□ 0.24
SENP3-204ENST00000580997 SCN7AQ01118 1682 aa16.52■□□□□ 0.23
SENP3-204ENST00000580997 CARMIL3Q8ND23 1372 aa16.51■□□□□ 0.23
SENP3-204ENST00000580997 H0YIN7 160 aa16.51■□□□□ 0.23
SENP3-204ENST00000580997 KIF3CO14782 793 aa16.51■□□□□ 0.23
SENP3-204ENST00000580997 DDX10Q13206 875 aaKnown RBP16.51■□□□□ 0.23
SENP3-204ENST00000580997 C9orf131Q5VYM1 1079 aa16.51■□□□□ 0.23
SENP3-204ENST00000580997 PRR5LQ6MZQ0 368 aa16.51■□□□□ 0.23
SENP3-204ENST00000580997 C2CD5Q86YS7 1000 aa16.51■□□□□ 0.23
SENP3-204ENST00000580997 SETDB2Q96T68 719 aa16.51■□□□□ 0.23
SENP3-204ENST00000580997 PDZRN3Q9UPQ7 1066 aa16.51■□□□□ 0.23
SENP3-204ENST00000580997 PDE6BP35913 854 aa16.5■□□□□ 0.23
SENP3-204ENST00000580997 PIP4K2AP48426 406 aaPredicted RBP16.5■□□□□ 0.23
SENP3-204ENST00000580997 TTLL6Q8N841 843 aa16.5■□□□□ 0.23
SENP3-204ENST00000580997 MAPK8IP3Q9UPT6 1336 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms