RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 WASHC2AQ641Q2 1341 aa14.85□□□□□ -0.03
TOP3A-210ENST00000580713 USP42Q9H9J4 1324 aaKnown RBP14.84□□□□□ -0.03
TOP3A-210ENST00000580713 KIF20BQ96Q89 1820 aa14.83□□□□□ -0.04
TOP3A-210ENST00000580713 SBF1O95248 1867 aa14.83□□□□□ -0.04
TOP3A-210ENST00000580713 POLRMTO00411 1230 aaKnown RBP14.83□□□□□ -0.04
TOP3A-210ENST00000580713 MKRN1Q9UHC7 482 aaKnown RBP14.83□□□□□ -0.04
TOP3A-210ENST00000580713 ZPR1O75312 459 aa14.82□□□□□ -0.04
TOP3A-210ENST00000580713 TM4SF1P30408 202 aa14.81□□□□□ -0.04
TOP3A-210ENST00000580713 PLEKHO1Q53GL0 409 aaPredicted RBP14.81□□□□□ -0.04
TOP3A-210ENST00000580713 CDCA8Q53HL2 280 aa14.81□□□□□ -0.04
TOP3A-210ENST00000580713 DPY19L2Q6NUT2 758 aa14.81□□□□□ -0.04
TOP3A-210ENST00000580713 ZNF530Q6P9A1 599 aaPredicted RBP14.81□□□□□ -0.04
TOP3A-210ENST00000580713 CARD14Q9BXL6 1004 aa14.81□□□□□ -0.04
TOP3A-210ENST00000580713 ZBTB12Q9Y330 459 aaPredicted RBP14.81□□□□□ -0.04
TOP3A-210ENST00000580713 MYH14Q7Z406 1995 aaKnown RBP14.8□□□□□ -0.04
TOP3A-210ENST00000580713 MKRN4PQ13434 485 aaPredicted RBP14.8□□□□□ -0.04
TOP3A-210ENST00000580713 EIF4A2Q14240 407 aaKnown RBP14.8□□□□□ -0.04
TOP3A-210ENST00000580713 USPL1Q5W0Q7 1092 aa14.8□□□□□ -0.04
TOP3A-210ENST00000580713 TTLL6Q8N841 843 aa14.8□□□□□ -0.04
TOP3A-210ENST00000580713 POLKQ9UBT6 870 aa14.8□□□□□ -0.04
TOP3A-210ENST00000580713 FOXN1O15353 648 aa14.79□□□□□ -0.04
TOP3A-210ENST00000580713 KDM6AO15550 1401 aaPredicted RBP14.79□□□□□ -0.04
TOP3A-210ENST00000580713 SLC34A2O95436 690 aa14.79□□□□□ -0.04
TOP3A-210ENST00000580713 COL5A3P25940 1745 aaPredicted RBP14.79□□□□□ -0.04
TOP3A-210ENST00000580713 MTHFSP49914 203 aa14.79□□□□□ -0.04
TOP3A-210ENST00000580713 ZNF831Q5JPB2 1677 aa14.79□□□□□ -0.04
TOP3A-210ENST00000580713 CREBZFQ9NS37 354 aa14.79□□□□□ -0.04
TOP3A-210ENST00000580713 POTECB2RU33 542 aa14.78□□□□□ -0.04
TOP3A-210ENST00000580713 TNNT2P45379 298 aaPredicted RBP14.78□□□□□ -0.04
TOP3A-210ENST00000580713 C1orf141Q5JVX7 400 aa14.78□□□□□ -0.04
TOP3A-210ENST00000580713 NFATC2IPQ8NCF5 419 aa14.78□□□□□ -0.04
TOP3A-210ENST00000580713 AIDAQ96BJ3 306 aa14.78□□□□□ -0.04
TOP3A-210ENST00000580713 CHADLQ6NUI6 762 aa14.77□□□□□ -0.05
TOP3A-210ENST00000580713 INTS5Q6P9B9 1019 aaKnown RBP14.77□□□□□ -0.05
TOP3A-210ENST00000580713 C2CD5Q86YS7 1000 aa14.77□□□□□ -0.05
TOP3A-210ENST00000580713 PRDM10Q9NQV6 1147 aa14.77□□□□□ -0.05
TOP3A-210ENST00000580713 H0YIN7 160 aa14.76□□□□□ -0.05
TOP3A-210ENST00000580713 NFKBIEO00221 500 aa14.76□□□□□ -0.05
TOP3A-210ENST00000580713 CTCFP49711 727 aaPredicted RBP14.76□□□□□ -0.05
TOP3A-210ENST00000580713 NFIXQ14938 502 aa14.76□□□□□ -0.05
TOP3A-210ENST00000580713 AMOTQ4VCS5 1084 aa14.76□□□□□ -0.05
TOP3A-210ENST00000580713 SERPINB2P05120 415 aa14.75□□□□□ -0.05
TOP3A-210ENST00000580713 ERFEQ4G0M1 354 aa14.75□□□□□ -0.05
TOP3A-210ENST00000580713 DNAJC10Q8IXB1 793 aa14.74□□□□□ -0.05
TOP3A-210ENST00000580713 ZNF622Q969S3 477 aaKnown RBP eCLIP14.74□□□□□ -0.05
TOP3A-210ENST00000580713 CNTNAP1P78357 1384 aa14.73□□□□□ -0.05
TOP3A-210ENST00000580713 TIAM2Q8IVF5 1701 aa14.72□□□□□ -0.05
TOP3A-210ENST00000580713 ANKRD26Q9UPS8 1709 aa14.72□□□□□ -0.05
TOP3A-210ENST00000580713 SOS1Q07889 1333 aaPredicted RBP14.72□□□□□ -0.05
TOP3A-210ENST00000580713 CCDC88AQ3V6T2 1871 aa14.72□□□□□ -0.05
TOP3A-210ENST00000580713 C21orf2O43822 256 aa14.72□□□□□ -0.05
TOP3A-210ENST00000580713 POTEIP0CG38 1075 aa14.72□□□□□ -0.05
TOP3A-210ENST00000580713 POTEJP0CG39 1038 aa14.72□□□□□ -0.05
TOP3A-210ENST00000580713 BICDL1Q6ZP65 573 aa14.72□□□□□ -0.05
TOP3A-210ENST00000580713 NARFQ9UHQ1 456 aa14.72□□□□□ -0.05
TOP3A-210ENST00000580713 DDNO94850 711 aaPredicted RBP14.71□□□□□ -0.05
TOP3A-210ENST00000580713 LBX1P52954 281 aa14.71□□□□□ -0.05
TOP3A-210ENST00000580713 FAM161AQ3B820 660 aa14.71□□□□□ -0.05
TOP3A-210ENST00000580713 TIMELESSQ9UNS1 1208 aa14.71□□□□□ -0.05
TOP3A-210ENST00000580713 VEGFBP49765 207 aa14.7□□□□□ -0.06
TOP3A-210ENST00000580713 POLR3GLQ9BT43 218 aa14.7□□□□□ -0.06
TOP3A-210ENST00000580713 COL15A1P39059 1388 aa14.7□□□□□ -0.06
TOP3A-210ENST00000580713 CYP19A1P11511 503 aaPredicted RBP14.69□□□□□ -0.06
TOP3A-210ENST00000580713 AEBP1Q8IUX7 1158 aa14.69□□□□□ -0.06
TOP3A-210ENST00000580713 TJP1Q07157 1748 aa14.69□□□□□ -0.06
TOP3A-210ENST00000580713 AFDNP55196 1824 aaKnown RBP14.69□□□□□ -0.06
TOP3A-210ENST00000580713 TMEM88BA6NKF7 163 aa14.68□□□□□ -0.06
TOP3A-210ENST00000580713 ABHD8Q96I13 439 aa14.68□□□□□ -0.06
TOP3A-210ENST00000580713 BCL2L12Q9HB09 334 aa14.68□□□□□ -0.06
TOP3A-210ENST00000580713 ZBTB1Q9Y2K1 713 aa14.68□□□□□ -0.06
TOP3A-210ENST00000580713 CARMIL3Q8ND23 1372 aa14.68□□□□□ -0.06
TOP3A-210ENST00000580713 IQCA1LA6NCM1 817 aa14.67□□□□□ -0.06
TOP3A-210ENST00000580713 CANXP27824 592 aaKnown RBP14.67□□□□□ -0.06
TOP3A-210ENST00000580713 PDE6BP35913 854 aa14.67□□□□□ -0.06
TOP3A-210ENST00000580713 SLC39A6Q13433 755 aa14.67□□□□□ -0.06
TOP3A-210ENST00000580713 EAPPQ56P03 285 aaPredicted RBP14.67□□□□□ -0.06
TOP3A-210ENST00000580713 LDHDQ86WU2 507 aa14.67□□□□□ -0.06
TOP3A-210ENST00000580713 TAOK3Q9H2K8 898 aa14.67□□□□□ -0.06
TOP3A-210ENST00000580713 WBP1LQ9NX94 342 aa14.67□□□□□ -0.06
TOP3A-210ENST00000580713 CLEC11AQ9Y240 323 aa14.67□□□□□ -0.06
TOP3A-210ENST00000580713 ADAMTS7Q9UKP4 1686 aa14.66□□□□□ -0.06
TOP3A-210ENST00000580713 NPHP1O15259 732 aa14.66□□□□□ -0.06
TOP3A-210ENST00000580713 SULT6B1Q6IMI4 303 aa14.66□□□□□ -0.06
TOP3A-210ENST00000580713 CCDC24Q8N4L8 307 aa14.66□□□□□ -0.06
TOP3A-210ENST00000580713 SLC52A2Q9HAB3 445 aa14.66□□□□□ -0.06
TOP3A-210ENST00000580713 PDZRN3Q9UPQ7 1066 aa14.66□□□□□ -0.06
TOP3A-210ENST00000580713 PASKQ96RG2 1323 aa14.66□□□□□ -0.06
TOP3A-210ENST00000580713 DLEC1Q9Y238 1755 aa14.65□□□□□ -0.06
TOP3A-210ENST00000580713 BRIP1Q9BX63 1249 aa14.65□□□□□ -0.06
TOP3A-210ENST00000580713 TAF1DQ9H5J8 278 aaPredicted RBP14.65□□□□□ -0.06
TOP3A-210ENST00000580713 NRXN2Q9P2S2 1712 aa14.64□□□□□ -0.07
TOP3A-210ENST00000580713 CCDC85CA6NKD9 419 aa14.64□□□□□ -0.07
TOP3A-210ENST00000580713 HSPA8P11142 646 aaKnown RBP14.64□□□□□ -0.07
TOP3A-210ENST00000580713 AKAP4Q5JQC9 854 aa14.64□□□□□ -0.07
TOP3A-210ENST00000580713 LGR6Q9HBX8 967 aa14.64□□□□□ -0.07
TOP3A-210ENST00000580713 LTBP3Q9NS15 1303 aa14.64□□□□□ -0.07
TOP3A-210ENST00000580713 A0A087WZG4 1122 aa14.63□□□□□ -0.07
TOP3A-210ENST00000580713 MLLT1Q03111 559 aaPredicted RBP14.63□□□□□ -0.07
TOP3A-210ENST00000580713 DEFB115Q30KQ5 88 aa14.63□□□□□ -0.07
TOP3A-210ENST00000580713 TBC1D9BQ66K14 1250 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms