RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 HSPA5P11021 654 aaKnown RBP26.55■■□□□ 1.84
LIMD2-209ENST00000580222 MTHFSP49914 203 aa26.55■■□□□ 1.84
LIMD2-209ENST00000580222 NFIXQ14938 502 aa26.55■■□□□ 1.84
LIMD2-209ENST00000580222 AEBP1Q8IUX7 1158 aa26.55■■□□□ 1.84
LIMD2-209ENST00000580222 ADAMTS7Q9UKP4 1686 aa26.54■■□□□ 1.84
LIMD2-209ENST00000580222 DNAJC10Q8IXB1 793 aa26.53■■□□□ 1.84
LIMD2-209ENST00000580222 BCL2L12Q9HB09 334 aa26.52■■□□□ 1.84
LIMD2-209ENST00000580222 SOS1Q07889 1333 aaPredicted RBP26.51■■□□□ 1.83
LIMD2-209ENST00000580222 ZPR1O75312 459 aa26.5■■□□□ 1.83
LIMD2-209ENST00000580222 TTLL6Q8N841 843 aa26.5■■□□□ 1.83
LIMD2-209ENST00000580222 MKRN1Q9UHC7 482 aaKnown RBP26.5■■□□□ 1.83
LIMD2-209ENST00000580222 TJP1Q07157 1748 aa26.5■■□□□ 1.83
LIMD2-209ENST00000580222 AMOTQ4VCS5 1084 aa26.49■■□□□ 1.83
LIMD2-209ENST00000580222 CARMIL3Q8ND23 1372 aa26.48■■□□□ 1.83
LIMD2-209ENST00000580222 SERPINB2P05120 415 aa26.48■■□□□ 1.83
LIMD2-209ENST00000580222 POTEIP0CG38 1075 aa26.48■■□□□ 1.83
LIMD2-209ENST00000580222 POTEJP0CG39 1038 aa26.48■■□□□ 1.83
LIMD2-209ENST00000580222 C2CD5Q86YS7 1000 aa26.48■■□□□ 1.83
LIMD2-209ENST00000580222 FOXN1O15353 648 aa26.47■■□□□ 1.83
LIMD2-209ENST00000580222 CYP19A1P11511 503 aaPredicted RBP26.47■■□□□ 1.83
LIMD2-209ENST00000580222 NARFQ9UHQ1 456 aa26.46■■□□□ 1.83
LIMD2-209ENST00000580222 C1orf141Q5JVX7 400 aa26.45■■□□□ 1.82
LIMD2-209ENST00000580222 CREBZFQ9NS37 354 aa26.44■■□□□ 1.82
LIMD2-209ENST00000580222 SLC39A6Q13433 755 aa26.43■■□□□ 1.82
LIMD2-209ENST00000580222 LGR6Q9HBX8 967 aa26.43■■□□□ 1.82
LIMD2-209ENST00000580222 ZBTB1Q9Y2K1 713 aa26.43■■□□□ 1.82
LIMD2-209ENST00000580222 ZNF219Q9P2Y4 722 aaPredicted RBP26.42■■□□□ 1.82
LIMD2-209ENST00000580222 H0YIN7 160 aa26.41■■□□□ 1.82
LIMD2-209ENST00000580222 CHADLQ6NUI6 762 aa26.41■■□□□ 1.82
LIMD2-209ENST00000580222 SULT6B1Q6IMI4 303 aa26.4■■□□□ 1.82
LIMD2-209ENST00000580222 DPY19L2Q6NUT2 758 aa26.4■■□□□ 1.82
LIMD2-209ENST00000580222 COL15A1P39059 1388 aa26.4■■□□□ 1.82
LIMD2-209ENST00000580222 NRXN2Q9P2S2 1712 aa26.39■■□□□ 1.82
LIMD2-209ENST00000580222 AFDNP55196 1824 aaKnown RBP26.39■■□□□ 1.82
LIMD2-209ENST00000580222 C21orf2O43822 256 aa26.39■■□□□ 1.82
LIMD2-209ENST00000580222 CCDC24Q8N4L8 307 aa26.39■■□□□ 1.82
LIMD2-209ENST00000580222 TIAM2Q8IVF5 1701 aa26.39■■□□□ 1.81
LIMD2-209ENST00000580222 DDNO94850 711 aaPredicted RBP26.38■■□□□ 1.81
LIMD2-209ENST00000580222 ERFEQ4G0M1 354 aa26.38■■□□□ 1.81
LIMD2-209ENST00000580222 BICDL1Q6ZP65 573 aa26.38■■□□□ 1.81
LIMD2-209ENST00000580222 SLC52A2Q9HAB3 445 aa26.38■■□□□ 1.81
LIMD2-209ENST00000580222 SLC34A2O95436 690 aa26.37■■□□□ 1.81
LIMD2-209ENST00000580222 ZNF622Q969S3 477 aaKnown RBP eCLIP26.36■■□□□ 1.81
LIMD2-209ENST00000580222 POLR3GLQ9BT43 218 aa26.36■■□□□ 1.81
LIMD2-209ENST00000580222 PRDM10Q9NQV6 1147 aa26.36■■□□□ 1.81
LIMD2-209ENST00000580222 CNTNAP1P78357 1384 aa26.35■■□□□ 1.81
LIMD2-209ENST00000580222 DLEC1Q9Y238 1755 aa26.34■■□□□ 1.81
LIMD2-209ENST00000580222 CANXP27824 592 aaKnown RBP26.33■■□□□ 1.81
LIMD2-209ENST00000580222 VEGFBP49765 207 aa26.33■■□□□ 1.81
LIMD2-209ENST00000580222 PASKQ96RG2 1323 aa26.33■■□□□ 1.81
LIMD2-209ENST00000580222 IL13P35225 146 aa26.32■■□□□ 1.8
LIMD2-209ENST00000580222 AKAP4Q5JQC9 854 aa26.32■■□□□ 1.8
LIMD2-209ENST00000580222 TBC1D9BQ66K14 1250 aa26.32■■□□□ 1.8
LIMD2-209ENST00000580222 RNMTO43148 476 aaKnown RBP26.31■■□□□ 1.8
LIMD2-209ENST00000580222 CCDC88AQ3V6T2 1871 aa26.31■■□□□ 1.8
LIMD2-209ENST00000580222 CTCFP49711 727 aaPredicted RBP26.29■■□□□ 1.8
LIMD2-209ENST00000580222 EIF5P55010 431 aaKnown RBP26.29■■□□□ 1.8
LIMD2-209ENST00000580222 PRR5LQ6MZQ0 368 aa26.29■■□□□ 1.8
LIMD2-209ENST00000580222 BRIP1Q9BX63 1249 aa26.29■■□□□ 1.8
LIMD2-209ENST00000580222 PANK3Q9H999 370 aa26.29■■□□□ 1.8
LIMD2-209ENST00000580222 LBX1P52954 281 aa26.28■■□□□ 1.8
LIMD2-209ENST00000580222 WBP1LQ9NX94 342 aa26.28■■□□□ 1.8
LIMD2-209ENST00000580222 ITGBL1O95965 494 aaPredicted RBP26.27■■□□□ 1.8
LIMD2-209ENST00000580222 TAOK3Q9H2K8 898 aa26.27■■□□□ 1.8
LIMD2-209ENST00000580222 LTBP3Q9NS15 1303 aa26.27■■□□□ 1.8
LIMD2-209ENST00000580222 SCN11AQ9UI33 1791 aa26.26■■□□□ 1.79
LIMD2-209ENST00000580222 TAF1DQ9H5J8 278 aaPredicted RBP26.26■■□□□ 1.79
LIMD2-209ENST00000580222 MRC1P22897 1456 aa26.25■■□□□ 1.79
LIMD2-209ENST00000580222 PDE6BP35913 854 aa26.25■■□□□ 1.79
LIMD2-209ENST00000580222 ANKRD31Q8N7Z5 1873 aa26.24■■□□□ 1.79
LIMD2-209ENST00000580222 MORC1Q86VD1 984 aa26.24■■□□□ 1.79
LIMD2-209ENST00000580222 LDHDQ86WU2 507 aa26.24■■□□□ 1.79
LIMD2-209ENST00000580222 VSIG10Q8N0Z9 540 aa26.24■■□□□ 1.79
LIMD2-209ENST00000580222 TBC1D2BQ9UPU7 963 aa26.24■■□□□ 1.79
LIMD2-209ENST00000580222 KIF7Q2M1P5 1343 aa26.23■■□□□ 1.79
LIMD2-209ENST00000580222 AIDAQ96BJ3 306 aa26.23■■□□□ 1.79
LIMD2-209ENST00000580222 TMEM88BA6NKF7 163 aa26.22■■□□□ 1.79
LIMD2-209ENST00000580222 FAM161AQ3B820 660 aa26.22■■□□□ 1.79
LIMD2-209ENST00000580222 PRPF40BQ6NWY9 871 aaKnown RBP26.22■■□□□ 1.79
LIMD2-209ENST00000580222 ABHD8Q96I13 439 aa26.22■■□□□ 1.79
LIMD2-209ENST00000580222 L3MBTL3Q96JM7 780 aaPredicted RBP26.22■■□□□ 1.79
LIMD2-209ENST00000580222 COL11A2P13942 1736 aaPredicted RBP26.22■■□□□ 1.79
LIMD2-209ENST00000580222 FER1L6Q2WGJ9 1857 aa26.21■■□□□ 1.79
LIMD2-209ENST00000580222 HSPA8P11142 646 aaKnown RBP26.21■■□□□ 1.79
LIMD2-209ENST00000580222 MTHFSDQ2M296 383 aaKnown RBP26.21■■□□□ 1.79
LIMD2-209ENST00000580222 HMOX1P09601 288 aa26.2■■□□□ 1.78
LIMD2-209ENST00000580222 SRGNP10124 158 aa26.2■■□□□ 1.78
LIMD2-209ENST00000580222 C7orf43Q8WVR3 580 aa26.2■■□□□ 1.78
LIMD2-209ENST00000580222 PDZRN3Q9UPQ7 1066 aa26.2■■□□□ 1.78
LIMD2-209ENST00000580222 ZNF541Q9H0D2 1346 aa26.18■■□□□ 1.78
LIMD2-209ENST00000580222 A0A087WZG4 1122 aa26.18■■□□□ 1.78
LIMD2-209ENST00000580222 IQCA1LA6NCM1 817 aa26.18■■□□□ 1.78
LIMD2-209ENST00000580222 STARD3NLO95772 234 aa26.18■■□□□ 1.78
LIMD2-209ENST00000580222 STYK1Q6J9G0 422 aa26.18■■□□□ 1.78
LIMD2-209ENST00000580222 DICER1Q9UPY3 1922 aaKnown RBP26.18■■□□□ 1.78
LIMD2-209ENST00000580222 EAPPQ56P03 285 aaPredicted RBP26.17■■□□□ 1.78
LIMD2-209ENST00000580222 CNKSR1Q969H4 720 aa26.17■■□□□ 1.78
LIMD2-209ENST00000580222 ZNF496Q96IT1 587 aaPredicted RBP26.17■■□□□ 1.78
LIMD2-209ENST00000580222 ZNF330Q9Y3S2 320 aaPredicted RBP26.17■■□□□ 1.78
LIMD2-209ENST00000580222 SLX4Q8IY92 1834 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms