RNA–Protein interactions for RNA: ENST00000579057.5

LINC00271-204, long intergenic non-protein coding RNA 271, humanhuman

TSL 2

Gene LINC00271, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-204ENST00000579057 CCDC87Q9NVE4 849 aa12.58□□□□□ -0.4
LINC00271-204ENST00000579057 NRXN2Q9P2S2 1712 aa12.58□□□□□ -0.4
LINC00271-204ENST00000579057 BCS1LQ9Y276 419 aa12.58□□□□□ -0.4
LINC00271-204ENST00000579057 SBF1O95248 1867 aa12.57□□□□□ -0.4
LINC00271-204ENST00000579057 SIPA1L3O60292 1781 aaPredicted RBP12.57□□□□□ -0.4
LINC00271-204ENST00000579057 TM4SF1P30408 202 aa12.57□□□□□ -0.4
LINC00271-204ENST00000579057 SLC39A6Q13433 755 aa12.57□□□□□ -0.4
LINC00271-204ENST00000579057 MTHFSDQ2M296 383 aaKnown RBP12.57□□□□□ -0.4
LINC00271-204ENST00000579057 PARP3Q9Y6F1 533 aa12.57□□□□□ -0.4
LINC00271-204ENST00000579057 SOS1Q07889 1333 aaPredicted RBP12.57□□□□□ -0.4
LINC00271-204ENST00000579057 POLRMTO00411 1230 aaKnown RBP12.56□□□□□ -0.4
LINC00271-204ENST00000579057 CYP19A1P11511 503 aaPredicted RBP12.56□□□□□ -0.4
LINC00271-204ENST00000579057 HSPA6P17066 643 aa12.55□□□□□ -0.4
LINC00271-204ENST00000579057 CC2D1BQ5T0F9 858 aaKnown RBP12.55□□□□□ -0.4
LINC00271-204ENST00000579057 BCL2L12Q9HB09 334 aa12.55□□□□□ -0.4
LINC00271-204ENST00000579057 DLEC1Q9Y238 1755 aa12.55□□□□□ -0.4
LINC00271-204ENST00000579057 NPC1L1Q9UHC9 1359 aa12.55□□□□□ -0.4
LINC00271-204ENST00000579057 PCNTO95613 3336 aa12.54□□□□□ -0.4
LINC00271-204ENST00000579057 DIAPH1O60610 1272 aaKnown RBP12.54□□□□□ -0.4
LINC00271-204ENST00000579057 FCHSD2O94868 740 aa12.54□□□□□ -0.4
LINC00271-204ENST00000579057 CHRNA5P30532 468 aa12.54□□□□□ -0.4
LINC00271-204ENST00000579057 ARHGAP27Q6ZUM4 889 aa12.54□□□□□ -0.4
LINC00271-204ENST00000579057 USPL1Q5W0Q7 1092 aa12.53□□□□□ -0.4
LINC00271-204ENST00000579057 PIM2Q9P1W9 311 aa12.53□□□□□ -0.4
LINC00271-204ENST00000579057 ZBTB1Q9Y2K1 713 aa12.53□□□□□ -0.4
LINC00271-204ENST00000579057 COL15A1P39059 1388 aa12.53□□□□□ -0.4
LINC00271-204ENST00000579057 NFIXQ14938 502 aa12.52□□□□□ -0.41
LINC00271-204ENST00000579057 VSIG10Q8N0Z9 540 aa12.52□□□□□ -0.41
LINC00271-204ENST00000579057 NMRK2Q9NPI5 230 aa12.52□□□□□ -0.41
LINC00271-204ENST00000579057 NARFQ9UHQ1 456 aa12.52□□□□□ -0.41
LINC00271-204ENST00000579057 ANKRD31Q8N7Z5 1873 aa12.51□□□□□ -0.41
LINC00271-204ENST00000579057 DALRD3Q5D0E6 543 aaKnown RBP12.51□□□□□ -0.41
LINC00271-204ENST00000579057 C9orf131Q5VYM1 1079 aa12.51□□□□□ -0.41
LINC00271-204ENST00000579057 IL17REQ8NFR9 667 aa12.51□□□□□ -0.41
LINC00271-204ENST00000579057 SCN7AQ01118 1682 aa12.51□□□□□ -0.41
LINC00271-204ENST00000579057 ZPR1O75312 459 aa12.5□□□□□ -0.41
LINC00271-204ENST00000579057 CARMIL3Q8ND23 1372 aa12.5□□□□□ -0.41
LINC00271-204ENST00000579057 CCDC88AQ3V6T2 1871 aa12.49□□□□□ -0.41
LINC00271-204ENST00000579057 CEMIPQ8WUJ3 1361 aa12.49□□□□□ -0.41
LINC00271-204ENST00000579057 EIF5P55010 431 aaKnown RBP12.49□□□□□ -0.41
LINC00271-204ENST00000579057 ZNF496Q96IT1 587 aaPredicted RBP12.49□□□□□ -0.41
LINC00271-204ENST00000579057 COL11A2P13942 1736 aaPredicted RBP12.48□□□□□ -0.41
LINC00271-204ENST00000579057 TOMM70O94826 608 aa12.48□□□□□ -0.41
LINC00271-204ENST00000579057 PRELPP51888 382 aa12.48□□□□□ -0.41
LINC00271-204ENST00000579057 HEG1Q9ULI3 1381 aa12.47□□□□□ -0.41
LINC00271-204ENST00000579057 SERPINB2P05120 415 aa12.47□□□□□ -0.41
LINC00271-204ENST00000579057 CANXP27824 592 aaKnown RBP12.47□□□□□ -0.41
LINC00271-204ENST00000579057 DNAJC5GQ8N7S2 189 aa12.47□□□□□ -0.41
LINC00271-204ENST00000579057 PHACTR3Q96KR7 559 aa12.47□□□□□ -0.41
LINC00271-204ENST00000579057 WDR90Q96KV7 1748 aa12.47□□□□□ -0.41
LINC00271-204ENST00000579057 TNRC6CQ9HCJ0 1690 aaKnown RBP12.47□□□□□ -0.41
LINC00271-204ENST00000579057 GNAT3A8MTJ3 354 aa12.46□□□□□ -0.41
LINC00271-204ENST00000579057 U2SURPO15042 1029 aaKnown RBP12.46□□□□□ -0.41
LINC00271-204ENST00000579057 CNGB1Q14028 1251 aaPredicted RBP12.46□□□□□ -0.41
LINC00271-204ENST00000579057 ZNF790Q6PG37 636 aa12.46□□□□□ -0.41
LINC00271-204ENST00000579057 RSPH6AQ9H0K4 717 aa12.46□□□□□ -0.41
LINC00271-204ENST00000579057 RNF181Q9P0P0 153 aa12.46□□□□□ -0.41
LINC00271-204ENST00000579057 BCORQ6W2J9 1755 aa12.46□□□□□ -0.42
LINC00271-204ENST00000579057 TIAM2Q8IVF5 1701 aa12.45□□□□□ -0.42
LINC00271-204ENST00000579057 KCNQ3O43525 872 aa12.45□□□□□ -0.42
LINC00271-204ENST00000579057 ABCB7O75027 752 aa12.45□□□□□ -0.42
LINC00271-204ENST00000579057 RASSF7Q02833 373 aa12.45□□□□□ -0.42
LINC00271-204ENST00000579057 GAS2L2Q8NHY3 880 aa12.45□□□□□ -0.42
LINC00271-204ENST00000579057 FER1L6Q2WGJ9 1857 aa12.44□□□□□ -0.42
LINC00271-204ENST00000579057 STARD3NLO95772 234 aa12.44□□□□□ -0.42
LINC00271-204ENST00000579057 APLP1P51693 650 aa12.44□□□□□ -0.42
LINC00271-204ENST00000579057 IFFO2Q5TF58 517 aa12.44□□□□□ -0.42
LINC00271-204ENST00000579057 TBC1D9BQ66K14 1250 aa12.44□□□□□ -0.42
LINC00271-204ENST00000579057 TTC5Q8N0Z6 440 aa12.44□□□□□ -0.42
LINC00271-204ENST00000579057 RBM46Q8TBY0 533 aaKnown RBP12.44□□□□□ -0.42
LINC00271-204ENST00000579057 DICER1Q9UPY3 1922 aaKnown RBP12.44□□□□□ -0.42
LINC00271-204ENST00000579057 NFKBIEO00221 500 aa12.43□□□□□ -0.42
LINC00271-204ENST00000579057 A1BGP04217 495 aa12.43□□□□□ -0.42
LINC00271-204ENST00000579057 PRKAR2BP31323 418 aa12.43□□□□□ -0.42
LINC00271-204ENST00000579057 TEFQ10587 303 aa12.43□□□□□ -0.42
LINC00271-204ENST00000579057 C2CD5Q86YS7 1000 aa12.43□□□□□ -0.42
LINC00271-204ENST00000579057 SLX4Q8IY92 1834 aa12.42□□□□□ -0.42
LINC00271-204ENST00000579057 A0A087WZG4 1122 aa12.42□□□□□ -0.42
LINC00271-204ENST00000579057 CAMTA2O94983 1202 aa12.42□□□□□ -0.42
LINC00271-204ENST00000579057 IL6STP40189 918 aaPredicted RBP12.42□□□□□ -0.42
LINC00271-204ENST00000579057 PRR5LQ6MZQ0 368 aa12.42□□□□□ -0.42
LINC00271-204ENST00000579057 BICDL1Q6ZP65 573 aa12.42□□□□□ -0.42
LINC00271-204ENST00000579057 TTLL6Q8N841 843 aa12.42□□□□□ -0.42
LINC00271-204ENST00000579057 TBC1D2BQ9UPU7 963 aa12.42□□□□□ -0.42
LINC00271-204ENST00000579057 CACNA1SQ13698 1873 aa12.42□□□□□ -0.42
LINC00271-204ENST00000579057 KDM2BQ8NHM5 1336 aa12.41□□□□□ -0.42
LINC00271-204ENST00000579057 ZC3H4Q9UPT8 1303 aaKnown RBP12.41□□□□□ -0.42
LINC00271-204ENST00000579057 ARFGEF2Q9Y6D5 1785 aa12.41□□□□□ -0.42
LINC00271-204ENST00000579057 PRAMEF22A3QJZ6 481 aa12.41□□□□□ -0.42
LINC00271-204ENST00000579057 PPP2R1AP30153 589 aa12.41□□□□□ -0.42
LINC00271-204ENST00000579057 HTRA3P83110 453 aa12.41□□□□□ -0.42
LINC00271-204ENST00000579057 CCDC24Q8N4L8 307 aa12.41□□□□□ -0.42
LINC00271-204ENST00000579057 FMNL2Q96PY5 1086 aa12.41□□□□□ -0.42
LINC00271-204ENST00000579057 TEX13AQ9BXU3 409 aaPredicted RBP12.41□□□□□ -0.42
LINC00271-204ENST00000579057 RRAGCQ9HB90 399 aa12.41□□□□□ -0.42
LINC00271-204ENST00000579057 H0YIN7 160 aa12.4□□□□□ -0.42
LINC00271-204ENST00000579057 LMNB1P20700 586 aa12.4□□□□□ -0.42
LINC00271-204ENST00000579057 FSTL1Q12841 308 aa12.4□□□□□ -0.42
LINC00271-204ENST00000579057 BRIP1Q9BX63 1249 aa12.4□□□□□ -0.42
LINC00271-204ENST00000579057 USP16Q9Y5T5 823 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms