RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 STARD3NLO95772 234 aa15.41■□□□□ 0.06
SSH2-208ENST00000579040 FKBP8Q14318 412 aa15.41■□□□□ 0.06
SSH2-208ENST00000579040 TEX13AQ9BXU3 409 aaPredicted RBP15.41■□□□□ 0.06
SSH2-208ENST00000579040 NARFQ9UHQ1 456 aa15.41■□□□□ 0.06
SSH2-208ENST00000579040 ZBTB1Q9Y2K1 713 aa15.41■□□□□ 0.06
SSH2-208ENST00000579040 DLG5Q8TDM6 1919 aa15.41■□□□□ 0.06
SSH2-208ENST00000579040 ADCY9O60503 1353 aa15.4■□□□□ 0.06
SSH2-208ENST00000579040 ZNF496Q96IT1 587 aaPredicted RBP15.4■□□□□ 0.06
SSH2-208ENST00000579040 GOLGB1Q14789 3259 aaKnown RBP15.39■□□□□ 0.05
SSH2-208ENST00000579040 SCN7AQ01118 1682 aa15.39■□□□□ 0.05
SSH2-208ENST00000579040 TM4SF1P30408 202 aa15.39■□□□□ 0.05
SSH2-208ENST00000579040 DDR1Q08345 913 aa15.39■□□□□ 0.05
SSH2-208ENST00000579040 USPL1Q5W0Q7 1092 aa15.39■□□□□ 0.05
SSH2-208ENST00000579040 FMNL2Q96PY5 1086 aa15.39■□□□□ 0.05
SSH2-208ENST00000579040 ATP10DQ9P241 1426 aa15.38■□□□□ 0.05
SSH2-208ENST00000579040 A0A087WZG4 1122 aa15.38■□□□□ 0.05
SSH2-208ENST00000579040 A0A0G2JLW4 131 aa15.38■□□□□ 0.05
SSH2-208ENST00000579040 POLRMTO00411 1230 aaKnown RBP15.38■□□□□ 0.05
SSH2-208ENST00000579040 HTATSF1O43719 755 aaKnown RBP15.38■□□□□ 0.05
SSH2-208ENST00000579040 DPEP1P16444 411 aa15.38■□□□□ 0.05
SSH2-208ENST00000579040 RTF1Q92541 710 aaKnown RBP15.38■□□□□ 0.05
SSH2-208ENST00000579040 WWC3Q9ULE0 1092 aa15.38■□□□□ 0.05
SSH2-208ENST00000579040 DLEC1Q9Y238 1755 aa15.37■□□□□ 0.05
SSH2-208ENST00000579040 BTBD11A6QL63 1104 aa15.37■□□□□ 0.05
SSH2-208ENST00000579040 GIGYF1O75420 1035 aaPredicted RBP15.37■□□□□ 0.05
SSH2-208ENST00000579040 EIF5P55010 431 aaKnown RBP15.37■□□□□ 0.05
SSH2-208ENST00000579040 NEFMP07197 916 aa15.36■□□□□ 0.05
SSH2-208ENST00000579040 CANXP27824 592 aaKnown RBP15.36■□□□□ 0.05
SSH2-208ENST00000579040 BCS1LQ9Y276 419 aa15.36■□□□□ 0.05
SSH2-208ENST00000579040 BCORQ6W2J9 1755 aa15.35■□□□□ 0.05
SSH2-208ENST00000579040 C1QTNF8P60827 252 aa15.35■□□□□ 0.05
SSH2-208ENST00000579040 NFIXQ14938 502 aa15.35■□□□□ 0.05
SSH2-208ENST00000579040 KCNA3P22001 575 aa15.34■□□□□ 0.05
SSH2-208ENST00000579040 IL6STP40189 918 aaPredicted RBP15.34■□□□□ 0.05
SSH2-208ENST00000579040 MCM10Q7L590 875 aa15.34■□□□□ 0.05
SSH2-208ENST00000579040 BCL2L12Q9HB09 334 aa15.34■□□□□ 0.05
SSH2-208ENST00000579040 PIM2Q9P1W9 311 aa15.34■□□□□ 0.05
SSH2-208ENST00000579040 LAMB4A4D0S4 1761 aa15.34■□□□□ 0.05
SSH2-208ENST00000579040 KDM3BQ7LBC6 1761 aa15.33■□□□□ 0.04
SSH2-208ENST00000579040 KCNQ3O43525 872 aa15.32■□□□□ 0.04
SSH2-208ENST00000579040 RALBP1Q15311 655 aa15.32■□□□□ 0.04
SSH2-208ENST00000579040 NPM2Q86SE8 214 aaKnown RBP15.32■□□□□ 0.04
SSH2-208ENST00000579040 PNNQ9H307 717 aaKnown RBP15.32■□□□□ 0.04
SSH2-208ENST00000579040 GPBP1L1Q9HC44 474 aaPredicted RBP15.32■□□□□ 0.04
SSH2-208ENST00000579040 SBF1O95248 1867 aa15.31■□□□□ 0.04
SSH2-208ENST00000579040 ANKRD31Q8N7Z5 1873 aa15.31■□□□□ 0.04
SSH2-208ENST00000579040 SERPINB2P05120 415 aa15.31■□□□□ 0.04
SSH2-208ENST00000579040 SNRPA1P09661 255 aaKnown RBP15.31■□□□□ 0.04
SSH2-208ENST00000579040 TAF7Q15545 349 aaPredicted RBP15.31■□□□□ 0.04
SSH2-208ENST00000579040 DALRD3Q5D0E6 543 aaKnown RBP15.31■□□□□ 0.04
SSH2-208ENST00000579040 A1BGP04217 495 aa15.3■□□□□ 0.04
SSH2-208ENST00000579040 DCTN1Q14203 1278 aa15.3■□□□□ 0.04
SSH2-208ENST00000579040 ARHGAP27Q6ZUM4 889 aa15.3■□□□□ 0.04
SSH2-208ENST00000579040 PLEKHF1Q96S99 279 aa15.3■□□□□ 0.04
SSH2-208ENST00000579040 ZNF330Q9Y3S2 320 aaPredicted RBP15.3■□□□□ 0.04
SSH2-208ENST00000579040 CARMIL3Q8ND23 1372 aa15.29■□□□□ 0.04
SSH2-208ENST00000579040 CHRNA5P30532 468 aa15.29■□□□□ 0.04
SSH2-208ENST00000579040 NFE2L2Q16236 605 aa15.29■□□□□ 0.04
SSH2-208ENST00000579040 USP16Q9Y5T5 823 aa15.29■□□□□ 0.04
SSH2-208ENST00000579040 MAPK8IP3Q9UPT6 1336 aa15.28■□□□□ 0.04
SSH2-208ENST00000579040 CAMTA2O94983 1202 aa15.28■□□□□ 0.04
SSH2-208ENST00000579040 TBC1D9BQ66K14 1250 aa15.28■□□□□ 0.04
SSH2-208ENST00000579040 PNISRQ8TF01 805 aaKnown RBP15.28■□□□□ 0.04
SSH2-208ENST00000579040 PDZRN3Q9UPQ7 1066 aa15.28■□□□□ 0.04
SSH2-208ENST00000579040 TBC1D2BQ9UPU7 963 aa15.28■□□□□ 0.04
SSH2-208ENST00000579040 BICDL1Q6ZP65 573 aa15.27■□□□□ 0.04
SSH2-208ENST00000579040 DZIP3Q86Y13 1208 aaKnown RBP15.27■□□□□ 0.04
SSH2-208ENST00000579040 SENP3-EIF4A1A0A087X0R7 540 aa15.26■□□□□ 0.03
SSH2-208ENST00000579040 RGL2O15211 777 aa15.26■□□□□ 0.03
SSH2-208ENST00000579040 CLEC4GQ6UXB4 293 aa15.26■□□□□ 0.03
SSH2-208ENST00000579040 ZNF526Q8TF50 670 aaPredicted RBP15.26■□□□□ 0.03
SSH2-208ENST00000579040 COL11A2P13942 1736 aaPredicted RBP15.26■□□□□ 0.03
SSH2-208ENST00000579040 CCDC88AQ3V6T2 1871 aa15.25■□□□□ 0.03
SSH2-208ENST00000579040 MYBBP1AQ9BQG0 1328 aaKnown RBP15.25■□□□□ 0.03
SSH2-208ENST00000579040 PRAMEF22A3QJZ6 481 aa15.25■□□□□ 0.03
SSH2-208ENST00000579040 H0YIN7 160 aa15.25■□□□□ 0.03
SSH2-208ENST00000579040 DDX10Q13206 875 aaKnown RBP15.25■□□□□ 0.03
SSH2-208ENST00000579040 C2CD5Q86YS7 1000 aa15.25■□□□□ 0.03
SSH2-208ENST00000579040 SETDB2Q96T68 719 aa15.25■□□□□ 0.03
SSH2-208ENST00000579040 ARFGEF2Q9Y6D5 1785 aa15.24■□□□□ 0.03
SSH2-208ENST00000579040 PDE6BP35913 854 aa15.24■□□□□ 0.03
SSH2-208ENST00000579040 C9orf131Q5VYM1 1079 aa15.24■□□□□ 0.03
SSH2-208ENST00000579040 PRR5LQ6MZQ0 368 aa15.24■□□□□ 0.03
SSH2-208ENST00000579040 TTLL6Q8N841 843 aa15.24■□□□□ 0.03
SSH2-208ENST00000579040 BRIP1Q9BX63 1249 aa15.24■□□□□ 0.03
SSH2-208ENST00000579040 ZNF652Q9Y2D9 606 aa15.24■□□□□ 0.03
SSH2-208ENST00000579040 CACNA1SQ13698 1873 aa15.23■□□□□ 0.03
SSH2-208ENST00000579040 NUP98P52948 1817 aa15.23■□□□□ 0.03
SSH2-208ENST00000579040 NBPF26B4DH59 902 aa15.23■□□□□ 0.03
SSH2-208ENST00000579040 PIP4K2AP48426 406 aaPredicted RBP15.23■□□□□ 0.03
SSH2-208ENST00000579040 NBPF10Q6P3W6 841 aaKnown RBP15.23■□□□□ 0.03
SSH2-208ENST00000579040 NBPF15Q8N660 670 aa15.23■□□□□ 0.03
SSH2-208ENST00000579040 CNBD1Q8NA66 436 aa15.23■□□□□ 0.03
SSH2-208ENST00000579040 MIS18AQ9NYP9 233 aa15.22■□□□□ 0.03
SSH2-208ENST00000579040 FER1L6Q2WGJ9 1857 aa15.22■□□□□ 0.03
SSH2-208ENST00000579040 TNRC6CQ9HCJ0 1690 aaKnown RBP15.22■□□□□ 0.03
SSH2-208ENST00000579040 DICER1Q9UPY3 1922 aaKnown RBP15.21■□□□□ 0.03
SSH2-208ENST00000579040 ZC3H4Q9UPT8 1303 aaKnown RBP15.21■□□□□ 0.03
SSH2-208ENST00000579040 KIF3CO14782 793 aa15.21■□□□□ 0.03
SSH2-208ENST00000579040 NPHP1O15259 732 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms