RNA–Protein interactions for RNA: ENST00000578916.2

PTPRM-210, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-210ENST00000578916 DNAJC10Q8IXB1 793 aa12.53□□□□□ -0.4
PTPRM-210ENST00000578916 MYH14Q7Z406 1995 aaKnown RBP12.52□□□□□ -0.4
PTPRM-210ENST00000578916 NFIXQ14938 502 aa12.52□□□□□ -0.41
PTPRM-210ENST00000578916 DPY19L2Q6NUT2 758 aa12.52□□□□□ -0.41
PTPRM-210ENST00000578916 C2CD5Q86YS7 1000 aa12.52□□□□□ -0.41
PTPRM-210ENST00000578916 SOS1Q07889 1333 aaPredicted RBP12.52□□□□□ -0.41
PTPRM-210ENST00000578916 H0YIN7 160 aa12.51□□□□□ -0.41
PTPRM-210ENST00000578916 SERPINB2P05120 415 aa12.51□□□□□ -0.41
PTPRM-210ENST00000578916 AEBP1Q8IUX7 1158 aa12.51□□□□□ -0.41
PTPRM-210ENST00000578916 NARFQ9UHQ1 456 aa12.51□□□□□ -0.41
PTPRM-210ENST00000578916 SULT6B1Q6IMI4 303 aa12.5□□□□□ -0.41
PTPRM-210ENST00000578916 SBF1O95248 1867 aa12.5□□□□□ -0.41
PTPRM-210ENST00000578916 POTECB2RU33 542 aa12.49□□□□□ -0.41
PTPRM-210ENST00000578916 NFKBIEO00221 500 aa12.49□□□□□ -0.41
PTPRM-210ENST00000578916 CYP19A1P11511 503 aaPredicted RBP12.49□□□□□ -0.41
PTPRM-210ENST00000578916 CREBZFQ9NS37 354 aa12.49□□□□□ -0.41
PTPRM-210ENST00000578916 MKRN1Q9UHC7 482 aaKnown RBP12.49□□□□□ -0.41
PTPRM-210ENST00000578916 COL15A1P39059 1388 aa12.48□□□□□ -0.41
PTPRM-210ENST00000578916 ERFEQ4G0M1 354 aa12.48□□□□□ -0.41
PTPRM-210ENST00000578916 AKAP4Q5JQC9 854 aa12.48□□□□□ -0.41
PTPRM-210ENST00000578916 CHADLQ6NUI6 762 aa12.48□□□□□ -0.41
PTPRM-210ENST00000578916 BICDL1Q6ZP65 573 aa12.48□□□□□ -0.41
PTPRM-210ENST00000578916 ZNF622Q969S3 477 aaKnown RBP eCLIP12.48□□□□□ -0.41
PTPRM-210ENST00000578916 SLC52A2Q9HAB3 445 aa12.48□□□□□ -0.41
PTPRM-210ENST00000578916 ZBTB1Q9Y2K1 713 aa12.48□□□□□ -0.41
PTPRM-210ENST00000578916 TJP1Q07157 1748 aa12.48□□□□□ -0.41
PTPRM-210ENST00000578916 SLC39A6Q13433 755 aa12.47□□□□□ -0.41
PTPRM-210ENST00000578916 BCL2L12Q9HB09 334 aa12.47□□□□□ -0.41
PTPRM-210ENST00000578916 ZNF219Q9P2Y4 722 aaPredicted RBP12.47□□□□□ -0.41
PTPRM-210ENST00000578916 C21orf2O43822 256 aa12.46□□□□□ -0.41
PTPRM-210ENST00000578916 MORC1Q86VD1 984 aa12.46□□□□□ -0.41
PTPRM-210ENST00000578916 LGR6Q9HBX8 967 aa12.46□□□□□ -0.41
PTPRM-210ENST00000578916 PDZRN3Q9UPQ7 1066 aa12.46□□□□□ -0.41
PTPRM-210ENST00000578916 CARMIL3Q8ND23 1372 aa12.45□□□□□ -0.42
PTPRM-210ENST00000578916 ADAMTS7Q9UKP4 1686 aa12.45□□□□□ -0.42
PTPRM-210ENST00000578916 FOXN1O15353 648 aa12.45□□□□□ -0.42
PTPRM-210ENST00000578916 RNMTO43148 476 aaKnown RBP12.45□□□□□ -0.42
PTPRM-210ENST00000578916 CANXP27824 592 aaKnown RBP12.45□□□□□ -0.42
PTPRM-210ENST00000578916 PDE6BP35913 854 aa12.45□□□□□ -0.42
PTPRM-210ENST00000578916 AIDAQ96BJ3 306 aa12.45□□□□□ -0.42
PTPRM-210ENST00000578916 PANK3Q9H999 370 aa12.45□□□□□ -0.42
PTPRM-210ENST00000578916 PRDM10Q9NQV6 1147 aa12.45□□□□□ -0.42
PTPRM-210ENST00000578916 A0A087WZG4 1122 aa12.44□□□□□ -0.42
PTPRM-210ENST00000578916 DDNO94850 711 aaPredicted RBP12.44□□□□□ -0.42
PTPRM-210ENST00000578916 VSIG10Q8N0Z9 540 aa12.44□□□□□ -0.42
PTPRM-210ENST00000578916 BRIP1Q9BX63 1249 aa12.44□□□□□ -0.42
PTPRM-210ENST00000578916 TAOK3Q9H2K8 898 aa12.44□□□□□ -0.42
PTPRM-210ENST00000578916 TIAM2Q8IVF5 1701 aa12.43□□□□□ -0.42
PTPRM-210ENST00000578916 STARD3NLO95772 234 aa12.43□□□□□ -0.42
PTPRM-210ENST00000578916 POTEIP0CG38 1075 aa12.43□□□□□ -0.42
PTPRM-210ENST00000578916 POTEJP0CG39 1038 aa12.43□□□□□ -0.42
PTPRM-210ENST00000578916 IL13P35225 146 aa12.43□□□□□ -0.42
PTPRM-210ENST00000578916 CTCFP49711 727 aaPredicted RBP12.43□□□□□ -0.42
PTPRM-210ENST00000578916 CNTNAP1P78357 1384 aa12.43□□□□□ -0.42
PTPRM-210ENST00000578916 NRXN2Q9P2S2 1712 aa12.42□□□□□ -0.42
PTPRM-210ENST00000578916 AFDNP55196 1824 aaKnown RBP12.42□□□□□ -0.42
PTPRM-210ENST00000578916 IQCA1LA6NCM1 817 aa12.42□□□□□ -0.42
PTPRM-210ENST00000578916 EIF5P55010 431 aaKnown RBP12.42□□□□□ -0.42
PTPRM-210ENST00000578916 TBC1D9BQ66K14 1250 aa12.42□□□□□ -0.42
PTPRM-210ENST00000578916 CCDC24Q8N4L8 307 aa12.42□□□□□ -0.42
PTPRM-210ENST00000578916 LTBP3Q9NS15 1303 aa12.41□□□□□ -0.42
PTPRM-210ENST00000578916 DLEC1Q9Y238 1755 aa12.41□□□□□ -0.42
PTPRM-210ENST00000578916 NPHP1O15259 732 aa12.41□□□□□ -0.42
PTPRM-210ENST00000578916 PRR5LQ6MZQ0 368 aa12.41□□□□□ -0.42
PTPRM-210ENST00000578916 LDHDQ86WU2 507 aa12.41□□□□□ -0.42
PTPRM-210ENST00000578916 TTC5Q8N0Z6 440 aa12.41□□□□□ -0.42
PTPRM-210ENST00000578916 CNKSR1Q969H4 720 aa12.41□□□□□ -0.42
PTPRM-210ENST00000578916 TMEM88BA6NKF7 163 aa12.4□□□□□ -0.42
PTPRM-210ENST00000578916 VEGFBP49765 207 aa12.4□□□□□ -0.42
PTPRM-210ENST00000578916 SOGA3Q5TF21 947 aa12.4□□□□□ -0.42
PTPRM-210ENST00000578916 NPM2Q86SE8 214 aaKnown RBP12.4□□□□□ -0.42
PTPRM-210ENST00000578916 TBC1D2BQ9UPU7 963 aa12.4□□□□□ -0.42
PTPRM-210ENST00000578916 ZNF330Q9Y3S2 320 aaPredicted RBP12.4□□□□□ -0.42
PTPRM-210ENST00000578916 SCN11AQ9UI33 1791 aa12.4□□□□□ -0.42
PTPRM-210ENST00000578916 PASKQ96RG2 1323 aa12.39□□□□□ -0.43
PTPRM-210ENST00000578916 HMOX1P09601 288 aa12.39□□□□□ -0.43
PTPRM-210ENST00000578916 ST5P78524 1137 aa12.39□□□□□ -0.43
PTPRM-210ENST00000578916 STYK1Q6J9G0 422 aa12.39□□□□□ -0.43
PTPRM-210ENST00000578916 PRPF40BQ6NWY9 871 aaKnown RBP12.39□□□□□ -0.43
PTPRM-210ENST00000578916 CNBD1Q8NA66 436 aa12.39□□□□□ -0.43
PTPRM-210ENST00000578916 SETDB2Q96T68 719 aa12.39□□□□□ -0.43
PTPRM-210ENST00000578916 TAF1DQ9H5J8 278 aaPredicted RBP12.39□□□□□ -0.43
PTPRM-210ENST00000578916 MRC1P22897 1456 aa12.39□□□□□ -0.43
PTPRM-210ENST00000578916 LBX1P52954 281 aa12.38□□□□□ -0.43
PTPRM-210ENST00000578916 MTHFSDQ2M296 383 aaKnown RBP12.38□□□□□ -0.43
PTPRM-210ENST00000578916 EAPPQ56P03 285 aaPredicted RBP12.38□□□□□ -0.43
PTPRM-210ENST00000578916 MASTLQ96GX5 879 aa12.38□□□□□ -0.43
PTPRM-210ENST00000578916 L3MBTL3Q96JM7 780 aaPredicted RBP12.38□□□□□ -0.43
PTPRM-210ENST00000578916 TEX13AQ9BXU3 409 aaPredicted RBP12.38□□□□□ -0.43
PTPRM-210ENST00000578916 WBP1LQ9NX94 342 aa12.38□□□□□ -0.43
PTPRM-210ENST00000578916 TIMELESSQ9UNS1 1208 aa12.38□□□□□ -0.43
PTPRM-210ENST00000578916 CLEC11AQ9Y240 323 aa12.38□□□□□ -0.43
PTPRM-210ENST00000578916 KNSTRNQ9Y448 316 aa12.38□□□□□ -0.43
PTPRM-210ENST00000578916 CCDC88AQ3V6T2 1871 aa12.38□□□□□ -0.43
PTPRM-210ENST00000578916 SLC34A2O95436 690 aa12.37□□□□□ -0.43
PTPRM-210ENST00000578916 SRGNP10124 158 aa12.37□□□□□ -0.43
PTPRM-210ENST00000578916 ITGBL1O95965 494 aaPredicted RBP12.36□□□□□ -0.43
PTPRM-210ENST00000578916 PRKCSHP14314 528 aaPredicted RBP12.36□□□□□ -0.43
PTPRM-210ENST00000578916 IL6STP40189 918 aaPredicted RBP12.36□□□□□ -0.43
PTPRM-210ENST00000578916 CCDC93Q567U6 631 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms