RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 TEX13AQ9BXU3 409 aaPredicted RBP21.2■□□□□ 0.98
CRLF3-203ENST00000578692 NARFQ9UHQ1 456 aa21.2■□□□□ 0.98
CRLF3-203ENST00000578692 CANXP27824 592 aaKnown RBP21.19■□□□□ 0.98
CRLF3-203ENST00000578692 N4BP2Q86UW6 1770 aaPredicted RBP21.19■□□□□ 0.98
CRLF3-203ENST00000578692 BTBD11A6QL63 1104 aa21.18■□□□□ 0.98
CRLF3-203ENST00000578692 DPEP1P16444 411 aa21.18■□□□□ 0.98
CRLF3-203ENST00000578692 DDR1Q08345 913 aa21.18■□□□□ 0.98
CRLF3-203ENST00000578692 RTF1Q92541 710 aaKnown RBP21.18■□□□□ 0.98
CRLF3-203ENST00000578692 COL15A1P39059 1388 aa21.18■□□□□ 0.98
CRLF3-203ENST00000578692 HEG1Q9ULI3 1381 aa21.18■□□□□ 0.98
CRLF3-203ENST00000578692 SIPA1L3O60292 1781 aaPredicted RBP21.17■□□□□ 0.98
CRLF3-203ENST00000578692 FMNL2Q96PY5 1086 aa21.17■□□□□ 0.98
CRLF3-203ENST00000578692 BCS1LQ9Y276 419 aa21.17■□□□□ 0.98
CRLF3-203ENST00000578692 KIAA1551Q9HCM1 1747 aa21.16■□□□□ 0.98
CRLF3-203ENST00000578692 POLRMTO00411 1230 aaKnown RBP21.16■□□□□ 0.98
CRLF3-203ENST00000578692 KCNQ3O43525 872 aa21.14■□□□□ 0.98
CRLF3-203ENST00000578692 HTATSF1O43719 755 aaKnown RBP21.14■□□□□ 0.98
CRLF3-203ENST00000578692 KCNA3P22001 575 aa21.14■□□□□ 0.98
CRLF3-203ENST00000578692 EIF5P55010 431 aaKnown RBP21.14■□□□□ 0.98
CRLF3-203ENST00000578692 MCM10Q7L590 875 aa21.14■□□□□ 0.98
CRLF3-203ENST00000578692 A0A087WZG4 1122 aa21.13■□□□□ 0.97
CRLF3-203ENST00000578692 GIGYF1O75420 1035 aaPredicted RBP21.13■□□□□ 0.97
CRLF3-203ENST00000578692 C1QTNF8P60827 252 aa21.13■□□□□ 0.97
CRLF3-203ENST00000578692 NFIXQ14938 502 aa21.13■□□□□ 0.97
CRLF3-203ENST00000578692 BCL2L12Q9HB09 334 aa21.13■□□□□ 0.97
CRLF3-203ENST00000578692 NEFMP07197 916 aa21.12■□□□□ 0.97
CRLF3-203ENST00000578692 DCTN1Q14203 1278 aa21.12■□□□□ 0.97
CRLF3-203ENST00000578692 PIM2Q9P1W9 311 aa21.12■□□□□ 0.97
CRLF3-203ENST00000578692 ATP10DQ9P241 1426 aa21.12■□□□□ 0.97
CRLF3-203ENST00000578692 A1BGP04217 495 aa21.1■□□□□ 0.97
CRLF3-203ENST00000578692 IL6STP40189 918 aaPredicted RBP21.1■□□□□ 0.97
CRLF3-203ENST00000578692 ARHGAP27Q6ZUM4 889 aa21.1■□□□□ 0.97
CRLF3-203ENST00000578692 ZNF330Q9Y3S2 320 aaPredicted RBP21.1■□□□□ 0.97
CRLF3-203ENST00000578692 SERPINB2P05120 415 aa21.1■□□□□ 0.97
CRLF3-203ENST00000578692 USP16Q9Y5T5 823 aa21.1■□□□□ 0.97
CRLF3-203ENST00000578692 ADCY9O60503 1353 aa21.09■□□□□ 0.97
CRLF3-203ENST00000578692 CHRNA5P30532 468 aa21.09■□□□□ 0.97
CRLF3-203ENST00000578692 NPM2Q86SE8 214 aaKnown RBP21.09■□□□□ 0.97
CRLF3-203ENST00000578692 GPBP1L1Q9HC44 474 aaPredicted RBP21.09■□□□□ 0.97
CRLF3-203ENST00000578692 TBC1D2BQ9UPU7 963 aa21.09■□□□□ 0.97
CRLF3-203ENST00000578692 BRCA1P38398 1863 aaKnown RBP21.09■□□□□ 0.97
CRLF3-203ENST00000578692 TAF7Q15545 349 aaPredicted RBP21.08■□□□□ 0.96
CRLF3-203ENST00000578692 DALRD3Q5D0E6 543 aaKnown RBP21.08■□□□□ 0.96
CRLF3-203ENST00000578692 BICDL1Q6ZP65 573 aa21.08■□□□□ 0.96
CRLF3-203ENST00000578692 PLEKHF1Q96S99 279 aa21.08■□□□□ 0.96
CRLF3-203ENST00000578692 SNRPA1P09661 255 aaKnown RBP21.07■□□□□ 0.96
CRLF3-203ENST00000578692 DDX10Q13206 875 aaKnown RBP21.07■□□□□ 0.96
CRLF3-203ENST00000578692 RALBP1Q15311 655 aa21.07■□□□□ 0.96
CRLF3-203ENST00000578692 ZNF526Q8TF50 670 aaPredicted RBP21.07■□□□□ 0.96
CRLF3-203ENST00000578692 PNNQ9H307 717 aaKnown RBP21.07■□□□□ 0.96
CRLF3-203ENST00000578692 AFDNP55196 1824 aaKnown RBP21.06■□□□□ 0.96
CRLF3-203ENST00000578692 PRAMEF22A3QJZ6 481 aa21.05■□□□□ 0.96
CRLF3-203ENST00000578692 TBC1D9BQ66K14 1250 aa21.05■□□□□ 0.96
CRLF3-203ENST00000578692 NRXN2Q9P2S2 1712 aa21.04■□□□□ 0.96
CRLF3-203ENST00000578692 MIS18AQ9NYP9 233 aa21.04■□□□□ 0.96
CRLF3-203ENST00000578692 NFE2L2Q16236 605 aa21.03■□□□□ 0.96
CRLF3-203ENST00000578692 ARFGEF1Q9Y6D6 1849 aa21.03■□□□□ 0.96
CRLF3-203ENST00000578692 PIP4K2AP48426 406 aaPredicted RBP21.02■□□□□ 0.96
CRLF3-203ENST00000578692 DZIP3Q86Y13 1208 aaKnown RBP21.02■□□□□ 0.96
CRLF3-203ENST00000578692 DLG5Q8TDM6 1919 aa21.02■□□□□ 0.95
CRLF3-203ENST00000578692 MAPK8IP3Q9UPT6 1336 aa21.01■□□□□ 0.95
CRLF3-203ENST00000578692 SENP3-EIF4A1A0A087X0R7 540 aa21.01■□□□□ 0.95
CRLF3-203ENST00000578692 CAMTA2O94983 1202 aa21.01■□□□□ 0.95
CRLF3-203ENST00000578692 PNISRQ8TF01 805 aaKnown RBP21.01■□□□□ 0.95
CRLF3-203ENST00000578692 SETDB2Q96T68 719 aa21■□□□□ 0.95
CRLF3-203ENST00000578692 H0YIN7 160 aa20.99■□□□□ 0.95
CRLF3-203ENST00000578692 C2CD5Q86YS7 1000 aa20.99■□□□□ 0.95
CRLF3-203ENST00000578692 SCN7AQ01118 1682 aa20.98■□□□□ 0.95
CRLF3-203ENST00000578692 C9orf131Q5VYM1 1079 aa20.98■□□□□ 0.95
CRLF3-203ENST00000578692 CARMIL3Q8ND23 1372 aa20.98■□□□□ 0.95
CRLF3-203ENST00000578692 NBPF26B4DH59 902 aa20.97■□□□□ 0.95
CRLF3-203ENST00000578692 PRR5LQ6MZQ0 368 aa20.97■□□□□ 0.95
CRLF3-203ENST00000578692 NBPF10Q6P3W6 841 aaKnown RBP20.97■□□□□ 0.95
CRLF3-203ENST00000578692 CLEC4GQ6UXB4 293 aa20.97■□□□□ 0.95
CRLF3-203ENST00000578692 NBPF15Q8N660 670 aa20.97■□□□□ 0.95
CRLF3-203ENST00000578692 TTLL6Q8N841 843 aa20.97■□□□□ 0.95
CRLF3-203ENST00000578692 BRIP1Q9BX63 1249 aa20.97■□□□□ 0.95
CRLF3-203ENST00000578692 PDE6BP35913 854 aa20.97■□□□□ 0.95
CRLF3-203ENST00000578692 THUMPD2Q9BTF0 503 aaKnown RBP20.97■□□□□ 0.95
CRLF3-203ENST00000578692 MYBBP1AQ9BQG0 1328 aaKnown RBP20.96■□□□□ 0.95
CRLF3-203ENST00000578692 CCDC24Q8N4L8 307 aa20.96■□□□□ 0.95
CRLF3-203ENST00000578692 PDZRN3Q9UPQ7 1066 aa20.96■□□□□ 0.95
CRLF3-203ENST00000578692 NPHP1O15259 732 aa20.95■□□□□ 0.94
CRLF3-203ENST00000578692 RIPK4P57078 832 aa20.95■□□□□ 0.94
CRLF3-203ENST00000578692 EIF4A1P60842 406 aaKnown RBP20.95■□□□□ 0.94
CRLF3-203ENST00000578692 ZNF652Q9Y2D9 606 aa20.95■□□□□ 0.94
CRLF3-203ENST00000578692 KIF3CO14782 793 aa20.94■□□□□ 0.94
CRLF3-203ENST00000578692 CNBD1Q8NA66 436 aa20.94■□□□□ 0.94
CRLF3-203ENST00000578692 ZNF622Q969S3 477 aaKnown RBP eCLIP20.94■□□□□ 0.941e-6■■□□□ 11.5
CRLF3-203ENST00000578692 RNF181Q9P0P0 153 aa20.94■□□□□ 0.94
CRLF3-203ENST00000578692 DLEC1Q9Y238 1755 aa20.93■□□□□ 0.94
CRLF3-203ENST00000578692 BCORQ6W2J9 1755 aa20.93■□□□□ 0.94
CRLF3-203ENST00000578692 KDM3BQ7LBC6 1761 aa20.92■□□□□ 0.94
CRLF3-203ENST00000578692 ST5P78524 1137 aa20.92■□□□□ 0.94
CRLF3-203ENST00000578692 ANKRD31Q8N7Z5 1873 aa20.92■□□□□ 0.94
CRLF3-203ENST00000578692 RGL2O15211 777 aa20.91■□□□□ 0.94
CRLF3-203ENST00000578692 TMPOP42166 694 aaKnown RBP20.91■□□□□ 0.94
CRLF3-203ENST00000578692 SBF1O95248 1867 aa20.9■□□□□ 0.94
CRLF3-203ENST00000578692 NBPF5PQ86XG9 351 aaPredicted RBP20.9■□□□□ 0.94
CRLF3-203ENST00000578692 NGEFQ8N5V2 710 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms