RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 A0A087WZG4 1122 aa14.18□□□□□ -0.14
ERBB2-206ENST00000578373 GPS2Q13227 327 aa14.18□□□□□ -0.14
ERBB2-206ENST00000578373 DNM1Q05193 864 aaKnown RBP14.18□□□□□ -0.14
ERBB2-206ENST00000578373 TEX35Q5T0J7 233 aa14.18□□□□□ -0.14
ERBB2-206ENST00000578373 ZBTB3Q9H5J0 574 aa14.18□□□□□ -0.14
ERBB2-206ENST00000578373 DDX46Q7L014 1031 aaKnown RBP14.17□□□□□ -0.14
ERBB2-206ENST00000578373 TMX1Q9H3N1 280 aa14.17□□□□□ -0.14
ERBB2-206ENST00000578373 DBF4Q9UBU7 674 aaPredicted RBP14.17□□□□□ -0.14
ERBB2-206ENST00000578373 ZBTB9Q96C00 473 aa14.17□□□□□ -0.14
ERBB2-206ENST00000578373 NSD2O96028 1365 aa14.17□□□□□ -0.14
ERBB2-206ENST00000578373 PLCH2O75038 1416 aa14.17□□□□□ -0.14
ERBB2-206ENST00000578373 ERICH4A6NGS2 130 aa14.17□□□□□ -0.14
ERBB2-206ENST00000578373 LRSAM1Q6UWE0 723 aa14.17□□□□□ -0.14
ERBB2-206ENST00000578373 GOLIM4O00461 696 aa14.16□□□□□ -0.14
ERBB2-206ENST00000578373 POLR3DP05423 398 aaPredicted RBP14.16□□□□□ -0.14
ERBB2-206ENST00000578373 SART3Q15020 963 aaKnown RBP14.16□□□□□ -0.14
ERBB2-206ENST00000578373 CFAP100Q494V2 611 aa14.16□□□□□ -0.14
ERBB2-206ENST00000578373 USP26Q9BXU7 913 aa14.16□□□□□ -0.14
ERBB2-206ENST00000578373 PHAXQ9H814 394 aaKnown RBP14.16□□□□□ -0.14
ERBB2-206ENST00000578373 PHF8Q9UPP1 1060 aa14.16□□□□□ -0.14
ERBB2-206ENST00000578373 TTC21BQ7Z4L5 1316 aa14.16□□□□□ -0.14
ERBB2-206ENST00000578373 ZNF165P49910 485 aa14.16□□□□□ -0.14
ERBB2-206ENST00000578373 LARP1Q6PKG0 1096 aaKnown RBP14.16□□□□□ -0.14
ERBB2-206ENST00000578373 KIF6Q6ZMV9 814 aa14.16□□□□□ -0.14
ERBB2-206ENST00000578373 SCAND2PQ9GZW5 306 aaPredicted RBP14.16□□□□□ -0.14
ERBB2-206ENST00000578373 CFAP65Q6ZU64 1925 aaKnown RBP14.15□□□□□ -0.14
ERBB2-206ENST00000578373 UHRF1BP1Q6BDS2 1440 aa14.15□□□□□ -0.14
ERBB2-206ENST00000578373 KRT32Q14532 448 aa14.15□□□□□ -0.14
ERBB2-206ENST00000578373 FAM173BQ6P4H8 233 aa14.15□□□□□ -0.14
ERBB2-206ENST00000578373 CCDC144CPQ8IYA2 1237 aa14.15□□□□□ -0.14
ERBB2-206ENST00000578373 ABCF2Q9UG63 623 aa14.15□□□□□ -0.14
ERBB2-206ENST00000578373 ZHX1Q9UKY1 873 aaPredicted RBP14.15□□□□□ -0.14
ERBB2-206ENST00000578373 IFIT1P09914 478 aaKnown RBP14.15□□□□□ -0.14
ERBB2-206ENST00000578373 CLIP2Q9UDT6 1046 aa14.15□□□□□ -0.14
ERBB2-206ENST00000578373 BRF1Q92994 677 aa14.15□□□□□ -0.14
ERBB2-206ENST00000578373 CWF19L2Q2TBE0 894 aaKnown RBP14.14□□□□□ -0.15
ERBB2-206ENST00000578373 HSP90AA4PQ58FG1 418 aa14.14□□□□□ -0.15
ERBB2-206ENST00000578373 KLHL10Q6JEL2 608 aa14.14□□□□□ -0.15
ERBB2-206ENST00000578373 NOL10Q9BSC4 688 aaKnown RBP14.14□□□□□ -0.15
ERBB2-206ENST00000578373 CTTNBP2Q8WZ74 1663 aa14.14□□□□□ -0.15
ERBB2-206ENST00000578373 LRRC59Q96AG4 307 aaKnown RBP14.14□□□□□ -0.15
ERBB2-206ENST00000578373 RBSNQ9H1K0 784 aa14.14□□□□□ -0.15
ERBB2-206ENST00000578373 SH2B1Q9NRF2 756 aaPredicted RBP14.14□□□□□ -0.15
ERBB2-206ENST00000578373 NUP160Q12769 1436 aa14.14□□□□□ -0.15
ERBB2-206ENST00000578373 ZSCAN22P10073 491 aaPredicted RBP14.14□□□□□ -0.15
ERBB2-206ENST00000578373 TNNT1P13805 278 aa14.14□□□□□ -0.15
ERBB2-206ENST00000578373 CEP89Q96ST8 783 aa14.14□□□□□ -0.15
ERBB2-206ENST00000578373 CHRNA2Q15822 529 aa14.13□□□□□ -0.15
ERBB2-206ENST00000578373 HSP90B2PQ58FF3 399 aa14.13□□□□□ -0.15
ERBB2-206ENST00000578373 JMYQ8N9B5 988 aa14.13□□□□□ -0.15
ERBB2-206ENST00000578373 MPHOSPH8Q99549 860 aa14.13□□□□□ -0.15
ERBB2-206ENST00000578373 GPTP24298 496 aa14.13□□□□□ -0.15
ERBB2-206ENST00000578373 PKP1Q13835 747 aa14.13□□□□□ -0.15
ERBB2-206ENST00000578373 ANKLE2Q86XL3 938 aa14.13□□□□□ -0.15
ERBB2-206ENST00000578373 FSIP1Q8NA03 581 aa14.13□□□□□ -0.15
ERBB2-206ENST00000578373 ZMYND15Q9H091 742 aa14.13□□□□□ -0.15
ERBB2-206ENST00000578373 TDO2P48775 406 aa14.13□□□□□ -0.15
ERBB2-206ENST00000578373 ATP8B2P98198 1209 aa14.13□□□□□ -0.15
ERBB2-206ENST00000578373 RBM8AQ9Y5S9 174 aaKnown RBP14.13□□□□□ -0.15
ERBB2-206ENST00000578373 PATL2C9JE40 543 aaKnown RBP14.13□□□□□ -0.15
ERBB2-206ENST00000578373 IGSF3O75054 1194 aa14.13□□□□□ -0.15
ERBB2-206ENST00000578373 XBP1P17861 261 aa14.13□□□□□ -0.15
ERBB2-206ENST00000578373 UBE2HP62256 183 aa14.13□□□□□ -0.15
ERBB2-206ENST00000578373 PTPN14Q15678 1187 aa14.13□□□□□ -0.15
ERBB2-206ENST00000578373 METTL24Q5JXM2 366 aa14.13□□□□□ -0.15
ERBB2-206ENST00000578373 CHST3Q7LGC8 479 aa14.13□□□□□ -0.15
ERBB2-206ENST00000578373 CCDC69A6NI79 296 aa14.12□□□□□ -0.15
ERBB2-206ENST00000578373 AMOTL1Q8IY63 956 aa14.12□□□□□ -0.15
ERBB2-206ENST00000578373 TRIM22Q8IYM9 498 aa14.12□□□□□ -0.15
ERBB2-206ENST00000578373 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.12□□□□□ -0.15
ERBB2-206ENST00000578373 DACT1Q9NYF0 836 aa14.12□□□□□ -0.15
ERBB2-206ENST00000578373 AK2P54819 239 aa14.12□□□□□ -0.15
ERBB2-206ENST00000578373 C8orf76Q96K31 380 aa14.12□□□□□ -0.15
ERBB2-206ENST00000578373 TRERF1Q96PN7 1200 aa14.12□□□□□ -0.15
ERBB2-206ENST00000578373 DISP1Q96F81 1524 aa14.12□□□□□ -0.15
ERBB2-206ENST00000578373 C17orf53Q8N3J3 647 aaPredicted RBP14.12□□□□□ -0.15
ERBB2-206ENST00000578373 CAGE1Q8TC20 777 aa14.12□□□□□ -0.15
ERBB2-206ENST00000578373 CCDC47Q96A33 483 aaKnown RBP14.12□□□□□ -0.15
ERBB2-206ENST00000578373 EVI5LQ96CN4 794 aa14.12□□□□□ -0.15
ERBB2-206ENST00000578373 U3KPZ7 1027 aaPredicted RBP14.12□□□□□ -0.15
ERBB2-206ENST00000578373 EYA1Q99502 592 aa14.11□□□□□ -0.15
ERBB2-206ENST00000578373 ZMYM4Q5VZL5 1548 aa14.11□□□□□ -0.15
ERBB2-206ENST00000578373 SFPQP23246 707 aaKnown RBP eCLIP14.11□□□□□ -0.15
ERBB2-206ENST00000578373 IMMTQ16891 758 aaKnown RBP14.11□□□□□ -0.15
ERBB2-206ENST00000578373 CCDC70Q6NSX1 233 aa14.11□□□□□ -0.15
ERBB2-206ENST00000578373 BICDL1Q6ZP65 573 aa14.11□□□□□ -0.15
ERBB2-206ENST00000578373 CCDC186Q7Z3E2 898 aa14.11□□□□□ -0.15
ERBB2-206ENST00000578373 PDCL3Q9H2J4 239 aa14.11□□□□□ -0.15
ERBB2-206ENST00000578373 BRMS1Q9HCU9 246 aa14.11□□□□□ -0.15
ERBB2-206ENST00000578373 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.11□□□□□ -0.158e-7■□□□□ 9.9
ERBB2-206ENST00000578373 V9GYY5 206 aaPredicted RBP14.11□□□□□ -0.15
ERBB2-206ENST00000578373 EIF4G3O43432 1585 aaKnown RBP14.11□□□□□ -0.15
ERBB2-206ENST00000578373 ARHGEF12Q9NZN5 1544 aa14.11□□□□□ -0.15
ERBB2-206ENST00000578373 CHMLP26374 656 aa14.11□□□□□ -0.15
ERBB2-206ENST00000578373 RBM25P49756 843 aaKnown RBP14.11□□□□□ -0.15
ERBB2-206ENST00000578373 MINDY4BA8MYZ0 360 aa14.11□□□□□ -0.15
ERBB2-206ENST00000578373 KIAA0556O60303 1618 aa14.1□□□□□ -0.15
ERBB2-206ENST00000578373 MAGI2Q86UL8 1455 aa14.1□□□□□ -0.15
ERBB2-206ENST00000578373 DUOX2Q9NRD8 1548 aa14.1□□□□□ -0.15
ERBB2-206ENST00000578373 CPLX3Q8WVH0 158 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms