RNA–Protein interactions for RNA: ENST00000578105.1

SKA2-203, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-203ENST00000578105 C22orf23Q9BZE7 217 aa10.27□□□□□ -0.77
SKA2-203ENST00000578105 DNAJC5Q9H3Z4 198 aa10.27□□□□□ -0.77
SKA2-203ENST00000578105 ADAMTS7Q9UKP4 1686 aa10.27□□□□□ -0.77
SKA2-203ENST00000578105 FOXO3O43524 673 aa10.26□□□□□ -0.77
SKA2-203ENST00000578105 GNAI2P04899 355 aa10.26□□□□□ -0.77
SKA2-203ENST00000578105 ATF3P18847 181 aa10.26□□□□□ -0.77
SKA2-203ENST00000578105 FLIIQ13045 1269 aa10.26□□□□□ -0.77
SKA2-203ENST00000578105 VARS2Q5ST30 1063 aaKnown RBP10.26□□□□□ -0.77
SKA2-203ENST00000578105 KRT28Q7Z3Y7 464 aa10.26□□□□□ -0.77
SKA2-203ENST00000578105 SIRT2Q8IXJ6 389 aa10.26□□□□□ -0.77
SKA2-203ENST00000578105 IL17REQ8NFR9 667 aa10.26□□□□□ -0.77
SKA2-203ENST00000578105 LNPKQ9C0E8 428 aa10.26□□□□□ -0.77
SKA2-203ENST00000578105 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.26□□□□□ -0.77
SKA2-203ENST00000578105 NPHP3Q7Z494 1330 aa10.26□□□□□ -0.77
SKA2-203ENST00000578105 CDC45O75419 566 aa10.25□□□□□ -0.77
SKA2-203ENST00000578105 C1orf141Q5JVX7 400 aa10.25□□□□□ -0.77
SKA2-203ENST00000578105 NBPF6Q5VWK0 638 aa10.25□□□□□ -0.77
SKA2-203ENST00000578105 CASC1Q6TDU7 716 aa10.25□□□□□ -0.77
SKA2-203ENST00000578105 SNX21Q969T3 373 aa10.25□□□□□ -0.77
SKA2-203ENST00000578105 NBPF4Q96M43 638 aa10.25□□□□□ -0.77
SKA2-203ENST00000578105 TEFQ10587 303 aa10.24□□□□□ -0.77
SKA2-203ENST00000578105 NUTM2GQ5VZR2 741 aa10.24□□□□□ -0.77
SKA2-203ENST00000578105 OSBPL3Q9H4L5 887 aa10.24□□□□□ -0.77
SKA2-203ENST00000578105 EPB41L2O43491 1005 aaKnown RBP10.23□□□□□ -0.77
SKA2-203ENST00000578105 EIF4A1P60842 406 aaKnown RBP10.23□□□□□ -0.77
SKA2-203ENST00000578105 FKBP5Q13451 457 aaPredicted RBP10.23□□□□□ -0.77
SKA2-203ENST00000578105 HDGFL1Q5TGJ6 251 aa10.23□□□□□ -0.77
SKA2-203ENST00000578105 ORAI2Q96SN7 254 aa10.23□□□□□ -0.77
SKA2-203ENST00000578105 SRCIN1Q9C0H9 1055 aa10.23□□□□□ -0.77
SKA2-203ENST00000578105 RNMTO43148 476 aaKnown RBP10.22□□□□□ -0.77
SKA2-203ENST00000578105 NBR1Q14596 966 aa10.22□□□□□ -0.77
SKA2-203ENST00000578105 KRT24Q2M2I5 525 aa10.22□□□□□ -0.77
SKA2-203ENST00000578105 TTC22Q5TAA0 569 aa10.22□□□□□ -0.77
SKA2-203ENST00000578105 ZNF530Q6P9A1 599 aaPredicted RBP10.22□□□□□ -0.77
SKA2-203ENST00000578105 PLEKHM2Q8IWE5 1019 aa10.22□□□□□ -0.77
SKA2-203ENST00000578105 HSCBQ8IWL3 235 aa10.22□□□□□ -0.77
SKA2-203ENST00000578105 PDCD7Q8N8D1 485 aaKnown RBP10.22□□□□□ -0.77
SKA2-203ENST00000578105 ANKRD24Q8TF21 1146 aa10.22□□□□□ -0.77
SKA2-203ENST00000578105 LTV1Q96GA3 475 aaPredicted RBP10.22□□□□□ -0.77
SKA2-203ENST00000578105 AOX1Q06278 1338 aa10.22□□□□□ -0.77
SKA2-203ENST00000578105 CPDO75976 1380 aa10.22□□□□□ -0.77
SKA2-203ENST00000578105 TMEM94Q12767 1356 aa10.22□□□□□ -0.77
SKA2-203ENST00000578105 HEG1Q9ULI3 1381 aa10.22□□□□□ -0.77
SKA2-203ENST00000578105 TNS3Q68CZ2 1445 aa10.22□□□□□ -0.77
SKA2-203ENST00000578105 SIPA1L3O60292 1781 aaPredicted RBP10.21□□□□□ -0.77
SKA2-203ENST00000578105 RAB11FIP3O75154 756 aa10.21□□□□□ -0.77
SKA2-203ENST00000578105 HSP90AB1P08238 724 aaKnown RBP10.21□□□□□ -0.77
SKA2-203ENST00000578105 MFAP1P55081 439 aaKnown RBP10.21□□□□□ -0.77
SKA2-203ENST00000578105 ATP8B2P98198 1209 aa10.21□□□□□ -0.77
SKA2-203ENST00000578105 NFKBIBQ15653 356 aa10.21□□□□□ -0.77
SKA2-203ENST00000578105 HSP90AB4PQ58FF6 505 aa10.21□□□□□ -0.77
SKA2-203ENST00000578105 ZNF687Q8N1G0 1237 aa10.21□□□□□ -0.77
SKA2-203ENST00000578105 L3MBTL3Q96JM7 780 aaPredicted RBP10.21□□□□□ -0.77
SKA2-203ENST00000578105 MEIS3Q99687 375 aa10.21□□□□□ -0.77
SKA2-203ENST00000578105 C1orf115Q9H7X2 142 aa10.21□□□□□ -0.77
SKA2-203ENST00000578105 DBF4Q9UBU7 674 aaPredicted RBP10.21□□□□□ -0.77
SKA2-203ENST00000578105 BTBD11A6QL63 1104 aa10.2□□□□□ -0.78
SKA2-203ENST00000578105 ALDH1L1O75891 902 aa10.2□□□□□ -0.78
SKA2-203ENST00000578105 ZNF710Q8N1W2 664 aa10.2□□□□□ -0.78
SKA2-203ENST00000578105 TBC1D2Q9BYX2 928 aa10.2□□□□□ -0.78
SKA2-203ENST00000578105 MIS18AQ9NYP9 233 aa10.2□□□□□ -0.78
SKA2-203ENST00000578105 CIZ1Q9ULV3 898 aaPredicted RBP10.2□□□□□ -0.78
SKA2-203ENST00000578105 SPG7Q9UQ90 795 aa10.2□□□□□ -0.78
SKA2-203ENST00000578105 RGPD2P0DJD1 1756 aa10.19□□□□□ -0.78
SKA2-203ENST00000578105 COL18A1P39060 1754 aa10.19□□□□□ -0.78
SKA2-203ENST00000578105 REC8O95072 547 aa10.19□□□□□ -0.78
SKA2-203ENST00000578105 UBTFL1P0CB47 393 aaPredicted RBP10.19□□□□□ -0.78
SKA2-203ENST00000578105 TATP17735 454 aaPredicted RBP10.19□□□□□ -0.78
SKA2-203ENST00000578105 PTMSP20962 102 aa10.19□□□□□ -0.78
SKA2-203ENST00000578105 SLC4A10Q6U841 1118 aa10.19□□□□□ -0.78
SKA2-203ENST00000578105 TBC1D9Q6ZT07 1266 aa10.19□□□□□ -0.78
SKA2-203ENST00000578105 G2E3Q7L622 706 aa10.19□□□□□ -0.78
SKA2-203ENST00000578105 RAPGEF4Q8WZA2 1011 aa10.19□□□□□ -0.78
SKA2-203ENST00000578105 HYPKQ9NX55 129 aa10.19□□□□□ -0.78
SKA2-203ENST00000578105 CHMP5Q9NZZ3 219 aa10.19□□□□□ -0.78
SKA2-203ENST00000578105 CRYBG1Q9Y4K1 1723 aa10.19□□□□□ -0.78
SKA2-203ENST00000578105 MRC1P22897 1456 aa10.18□□□□□ -0.78
SKA2-203ENST00000578105 PXDNQ92626 1479 aa10.18□□□□□ -0.78
SKA2-203ENST00000578105 DDX58O95786 925 aaKnown RBP10.18□□□□□ -0.78
SKA2-203ENST00000578105 SSH3Q8TE77 659 aa10.18□□□□□ -0.78
SKA2-203ENST00000578105 DNAAF4Q8WXU2 420 aa10.18□□□□□ -0.78
SKA2-203ENST00000578105 LRRCC1Q9C099 1032 aa10.18□□□□□ -0.78
SKA2-203ENST00000578105 ANTXR1Q9H6X2 564 aa10.18□□□□□ -0.78
SKA2-203ENST00000578105 SCN11AQ9UI33 1791 aa10.18□□□□□ -0.78
SKA2-203ENST00000578105 PKD1L3Q7Z443 1732 aa10.18□□□□□ -0.78
SKA2-203ENST00000578105 PARP4Q9UKK3 1724 aaKnown RBP10.18□□□□□ -0.78
SKA2-203ENST00000578105 STRCP1A6NGW2 1772 aa10.17□□□□□ -0.78
SKA2-203ENST00000578105 SPATA31A3Q5VYP0 1347 aa10.17□□□□□ -0.78
SKA2-203ENST00000578105 DEKP35659 375 aaKnown RBP10.17□□□□□ -0.78
SKA2-203ENST00000578105 MTX1Q13505 466 aa10.17□□□□□ -0.78
SKA2-203ENST00000578105 RABEP1Q15276 862 aa10.17□□□□□ -0.78
SKA2-203ENST00000578105 USHBP1Q8N6Y0 703 aa10.17□□□□□ -0.78
SKA2-203ENST00000578105 STAP2Q9UGK3 403 aa10.17□□□□□ -0.78
SKA2-203ENST00000578105 F6X3S4 739 aa10.16□□□□□ -0.78
SKA2-203ENST00000578105 GIGYF1O75420 1035 aaPredicted RBP10.16□□□□□ -0.78
SKA2-203ENST00000578105 GSPT1P15170 499 aaKnown RBP10.16□□□□□ -0.78
SKA2-203ENST00000578105 LMOD2Q6P5Q4 547 aa10.16□□□□□ -0.78
SKA2-203ENST00000578105 ANKRD13DQ6ZTN6 518 aa10.16□□□□□ -0.78
SKA2-203ENST00000578105 IFNL2Q8IZJ0 200 aa10.16□□□□□ -0.78
SKA2-203ENST00000578105 IRX2Q9BZI1 471 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms