RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 PPP2R1AP30153 589 aa20■□□□□ 0.79
RN7SL560P-201ENST00000577943 RSPH6AQ9H0K4 717 aa20■□□□□ 0.79
RN7SL560P-201ENST00000577943 ADCY9O60503 1353 aa19.99■□□□□ 0.79
RN7SL560P-201ENST00000577943 SENP3-EIF4A1A0A087X0R7 540 aa19.99■□□□□ 0.79
RN7SL560P-201ENST00000577943 DDR1Q08345 913 aa19.99■□□□□ 0.79
RN7SL560P-201ENST00000577943 PHACTR3Q96KR7 559 aa19.99■□□□□ 0.79
RN7SL560P-201ENST00000577943 GPBP1L1Q9HC44 474 aaPredicted RBP19.99■□□□□ 0.79
RN7SL560P-201ENST00000577943 FCHSD2O94868 740 aa19.98■□□□□ 0.79
RN7SL560P-201ENST00000577943 STARD3NLO95772 234 aa19.98■□□□□ 0.79
RN7SL560P-201ENST00000577943 U2AF1L5P0DN76 240 aaPredicted RBP19.98■□□□□ 0.79
RN7SL560P-201ENST00000577943 CANXP27824 592 aaKnown RBP19.98■□□□□ 0.79
RN7SL560P-201ENST00000577943 TM4SF1P30408 202 aa19.98■□□□□ 0.79
RN7SL560P-201ENST00000577943 U2AF1Q01081 240 aaKnown RBP eCLIP19.98■□□□□ 0.79
RN7SL560P-201ENST00000577943 ZNF790Q6PG37 636 aa19.98■□□□□ 0.79
RN7SL560P-201ENST00000577943 ZNF526Q8TF50 670 aaPredicted RBP19.98■□□□□ 0.79
RN7SL560P-201ENST00000577943 NARFQ9UHQ1 456 aa19.98■□□□□ 0.79
RN7SL560P-201ENST00000577943 POLRMTO00411 1230 aaKnown RBP19.97■□□□□ 0.79
RN7SL560P-201ENST00000577943 ZNF496Q96IT1 587 aaPredicted RBP19.97■□□□□ 0.79
RN7SL560P-201ENST00000577943 HEG1Q9ULI3 1381 aa19.96■□□□□ 0.79
RN7SL560P-201ENST00000577943 CEMIPQ8WUJ3 1361 aa19.95■□□□□ 0.79
RN7SL560P-201ENST00000577943 KCNA3P22001 575 aa19.95■□□□□ 0.78
RN7SL560P-201ENST00000577943 ARHGAP27Q6ZUM4 889 aa19.95■□□□□ 0.78
RN7SL560P-201ENST00000577943 TEX13AQ9BXU3 409 aaPredicted RBP19.95■□□□□ 0.78
RN7SL560P-201ENST00000577943 PIM2Q9P1W9 311 aa19.95■□□□□ 0.78
RN7SL560P-201ENST00000577943 NFIXQ14938 502 aa19.94■□□□□ 0.78
RN7SL560P-201ENST00000577943 RTF1Q92541 710 aaKnown RBP19.94■□□□□ 0.78
RN7SL560P-201ENST00000577943 FMNL2Q96PY5 1086 aa19.94■□□□□ 0.78
RN7SL560P-201ENST00000577943 NRXN2Q9P2S2 1712 aa19.93■□□□□ 0.78
RN7SL560P-201ENST00000577943 BTBD11A6QL63 1104 aa19.93■□□□□ 0.78
RN7SL560P-201ENST00000577943 ZNF330Q9Y3S2 320 aaPredicted RBP19.93■□□□□ 0.78
RN7SL560P-201ENST00000577943 DLG5Q8TDM6 1919 aa19.93■□□□□ 0.78
RN7SL560P-201ENST00000577943 A0A087WZG4 1122 aa19.92■□□□□ 0.78
RN7SL560P-201ENST00000577943 EIF5P55010 431 aaKnown RBP19.92■□□□□ 0.78
RN7SL560P-201ENST00000577943 BCL2L12Q9HB09 334 aa19.92■□□□□ 0.78
RN7SL560P-201ENST00000577943 CHRNA5P30532 468 aa19.91■□□□□ 0.78
RN7SL560P-201ENST00000577943 DALRD3Q5D0E6 543 aaKnown RBP19.91■□□□□ 0.78
RN7SL560P-201ENST00000577943 SBF1O95248 1867 aa19.9■□□□□ 0.78
RN7SL560P-201ENST00000577943 KCNQ3O43525 872 aa19.9■□□□□ 0.78
RN7SL560P-201ENST00000577943 SERPINB2P05120 415 aa19.9■□□□□ 0.78
RN7SL560P-201ENST00000577943 NPM2Q86SE8 214 aaKnown RBP19.9■□□□□ 0.78
RN7SL560P-201ENST00000577943 SCN7AQ01118 1682 aa19.89■□□□□ 0.77
RN7SL560P-201ENST00000577943 BICDL1Q6ZP65 573 aa19.89■□□□□ 0.77
RN7SL560P-201ENST00000577943 MCM10Q7L590 875 aa19.89■□□□□ 0.77
RN7SL560P-201ENST00000577943 DLEC1Q9Y238 1755 aa19.89■□□□□ 0.77
RN7SL560P-201ENST00000577943 A1BGP04217 495 aa19.88■□□□□ 0.77
RN7SL560P-201ENST00000577943 NEFMP07197 916 aa19.88■□□□□ 0.77
RN7SL560P-201ENST00000577943 IL6STP40189 918 aaPredicted RBP19.88■□□□□ 0.77
RN7SL560P-201ENST00000577943 TBC1D2BQ9UPU7 963 aa19.88■□□□□ 0.77
RN7SL560P-201ENST00000577943 DCTN1Q14203 1278 aa19.87■□□□□ 0.77
RN7SL560P-201ENST00000577943 CCDC88AQ3V6T2 1871 aa19.86■□□□□ 0.77
RN7SL560P-201ENST00000577943 HTATSF1O43719 755 aaKnown RBP19.86■□□□□ 0.77
RN7SL560P-201ENST00000577943 C9orf131Q5VYM1 1079 aa19.85■□□□□ 0.77
RN7SL560P-201ENST00000577943 TBC1D9BQ66K14 1250 aa19.85■□□□□ 0.77
RN7SL560P-201ENST00000577943 USP16Q9Y5T5 823 aa19.85■□□□□ 0.77
RN7SL560P-201ENST00000577943 ANKRD31Q8N7Z5 1873 aa19.85■□□□□ 0.77
RN7SL560P-201ENST00000577943 BCORQ6W2J9 1755 aa19.85■□□□□ 0.77
RN7SL560P-201ENST00000577943 SNRPA1P09661 255 aaKnown RBP19.83■□□□□ 0.77
RN7SL560P-201ENST00000577943 PRAMEF22A3QJZ6 481 aa19.82■□□□□ 0.76
RN7SL560P-201ENST00000577943 H0YIN7 160 aa19.82■□□□□ 0.76
RN7SL560P-201ENST00000577943 KIF3CO14782 793 aa19.82■□□□□ 0.76
RN7SL560P-201ENST00000577943 PIP4K2AP48426 406 aaPredicted RBP19.82■□□□□ 0.76
RN7SL560P-201ENST00000577943 DZIP3Q86Y13 1208 aaKnown RBP19.82■□□□□ 0.76
RN7SL560P-201ENST00000577943 C2CD5Q86YS7 1000 aa19.82■□□□□ 0.76
RN7SL560P-201ENST00000577943 CARMIL3Q8ND23 1372 aa19.82■□□□□ 0.76
RN7SL560P-201ENST00000577943 TAF7Q15545 349 aaPredicted RBP19.81■□□□□ 0.76
RN7SL560P-201ENST00000577943 RNF181Q9P0P0 153 aa19.81■□□□□ 0.76
RN7SL560P-201ENST00000577943 CACNA1SQ13698 1873 aa19.81■□□□□ 0.76
RN7SL560P-201ENST00000577943 NPHP1O15259 732 aa19.8■□□□□ 0.76
RN7SL560P-201ENST00000577943 CAMTA2O94983 1202 aa19.8■□□□□ 0.76
RN7SL560P-201ENST00000577943 TTLL6Q8N841 843 aa19.8■□□□□ 0.76
RN7SL560P-201ENST00000577943 SETDB2Q96T68 719 aa19.8■□□□□ 0.76
RN7SL560P-201ENST00000577943 LAMB4A4D0S4 1761 aa19.8■□□□□ 0.76
RN7SL560P-201ENST00000577943 CEP350Q5VT06 3117 aa19.79■□□□□ 0.76
RN7SL560P-201ENST00000577943 PNNQ9H307 717 aaKnown RBP19.79■□□□□ 0.76
RN7SL560P-201ENST00000577943 MIS18AQ9NYP9 233 aa19.79■□□□□ 0.76
RN7SL560P-201ENST00000577943 KDM3BQ7LBC6 1761 aa19.78■□□□□ 0.76
RN7SL560P-201ENST00000577943 PDE6BP35913 854 aa19.78■□□□□ 0.76
RN7SL560P-201ENST00000577943 PRR5LQ6MZQ0 368 aa19.78■□□□□ 0.76
RN7SL560P-201ENST00000577943 CCDC24Q8N4L8 307 aa19.78■□□□□ 0.76
RN7SL560P-201ENST00000577943 PLEKHF1Q96S99 279 aa19.78■□□□□ 0.76
RN7SL560P-201ENST00000577943 COL11A2P13942 1736 aaPredicted RBP19.78■□□□□ 0.76
RN7SL560P-201ENST00000577943 MAPK8IP3Q9UPT6 1336 aa19.77■□□□□ 0.76
RN7SL560P-201ENST00000577943 RASSF7Q02833 373 aa19.77■□□□□ 0.76
RN7SL560P-201ENST00000577943 ZNF622Q969S3 477 aaKnown RBP eCLIP19.77■□□□□ 0.76
RN7SL560P-201ENST00000577943 BRIP1Q9BX63 1249 aa19.77■□□□□ 0.76
RN7SL560P-201ENST00000577943 NMRK2Q9NPI5 230 aa19.77■□□□□ 0.76
RN7SL560P-201ENST00000577943 PDZRN3Q9UPQ7 1066 aa19.77■□□□□ 0.76
RN7SL560P-201ENST00000577943 HSPA6P17066 643 aa19.76■□□□□ 0.75
RN7SL560P-201ENST00000577943 NFE2L2Q16236 605 aa19.76■□□□□ 0.75
RN7SL560P-201ENST00000577943 CNBD1Q8NA66 436 aa19.76■□□□□ 0.75
RN7SL560P-201ENST00000577943 PNISRQ8TF01 805 aaKnown RBP19.76■□□□□ 0.75
RN7SL560P-201ENST00000577943 ZNF652Q9Y2D9 606 aa19.76■□□□□ 0.75
RN7SL560P-201ENST00000577943 ST5P78524 1137 aa19.75■□□□□ 0.75
RN7SL560P-201ENST00000577943 RALBP1Q15311 655 aa19.75■□□□□ 0.75
RN7SL560P-201ENST00000577943 CLEC4GQ6UXB4 293 aa19.75■□□□□ 0.75
RN7SL560P-201ENST00000577943 KDM2BQ8NHM5 1336 aa19.75■□□□□ 0.75
RN7SL560P-201ENST00000577943 NBPF26B4DH59 902 aa19.74■□□□□ 0.75
RN7SL560P-201ENST00000577943 TOMM70O94826 608 aa19.74■□□□□ 0.75
RN7SL560P-201ENST00000577943 NBPF10Q6P3W6 841 aaKnown RBP19.74■□□□□ 0.75
RN7SL560P-201ENST00000577943 NBPF15Q8N660 670 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms