RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 MYBBP1AQ9BQG0 1328 aaKnown RBP18.7■□□□□ 0.58
SREBF1-217ENST00000577897 KDM6AO15550 1401 aaPredicted RBP18.69■□□□□ 0.58
SREBF1-217ENST00000577897 PANK3Q9H999 370 aa18.69■□□□□ 0.58
SREBF1-217ENST00000577897 USP42Q9H9J4 1324 aaKnown RBP18.69■□□□□ 0.58
SREBF1-217ENST00000577897 MYH14Q7Z406 1995 aaKnown RBP18.68■□□□□ 0.58
SREBF1-217ENST00000577897 CRKLP46109 303 aaKnown RBP18.67■□□□□ 0.58
SREBF1-217ENST00000577897 POLRMTO00411 1230 aaKnown RBP18.66■□□□□ 0.58
SREBF1-217ENST00000577897 PTCD1O75127 700 aaKnown RBP18.66■□□□□ 0.58
SREBF1-217ENST00000577897 CTCFP49711 727 aaPredicted RBP18.66■□□□□ 0.58
SREBF1-217ENST00000577897 CREBZFQ9NS37 354 aa18.66■□□□□ 0.58
SREBF1-217ENST00000577897 ERVV-2B6SEH9 535 aa18.65■□□□□ 0.58
SREBF1-217ENST00000577897 AIDAQ96BJ3 306 aa18.65■□□□□ 0.58
SREBF1-217ENST00000577897 ANKRD26Q9UPS8 1709 aa18.64■□□□□ 0.57
SREBF1-217ENST00000577897 POTECB2RU33 542 aa18.64■□□□□ 0.57
SREBF1-217ENST00000577897 CABP4P57796 275 aa18.64■□□□□ 0.57
SREBF1-217ENST00000577897 MLLT1Q03111 559 aaPredicted RBP18.64■□□□□ 0.57
SREBF1-217ENST00000577897 CCDC88AQ3V6T2 1871 aa18.64■□□□□ 0.57
SREBF1-217ENST00000577897 PER1O15534 1290 aaPredicted RBP18.63■□□□□ 0.57
SREBF1-217ENST00000577897 DPY19L2Q6NUT2 758 aa18.63■□□□□ 0.57
SREBF1-217ENST00000577897 ABHD8Q96I13 439 aa18.63■□□□□ 0.57
SREBF1-217ENST00000577897 NPC1L1Q9UHC9 1359 aa18.62■□□□□ 0.57
SREBF1-217ENST00000577897 NFKBIEO00221 500 aa18.61■□□□□ 0.57
SREBF1-217ENST00000577897 ZPR1O75312 459 aa18.61■□□□□ 0.57
SREBF1-217ENST00000577897 HSP90AB1P08238 724 aaKnown RBP18.61■□□□□ 0.57
SREBF1-217ENST00000577897 TM4SF1P30408 202 aa18.61■□□□□ 0.57
SREBF1-217ENST00000577897 HNRNPUQ00839 825 aaKnown RBP eCLIP18.61■□□□□ 0.57
SREBF1-217ENST00000577897 USPL1Q5W0Q7 1092 aa18.61■□□□□ 0.57
SREBF1-217ENST00000577897 CHADLQ6NUI6 762 aa18.61■□□□□ 0.57
SREBF1-217ENST00000577897 TTLL6Q8N841 843 aa18.61■□□□□ 0.57
SREBF1-217ENST00000577897 TJP1Q07157 1748 aa18.6■□□□□ 0.57
SREBF1-217ENST00000577897 CNTNAP1P78357 1384 aa18.6■□□□□ 0.57
SREBF1-217ENST00000577897 FAM9BQ8IZU0 186 aa18.6■□□□□ 0.57
SREBF1-217ENST00000577897 DLEC1Q9Y238 1755 aa18.6■□□□□ 0.57
SREBF1-217ENST00000577897 AFDNP55196 1824 aaKnown RBP18.59■□□□□ 0.57
SREBF1-217ENST00000577897 POTEIP0CG38 1075 aa18.59■□□□□ 0.57
SREBF1-217ENST00000577897 POTEJP0CG39 1038 aa18.59■□□□□ 0.57
SREBF1-217ENST00000577897 GTF3C3Q9Y5Q9 886 aa18.59■□□□□ 0.57
SREBF1-217ENST00000577897 LBX1P52954 281 aa18.58■□□□□ 0.56
SREBF1-217ENST00000577897 CNGB1Q14028 1251 aaPredicted RBP18.58■□□□□ 0.56
SREBF1-217ENST00000577897 EIF4A2Q14240 407 aaKnown RBP18.58■□□□□ 0.56
SREBF1-217ENST00000577897 ZNF530Q6P9A1 599 aaPredicted RBP18.58■□□□□ 0.56
SREBF1-217ENST00000577897 C2CD5Q86YS7 1000 aa18.58■□□□□ 0.56
SREBF1-217ENST00000577897 ZNF219Q9P2Y4 722 aaPredicted RBP18.58■□□□□ 0.56
SREBF1-217ENST00000577897 ADAMTS7Q9UKP4 1686 aa18.57■□□□□ 0.56
SREBF1-217ENST00000577897 RGS19P49795 217 aa18.57■□□□□ 0.56
SREBF1-217ENST00000577897 NFIXQ14938 502 aa18.57■□□□□ 0.56
SREBF1-217ENST00000577897 ERFEQ4G0M1 354 aa18.57■□□□□ 0.56
SREBF1-217ENST00000577897 CARD14Q9BXL6 1004 aa18.57■□□□□ 0.56
SREBF1-217ENST00000577897 PDE4DIPQ5VU43 2346 aa18.56■□□□□ 0.56
SREBF1-217ENST00000577897 PLEKHO1Q53GL0 409 aaPredicted RBP18.56■□□□□ 0.56
SREBF1-217ENST00000577897 INTS5Q6P9B9 1019 aaKnown RBP18.56■□□□□ 0.56
SREBF1-217ENST00000577897 TNRC18O15417 2968 aaPredicted RBP18.56■□□□□ 0.56
SREBF1-217ENST00000577897 SERPINB2P05120 415 aa18.55■□□□□ 0.56
SREBF1-217ENST00000577897 VEGFBP49765 207 aa18.55■□□□□ 0.56
SREBF1-217ENST00000577897 MTHFSP49914 203 aa18.55■□□□□ 0.56
SREBF1-217ENST00000577897 CC2D1BQ5T0F9 858 aaKnown RBP18.55■□□□□ 0.56
SREBF1-217ENST00000577897 WBP1LQ9NX94 342 aa18.55■□□□□ 0.56
SREBF1-217ENST00000577897 POLKQ9UBT6 870 aa18.55■□□□□ 0.56
SREBF1-217ENST00000577897 CARMIL3Q8ND23 1372 aa18.55■□□□□ 0.56
SREBF1-217ENST00000577897 NRXN2Q9P2S2 1712 aa18.54■□□□□ 0.56
SREBF1-217ENST00000577897 VIRMAQ69YN4 1812 aaKnown RBP18.54■□□□□ 0.56
SREBF1-217ENST00000577897 H0YIN7 160 aa18.54■□□□□ 0.56
SREBF1-217ENST00000577897 NFATC2IPQ8NCF5 419 aa18.54■□□□□ 0.56
SREBF1-217ENST00000577897 DDNO94850 711 aaPredicted RBP18.53■□□□□ 0.56
SREBF1-217ENST00000577897 TNNT2P45379 298 aaPredicted RBP18.53■□□□□ 0.56
SREBF1-217ENST00000577897 DNAJC10Q8IXB1 793 aa18.53■□□□□ 0.56
SREBF1-217ENST00000577897 SOS1Q07889 1333 aaPredicted RBP18.52■□□□□ 0.56
SREBF1-217ENST00000577897 CCDC85CA6NKD9 419 aa18.52■□□□□ 0.56
SREBF1-217ENST00000577897 C21orf2O43822 256 aa18.52■□□□□ 0.56
SREBF1-217ENST00000577897 C1orf141Q5JVX7 400 aa18.52■□□□□ 0.56
SREBF1-217ENST00000577897 ZNF622Q969S3 477 aaKnown RBP eCLIP18.52■□□□□ 0.56
SREBF1-217ENST00000577897 ZBED9Q6R2W3 1325 aa18.51■□□□□ 0.55
SREBF1-217ENST00000577897 PNISRQ8TF01 805 aaKnown RBP18.51■□□□□ 0.55
SREBF1-217ENST00000577897 NARFQ9UHQ1 456 aa18.51■□□□□ 0.55
SREBF1-217ENST00000577897 COL15A1P39059 1388 aa18.51■□□□□ 0.55
SREBF1-217ENST00000577897 DICER1Q9UPY3 1922 aaKnown RBP18.51■□□□□ 0.55
SREBF1-217ENST00000577897 PASKQ96RG2 1323 aa18.5■□□□□ 0.55
SREBF1-217ENST00000577897 TMEM88BA6NKF7 163 aa18.5■□□□□ 0.55
SREBF1-217ENST00000577897 HSPA8P11142 646 aaKnown RBP18.5■□□□□ 0.55
SREBF1-217ENST00000577897 AMOTQ4VCS5 1084 aa18.5■□□□□ 0.55
SREBF1-217ENST00000577897 CCDC184Q52MB2 194 aa18.5■□□□□ 0.55
SREBF1-217ENST00000577897 BICDL1Q6ZP65 573 aa18.5■□□□□ 0.55
SREBF1-217ENST00000577897 NEFLP07196 543 aa18.49■□□□□ 0.55
SREBF1-217ENST00000577897 AMER1Q5JTC6 1135 aaPredicted RBP18.49■□□□□ 0.55
SREBF1-217ENST00000577897 LDHDQ86WU2 507 aa18.49■□□□□ 0.55
SREBF1-217ENST00000577897 TAOK3Q9H2K8 898 aa18.48■□□□□ 0.55
SREBF1-217ENST00000577897 BCL2L12Q9HB09 334 aa18.48■□□□□ 0.55
SREBF1-217ENST00000577897 ZBTB1Q9Y2K1 713 aa18.48■□□□□ 0.55
SREBF1-217ENST00000577897 FER1L6Q2WGJ9 1857 aa18.48■□□□□ 0.55
SREBF1-217ENST00000577897 IQCA1LA6NCM1 817 aa18.47■□□□□ 0.55
SREBF1-217ENST00000577897 EAPPQ56P03 285 aaPredicted RBP18.47■□□□□ 0.55
SREBF1-217ENST00000577897 CCDC24Q8N4L8 307 aa18.46■□□□□ 0.55
SREBF1-217ENST00000577897 COL11A2P13942 1736 aaPredicted RBP18.46■□□□□ 0.55
SREBF1-217ENST00000577897 CYP19A1P11511 503 aaPredicted RBP18.45■□□□□ 0.54
SREBF1-217ENST00000577897 AEBP1Q8IUX7 1158 aa18.45■□□□□ 0.54
SREBF1-217ENST00000577897 CLEC11AQ9Y240 323 aa18.45■□□□□ 0.54
SREBF1-217ENST00000577897 ANKRD31Q8N7Z5 1873 aa18.45■□□□□ 0.54
SREBF1-217ENST00000577897 MAP2K1Q02750 393 aaPredicted RBP18.44■□□□□ 0.54
SREBF1-217ENST00000577897 TAF1DQ9H5J8 278 aaPredicted RBP18.44■□□□□ 0.54
SREBF1-217ENST00000577897 SCN11AQ9UI33 1791 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms