RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 HSP90AB4PQ58FF6 505 aa5.12□□□□□ -1.59
CDH8-205ENST00000577730 GIMAP6Q6P9H5 292 aa5.12□□□□□ -1.59
CDH8-205ENST00000577730 DDX27Q96GQ7 796 aaKnown RBP5.12□□□□□ -1.59
CDH8-205ENST00000577730 ODF2LQ9ULJ1 636 aa5.12□□□□□ -1.59
CDH8-205ENST00000577730 PAFAH1B1P43034 410 aa5.12□□□□□ -1.59
CDH8-205ENST00000577730 SART3Q15020 963 aaKnown RBP5.12□□□□□ -1.59
CDH8-205ENST00000577730 TSNAXIP1Q2TAA8 658 aa5.12□□□□□ -1.59
CDH8-205ENST00000577730 LRPPRCP42704 1394 aaKnown RBP5.12□□□□□ -1.59
CDH8-205ENST00000577730 LUC7L3O95232 432 aaKnown RBP5.11□□□□□ -1.59
CDH8-205ENST00000577730 IFIT2P09913 472 aaKnown RBP5.11□□□□□ -1.59
CDH8-205ENST00000577730 SLFN5Q08AF3 891 aa5.11□□□□□ -1.59
CDH8-205ENST00000577730 CABS1Q96KC9 395 aa5.11□□□□□ -1.59
CDH8-205ENST00000577730 GOPCQ9HD26 462 aa5.11□□□□□ -1.59
CDH8-205ENST00000577730 PLEKHH2Q8IVE3 1493 aa5.11□□□□□ -1.59
CDH8-205ENST00000577730 RAD51AP2Q09MP3 1159 aa5.11□□□□□ -1.59
CDH8-205ENST00000577730 SEPT7Q16181 437 aaKnown RBP5.11□□□□□ -1.59
CDH8-205ENST00000577730 CNTROBQ8N137 903 aa5.11□□□□□ -1.59
CDH8-205ENST00000577730 NBPF3Q9H094 633 aa5.11□□□□□ -1.59
CDH8-205ENST00000577730 SLC24A3Q9HC58 644 aa5.11□□□□□ -1.59
CDH8-205ENST00000577730 N4BP2L2Q92802 583 aaPredicted RBP5.11□□□□□ -1.59
CDH8-205ENST00000577730 NAA15Q9BXJ9 866 aaKnown RBP5.11□□□□□ -1.59
CDH8-205ENST00000577730 PIP4K2BP78356 416 aa5.11□□□□□ -1.59
CDH8-205ENST00000577730 HDGFL2Q7Z4V5 671 aaPredicted RBP5.11□□□□□ -1.59
CDH8-205ENST00000577730 ZMAT2Q96NC0 199 aaKnown RBP5.11□□□□□ -1.59
CDH8-205ENST00000577730 MIA2Q96PC5 1412 aa5.11□□□□□ -1.59
CDH8-205ENST00000577730 CCDC160A6NGH7 325 aa5.11□□□□□ -1.59
CDH8-205ENST00000577730 GUCY2CP25092 1073 aa5.11□□□□□ -1.59
CDH8-205ENST00000577730 SNCBQ16143 134 aa5.11□□□□□ -1.59
CDH8-205ENST00000577730 EHBP1Q8NDI1 1231 aa5.11□□□□□ -1.59
CDH8-205ENST00000577730 CEP63Q96MT8 703 aa5.11□□□□□ -1.59
CDH8-205ENST00000577730 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.11□□□□□ -1.59
CDH8-205ENST00000577730 FKBP5Q13451 457 aaPredicted RBP5.11□□□□□ -1.59
CDH8-205ENST00000577730 ELP1O95163 1332 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 ANAPC15P60006 121 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 ANO6Q4KMQ2 910 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 BMP2KLQ5H9B9 411 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 USP48Q86UV5 1035 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 TBC1D31Q96DN5 1066 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 CCDC113Q9H0I3 377 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 FRMD3A2A2Y4 597 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 CREB3O43889 395 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 ZEB2O60315 1214 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 PFDN1O60925 122 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 CCDC40Q4G0X9 1142 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 FERMT3Q86UX7 667 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 CALR3Q96L12 384 aaKnown RBP5.1□□□□□ -1.59
CDH8-205ENST00000577730 JPH2Q9BR39 696 aaPredicted RBP5.1□□□□□ -1.59
CDH8-205ENST00000577730 CCDC88BA6NC98 1476 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 ERBB4Q15303 1308 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 KLHL10Q6JEL2 608 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 GAS2L3Q86XJ1 694 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 EXOC4Q96A65 974 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 IGHDP01880 384 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 PPP2R1AP30153 589 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 ZBTB17Q13105 803 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 WHAMMQ8TF30 809 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 SAAL1Q96ER3 474 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 ZNF215Q9UL58 517 aaPredicted RBP5.1□□□□□ -1.59
CDH8-205ENST00000577730 SMIM24O75264 130 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 DESP17661 470 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 MXRA7P84157 204 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 ATP11AP98196 1134 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 SPECC1Q5M775 1068 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 SH2B1Q9NRF2 756 aaPredicted RBP5.1□□□□□ -1.59
CDH8-205ENST00000577730 DDX41Q9UJV9 622 aaKnown RBP5.1□□□□□ -1.59
CDH8-205ENST00000577730 GOLGA6CA6NDK9 693 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 STX6O43752 255 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 YEATS4O95619 227 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 GOLGA6DP0CG33 693 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 MAP7Q14244 749 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 BRD3Q15059 726 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 SPA17Q15506 151 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 DDX46Q7L014 1031 aaKnown RBP5.1□□□□□ -1.59
CDH8-205ENST00000577730 IFT74Q96LB3 600 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 FAM114A2Q9NRY5 505 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 GOLGA6AQ9NYA3 693 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 SAMD15Q9P1V8 674 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 CCDC144AA2RUR9 1427 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 NUP155O75694 1391 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 GNAI1P63096 354 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 TUBB2AQ13885 445 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 CCDC30Q5VVM6 783 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 ISM2Q6H9L7 571 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 CCDC129Q6ZRS4 1044 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 CPLX4Q7Z7G2 160 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 TUBB2BQ9BVA1 445 aa5.1□□□□□ -1.59
CDH8-205ENST00000577730 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.1□□□□□ -1.59
CDH8-205ENST00000577730 GBP1P32455 592 aa5.09□□□□□ -1.59
CDH8-205ENST00000577730 CCDC92Q53HC0 331 aaPredicted RBP5.09□□□□□ -1.59
CDH8-205ENST00000577730 CACNA2D3Q8IZS8 1091 aa5.09□□□□□ -1.59
CDH8-205ENST00000577730 LRRD1A4D1F6 860 aa5.09□□□□□ -1.59
CDH8-205ENST00000577730 ANKRD62A6NC57 917 aa5.09□□□□□ -1.59
CDH8-205ENST00000577730 EXOSC9Q06265 439 aaKnown RBP5.09□□□□□ -1.59
CDH8-205ENST00000577730 LRRFIP1Q32MZ4 808 aaKnown RBP5.09□□□□□ -1.59
CDH8-205ENST00000577730 GAS2L2Q8NHY3 880 aa5.09□□□□□ -1.59
CDH8-205ENST00000577730 RIPOR2Q9Y4F9 1068 aa5.09□□□□□ -1.59
CDH8-205ENST00000577730 MRFAP1Q9Y605 127 aa5.09□□□□□ -1.59
CDH8-205ENST00000577730 RRBP1Q9P2E9 1410 aaKnown RBP5.09□□□□□ -1.59
CDH8-205ENST00000577730 PPFIA3O75145 1194 aa5.09□□□□□ -1.59
CDH8-205ENST00000577730 RHOXF2BP0C7M4 288 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms