RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 LGR6Q9HBX8 967 aa19.16■□□□□ 0.66
SMARCD2-205ENST00000577686 RNF181Q9P0P0 153 aa19.16■□□□□ 0.66
SMARCD2-205ENST00000577686 ARFGEF1Q9Y6D6 1849 aa19.16■□□□□ 0.66
SMARCD2-205ENST00000577686 ZC3H4Q9UPT8 1303 aaKnown RBP19.15■□□□□ 0.66
SMARCD2-205ENST00000577686 BRCA1P38398 1863 aaKnown RBP19.14■□□□□ 0.65
SMARCD2-205ENST00000577686 TEFQ10587 303 aa19.14■□□□□ 0.65
SMARCD2-205ENST00000577686 SLC39A6Q13433 755 aa19.14■□□□□ 0.65
SMARCD2-205ENST00000577686 GAS2L2Q8NHY3 880 aa19.14■□□□□ 0.65
SMARCD2-205ENST00000577686 TEX13AQ9BXU3 409 aaPredicted RBP19.14■□□□□ 0.65
SMARCD2-205ENST00000577686 NMRK2Q9NPI5 230 aa19.14■□□□□ 0.65
SMARCD2-205ENST00000577686 CHRNA5P30532 468 aa19.13■□□□□ 0.65
SMARCD2-205ENST00000577686 FSTL1Q12841 308 aa19.13■□□□□ 0.65
SMARCD2-205ENST00000577686 MTHFSDQ2M296 383 aaKnown RBP19.13■□□□□ 0.65
SMARCD2-205ENST00000577686 CC2D1BQ5T0F9 858 aaKnown RBP19.13■□□□□ 0.65
SMARCD2-205ENST00000577686 KCPQ6ZWJ8 1503 aa19.12■□□□□ 0.65
SMARCD2-205ENST00000577686 PDZRN3Q9UPQ7 1066 aa19.12■□□□□ 0.65
SMARCD2-205ENST00000577686 ZBTB1Q9Y2K1 713 aa19.12■□□□□ 0.65
SMARCD2-205ENST00000577686 NPC1L1Q9UHC9 1359 aa19.11■□□□□ 0.65
SMARCD2-205ENST00000577686 U2SURPO15042 1029 aaKnown RBP19.11■□□□□ 0.65
SMARCD2-205ENST00000577686 SERPINB2P05120 415 aa19.11■□□□□ 0.65
SMARCD2-205ENST00000577686 NFIXQ14938 502 aa19.11■□□□□ 0.65
SMARCD2-205ENST00000577686 GNAT3A8MTJ3 354 aa19.1■□□□□ 0.65
SMARCD2-205ENST00000577686 H0YIN7 160 aa19.1■□□□□ 0.65
SMARCD2-205ENST00000577686 CANXP27824 592 aaKnown RBP19.1■□□□□ 0.65
SMARCD2-205ENST00000577686 TTLL6Q8N841 843 aa19.1■□□□□ 0.65
SMARCD2-205ENST00000577686 CFAP53Q96M91 514 aa19.1■□□□□ 0.65
SMARCD2-205ENST00000577686 ADAMTS7Q9UKP4 1686 aa19.09■□□□□ 0.65
SMARCD2-205ENST00000577686 LMNB1P20700 586 aa19.08■□□□□ 0.64
SMARCD2-205ENST00000577686 PER1O15534 1290 aaPredicted RBP19.07■□□□□ 0.64
SMARCD2-205ENST00000577686 C2CD5Q86YS7 1000 aa19.07■□□□□ 0.64
SMARCD2-205ENST00000577686 TNRC6CQ9HCJ0 1690 aaKnown RBP19.07■□□□□ 0.64
SMARCD2-205ENST00000577686 HEG1Q9ULI3 1381 aa19.06■□□□□ 0.64
SMARCD2-205ENST00000577686 NPHP1O15259 732 aa19.06■□□□□ 0.64
SMARCD2-205ENST00000577686 PDE6BP35913 854 aa19.06■□□□□ 0.64
SMARCD2-205ENST00000577686 ZNF790Q6PG37 636 aa19.06■□□□□ 0.64
SMARCD2-205ENST00000577686 SMC1BQ8NDV3 1235 aa19.06■□□□□ 0.64
SMARCD2-205ENST00000577686 FMNL2Q96PY5 1086 aa19.06■□□□□ 0.64
SMARCD2-205ENST00000577686 EIF5P55010 431 aaKnown RBP19.05■□□□□ 0.64
SMARCD2-205ENST00000577686 BICDL1Q6ZP65 573 aa19.05■□□□□ 0.64
SMARCD2-205ENST00000577686 RRAGCQ9HB90 399 aa19.05■□□□□ 0.64
SMARCD2-205ENST00000577686 NUDCQ9Y266 331 aa19.05■□□□□ 0.64
SMARCD2-205ENST00000577686 ZNF330Q9Y3S2 320 aaPredicted RBP19.05■□□□□ 0.64
SMARCD2-205ENST00000577686 CEP350Q5VT06 3117 aa19.05■□□□□ 0.64
SMARCD2-205ENST00000577686 NRXN2Q9P2S2 1712 aa19.05■□□□□ 0.64
SMARCD2-205ENST00000577686 CARMIL3Q8ND23 1372 aa19.05■□□□□ 0.64
SMARCD2-205ENST00000577686 UBR2Q8IWV8 1755 aa19.04■□□□□ 0.64
SMARCD2-205ENST00000577686 IL6STP40189 918 aaPredicted RBP19.04■□□□□ 0.64
SMARCD2-205ENST00000577686 RASSF7Q02833 373 aa19.03■□□□□ 0.64
SMARCD2-205ENST00000577686 ZNF496Q96IT1 587 aaPredicted RBP19.03■□□□□ 0.64
SMARCD2-205ENST00000577686 BCL2L12Q9HB09 334 aa19.03■□□□□ 0.64
SMARCD2-205ENST00000577686 COL3A1P02461 1466 aaPredicted RBP19.03■□□□□ 0.64
SMARCD2-205ENST00000577686 VEGFAP15692 232 aaPredicted RBP19.02■□□□□ 0.64
SMARCD2-205ENST00000577686 BRIP1Q9BX63 1249 aa19.02■□□□□ 0.64
SMARCD2-205ENST00000577686 WDR90Q96KV7 1748 aa19.02■□□□□ 0.63
SMARCD2-205ENST00000577686 GLTPD2A6NH11 291 aa19.01■□□□□ 0.63
SMARCD2-205ENST00000577686 ST5P78524 1137 aa19.01■□□□□ 0.63
SMARCD2-205ENST00000577686 CNGB1Q14028 1251 aaPredicted RBP19.01■□□□□ 0.63
SMARCD2-205ENST00000577686 DPY19L2Q6NUT2 758 aa19.01■□□□□ 0.63
SMARCD2-205ENST00000577686 DNAJC5GQ8N7S2 189 aa19.01■□□□□ 0.63
SMARCD2-205ENST00000577686 ZNF622Q969S3 477 aaKnown RBP eCLIP19.01■□□□□ 0.63
SMARCD2-205ENST00000577686 KLRG1Q96E93 195 aa19.01■□□□□ 0.63
SMARCD2-205ENST00000577686 SETDB2Q96T68 719 aa19.01■□□□□ 0.63
SMARCD2-205ENST00000577686 VIRMAQ69YN4 1812 aaKnown RBP19.01■□□□□ 0.63
SMARCD2-205ENST00000577686 DLEC1Q9Y238 1755 aa19.01■□□□□ 0.63
SMARCD2-205ENST00000577686 AFDNP55196 1824 aaKnown RBP19■□□□□ 0.63
SMARCD2-205ENST00000577686 SOGA3Q5TF21 947 aa19■□□□□ 0.63
SMARCD2-205ENST00000577686 CNBD1Q8NA66 436 aa19■□□□□ 0.63
SMARCD2-205ENST00000577686 IL17REQ8NFR9 667 aa19■□□□□ 0.63
SMARCD2-205ENST00000577686 RTF1Q92541 710 aaKnown RBP19■□□□□ 0.63
SMARCD2-205ENST00000577686 SCN7AQ01118 1682 aa18.99■□□□□ 0.63
SMARCD2-205ENST00000577686 BTBD11A6QL63 1104 aa18.99■□□□□ 0.63
SMARCD2-205ENST00000577686 TBC1D9BQ66K14 1250 aa18.99■□□□□ 0.63
SMARCD2-205ENST00000577686 CNKSR1Q969H4 720 aa18.99■□□□□ 0.63
SMARCD2-205ENST00000577686 ZNF652Q9Y2D9 606 aa18.99■□□□□ 0.63
SMARCD2-205ENST00000577686 CEMIPQ8WUJ3 1361 aa18.98■□□□□ 0.63
SMARCD2-205ENST00000577686 PRKAR2BP31323 418 aa18.98■□□□□ 0.63
SMARCD2-205ENST00000577686 TBC1D2BQ9UPU7 963 aa18.98■□□□□ 0.63
SMARCD2-205ENST00000577686 PRR5LQ6MZQ0 368 aa18.97■□□□□ 0.63
SMARCD2-205ENST00000577686 NEFMP07197 916 aa18.96■□□□□ 0.63
SMARCD2-205ENST00000577686 DZIP3Q86Y13 1208 aaKnown RBP18.96■□□□□ 0.63
SMARCD2-205ENST00000577686 SBF1O95248 1867 aa18.95■□□□□ 0.62
SMARCD2-205ENST00000577686 ERFEQ4G0M1 354 aa18.95■□□□□ 0.62
SMARCD2-205ENST00000577686 STYK1Q6J9G0 422 aa18.95■□□□□ 0.62
SMARCD2-205ENST00000577686 TAOK3Q9H2K8 898 aa18.95■□□□□ 0.62
SMARCD2-205ENST00000577686 LTBP3Q9NS15 1303 aa18.95■□□□□ 0.62
SMARCD2-205ENST00000577686 NFKBIEO00221 500 aa18.94■□□□□ 0.62
SMARCD2-205ENST00000577686 C21orf2O43822 256 aa18.94■□□□□ 0.62
SMARCD2-205ENST00000577686 SNRPA1P09661 255 aaKnown RBP18.94■□□□□ 0.62
SMARCD2-205ENST00000577686 U2AF1L5P0DN76 240 aaPredicted RBP18.94■□□□□ 0.62
SMARCD2-205ENST00000577686 U2AF1Q01081 240 aaKnown RBP eCLIP18.94■□□□□ 0.62
SMARCD2-205ENST00000577686 CLEC4GQ6UXB4 293 aa18.94■□□□□ 0.62
SMARCD2-205ENST00000577686 JMYQ8N9B5 988 aa18.94■□□□□ 0.62
SMARCD2-205ENST00000577686 RSPH6AQ9H0K4 717 aa18.94■□□□□ 0.62
SMARCD2-205ENST00000577686 TIAM2Q8IVF5 1701 aa18.94■□□□□ 0.62
SMARCD2-205ENST00000577686 RGL2O15211 777 aa18.93■□□□□ 0.62
SMARCD2-205ENST00000577686 CAMTA2O94983 1202 aa18.93■□□□□ 0.62
SMARCD2-205ENST00000577686 A1BGP04217 495 aa18.93■□□□□ 0.62
SMARCD2-205ENST00000577686 MASTLQ96GX5 879 aa18.93■□□□□ 0.62
SMARCD2-205ENST00000577686 SIPA1L3O60292 1781 aaPredicted RBP18.93■□□□□ 0.62
SMARCD2-205ENST00000577686 HTATSF1O43719 755 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms