RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 PLPP6Q8IY26 295 aa9.52□□□□□ -0.89
CASC3-205ENST00000577605 KHSRPQ92945 711 aaKnown RBP eCLIP9.52□□□□□ -0.89
CASC3-205ENST00000577605 HS3ST6Q96QI5 342 aa9.52□□□□□ -0.89
CASC3-205ENST00000577605 PEAK1Q9H792 1746 aa9.52□□□□□ -0.89
CASC3-205ENST00000577605 HSP90AB1P08238 724 aaKnown RBP9.51□□□□□ -0.89
CASC3-205ENST00000577605 SLC27A3Q5K4L6 730 aa9.51□□□□□ -0.89
CASC3-205ENST00000577605 IGSF1Q8N6C5 1336 aa9.51□□□□□ -0.89
CASC3-205ENST00000577605 RGPD5Q99666 1765 aa9.5□□□□□ -0.89
CASC3-205ENST00000577605 SLC34A2O95436 690 aa9.5□□□□□ -0.89
CASC3-205ENST00000577605 PLEKHO1Q53GL0 409 aaPredicted RBP9.5□□□□□ -0.89
CASC3-205ENST00000577605 IFNL2Q8IZJ0 200 aa9.5□□□□□ -0.89
CASC3-205ENST00000577605 USHBP1Q8N6Y0 703 aa9.5□□□□□ -0.89
CASC3-205ENST00000577605 WNK3Q9BYP7 1800 aa9.49□□□□□ -0.89
CASC3-205ENST00000577605 ANKRD26Q9UPS8 1709 aa9.49□□□□□ -0.89
CASC3-205ENST00000577605 KCNQ2O43526 872 aa9.49□□□□□ -0.89
CASC3-205ENST00000577605 MTHFSP49914 203 aa9.49□□□□□ -0.89
CASC3-205ENST00000577605 TXNRD1Q16881 649 aa9.49□□□□□ -0.89
CASC3-205ENST00000577605 CC2D1BQ5T0F9 858 aaKnown RBP9.49□□□□□ -0.89
CASC3-205ENST00000577605 ACSBG1Q96GR2 724 aa9.49□□□□□ -0.89
CASC3-205ENST00000577605 CFAP53Q96M91 514 aa9.49□□□□□ -0.89
CASC3-205ENST00000577605 PCDHGA4Q9Y5G9 962 aa9.49□□□□□ -0.89
CASC3-205ENST00000577605 MEGF6O75095 1541 aa9.49□□□□□ -0.89
CASC3-205ENST00000577605 TNS1Q9HBL0 1735 aaKnown RBP9.48□□□□□ -0.89
CASC3-205ENST00000577605 DIAPH1O60610 1272 aaKnown RBP9.48□□□□□ -0.89
CASC3-205ENST00000577605 IL13P35225 146 aa9.48□□□□□ -0.89
CASC3-205ENST00000577605 PRIM1P49642 420 aaKnown RBP9.48□□□□□ -0.89
CASC3-205ENST00000577605 SMARCC1Q92922 1105 aaPredicted RBP9.48□□□□□ -0.89
CASC3-205ENST00000577605 STK32BQ9NY57 414 aa9.48□□□□□ -0.89
CASC3-205ENST00000577605 RGPD3A6NKT7 1758 aaPredicted RBP9.47□□□□□ -0.89
CASC3-205ENST00000577605 RGPD4Q7Z3J3 1758 aa9.47□□□□□ -0.89
CASC3-205ENST00000577605 CYP27B1O15528 508 aa9.47□□□□□ -0.89
CASC3-205ENST00000577605 NUDT7P0C024 238 aa9.47□□□□□ -0.89
CASC3-205ENST00000577605 PDE4AP27815 886 aa9.47□□□□□ -0.89
CASC3-205ENST00000577605 R3HDM1Q15032 1099 aaKnown RBP9.47□□□□□ -0.89
CASC3-205ENST00000577605 NEUROD2Q15784 382 aa9.47□□□□□ -0.89
CASC3-205ENST00000577605 VARS2Q5ST30 1063 aaKnown RBP9.47□□□□□ -0.89
CASC3-205ENST00000577605 PPP1R15BQ5SWA1 713 aa9.47□□□□□ -0.89
CASC3-205ENST00000577605 SYTL4Q96C24 671 aaPredicted RBP9.47□□□□□ -0.89
CASC3-205ENST00000577605 NUDCQ9Y266 331 aa9.47□□□□□ -0.89
CASC3-205ENST00000577605 ERVV-2B6SEH9 535 aa9.46□□□□□ -0.9
CASC3-205ENST00000577605 PHKG2P15735 406 aa9.46□□□□□ -0.9
CASC3-205ENST00000577605 C1orf141Q5JVX7 400 aa9.46□□□□□ -0.9
CASC3-205ENST00000577605 DCAF5Q96JK2 942 aa9.46□□□□□ -0.9
CASC3-205ENST00000577605 LARP6Q9BRS8 491 aaKnown RBP9.46□□□□□ -0.9
CASC3-205ENST00000577605 KDRP35968 1356 aa9.46□□□□□ -0.9
CASC3-205ENST00000577605 NHSQ6T4R5 1651 aa9.45□□□□□ -0.9
CASC3-205ENST00000577605 SLC15A2Q16348 729 aa9.45□□□□□ -0.9
CASC3-205ENST00000577605 SULT6B1Q6IMI4 303 aa9.45□□□□□ -0.9
CASC3-205ENST00000577605 PTF1AQ7RTS3 328 aa9.45□□□□□ -0.9
CASC3-205ENST00000577605 PLSCR2Q9NRY7 297 aa9.45□□□□□ -0.9
CASC3-205ENST00000577605 PSDA5PKW4 1024 aaPredicted RBP9.44□□□□□ -0.9
CASC3-205ENST00000577605 SLC16A10Q8TF71 515 aa9.44□□□□□ -0.9
CASC3-205ENST00000577605 PTCD2Q8WV60 388 aaKnown RBP9.44□□□□□ -0.9
CASC3-205ENST00000577605 DDX27Q96GQ7 796 aaKnown RBP9.44□□□□□ -0.9
CASC3-205ENST00000577605 SPON1Q9HCB6 807 aa9.44□□□□□ -0.9
CASC3-205ENST00000577605 TMOD3Q9NYL9 352 aa9.44□□□□□ -0.9
CASC3-205ENST00000577605 RREB1Q92766 1687 aa9.43□□□□□ -0.9
CASC3-205ENST00000577605 RALBP1Q15311 655 aa9.43□□□□□ -0.9
CASC3-205ENST00000577605 AKAP4Q5JQC9 854 aa9.43□□□□□ -0.9
CASC3-205ENST00000577605 ZNF530Q6P9A1 599 aaPredicted RBP9.43□□□□□ -0.9
CASC3-205ENST00000577605 MPRIPQ6WCQ1 1025 aa9.43□□□□□ -0.9
CASC3-205ENST00000577605 FLAD1Q8NFF5 587 aa9.43□□□□□ -0.9
CASC3-205ENST00000577605 EP400Q96L91 3159 aa9.42□□□□□ -0.9
CASC3-205ENST00000577605 ZNF316A6NFI3 1004 aaPredicted RBP9.42□□□□□ -0.9
CASC3-205ENST00000577605 PPP2R1AP30153 589 aa9.42□□□□□ -0.9
CASC3-205ENST00000577605 MFSD10Q14728 455 aa9.42□□□□□ -0.9
CASC3-205ENST00000577605 NPM2Q86SE8 214 aaKnown RBP9.42□□□□□ -0.9
CASC3-205ENST00000577605 KCNV2Q8TDN2 545 aa9.42□□□□□ -0.9
CASC3-205ENST00000577605 PIGBQ92521 554 aa9.42□□□□□ -0.9
CASC3-205ENST00000577605 PNNQ9H307 717 aaKnown RBP9.42□□□□□ -0.9
CASC3-205ENST00000577605 CCNL1Q9UK58 526 aaPredicted RBP9.42□□□□□ -0.9
CASC3-205ENST00000577605 MAP2P11137 1827 aaKnown RBP9.42□□□□□ -0.9
CASC3-205ENST00000577605 PALLDQ8WX93 1383 aa9.41□□□□□ -0.9
CASC3-205ENST00000577605 SBF2Q86WG5 1849 aa9.41□□□□□ -0.9
CASC3-205ENST00000577605 U2SURPO15042 1029 aaKnown RBP9.41□□□□□ -0.9
CASC3-205ENST00000577605 FCHSD2O94868 740 aa9.41□□□□□ -0.9
CASC3-205ENST00000577605 CABP4P57796 275 aa9.41□□□□□ -0.9
CASC3-205ENST00000577605 GAS2L2Q8NHY3 880 aa9.41□□□□□ -0.9
CASC3-205ENST00000577605 ZC3H15Q8WU90 426 aaKnown RBP9.41□□□□□ -0.9
CASC3-205ENST00000577605 WDR70Q9NW82 654 aa9.41□□□□□ -0.9
CASC3-205ENST00000577605 PKD1L3Q7Z443 1732 aa9.41□□□□□ -0.9
CASC3-205ENST00000577605 NEFMP07197 916 aa9.4□□□□□ -0.9
CASC3-205ENST00000577605 AEBP1Q8IUX7 1158 aa9.4□□□□□ -0.9
CASC3-205ENST00000577605 KRTAP3-3Q9BYR6 98 aa9.4□□□□□ -0.9
CASC3-205ENST00000577605 KRTAP3-2Q9BYR7 98 aa9.4□□□□□ -0.9
CASC3-205ENST00000577605 MTFR1LQ9H019 292 aa9.4□□□□□ -0.9
CASC3-205ENST00000577605 ANO8Q9HCE9 1232 aaPredicted RBP9.4□□□□□ -0.9
CASC3-205ENST00000577605 LRRC4BQ9NT99 713 aa9.4□□□□□ -0.9
CASC3-205ENST00000577605 TFCP2L1Q9NZI6 479 aa9.4□□□□□ -0.9
CASC3-205ENST00000577605 LHX6Q9UPM6 363 aa9.4□□□□□ -0.9
CASC3-205ENST00000577605 NUP188Q5SRE5 1749 aa9.39□□□□□ -0.91
CASC3-205ENST00000577605 LRP5O75197 1615 aa9.39□□□□□ -0.91
CASC3-205ENST00000577605 OXER1Q8TDS5 423 aa9.39□□□□□ -0.91
CASC3-205ENST00000577605 RGPD2P0DJD1 1756 aa9.38□□□□□ -0.91
CASC3-205ENST00000577605 LOC102724428A0A0B4J2F2 783 aa9.38□□□□□ -0.91
CASC3-205ENST00000577605 HMOX1P09601 288 aa9.38□□□□□ -0.91
CASC3-205ENST00000577605 SIK1P57059 783 aa9.38□□□□□ -0.91
CASC3-205ENST00000577605 CNGB1Q14028 1251 aaPredicted RBP9.38□□□□□ -0.91
CASC3-205ENST00000577605 ZMYND15Q9H091 742 aa9.38□□□□□ -0.91
CASC3-205ENST00000577605 ATG3Q9NT62 314 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms