RNA–Protein interactions for RNA: ENST00000577422.5

CUEDC1-203, Transcript of CUE domain containing 1, humanhuman

TSL 3

Gene CUEDC1, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-203ENST00000577422 VSIG10Q8N0Z9 540 aa18.36■□□□□ 0.53
CUEDC1-203ENST00000577422 FCHSD2O94868 740 aa18.35■□□□□ 0.53
CUEDC1-203ENST00000577422 IL17REQ8NFR9 667 aa18.35■□□□□ 0.53
CUEDC1-203ENST00000577422 NARFQ9UHQ1 456 aa18.35■□□□□ 0.53
CUEDC1-203ENST00000577422 CHRNA5P30532 468 aa18.34■□□□□ 0.53
CUEDC1-203ENST00000577422 NFIXQ14938 502 aa18.33■□□□□ 0.52
CUEDC1-203ENST00000577422 ARHGAP27Q6ZUM4 889 aa18.33■□□□□ 0.52
CUEDC1-203ENST00000577422 PIM2Q9P1W9 311 aa18.33■□□□□ 0.52
CUEDC1-203ENST00000577422 CEMIPQ8WUJ3 1361 aa18.32■□□□□ 0.52
CUEDC1-203ENST00000577422 ZPR1O75312 459 aa18.32■□□□□ 0.52
CUEDC1-203ENST00000577422 HSPA6P17066 643 aa18.32■□□□□ 0.52
CUEDC1-203ENST00000577422 EIF5P55010 431 aaKnown RBP18.31■□□□□ 0.52
CUEDC1-203ENST00000577422 ZNF496Q96IT1 587 aaPredicted RBP18.31■□□□□ 0.52
CUEDC1-203ENST00000577422 PHACTR3Q96KR7 559 aa18.31■□□□□ 0.52
CUEDC1-203ENST00000577422 DLEC1Q9Y238 1755 aa18.31■□□□□ 0.52
CUEDC1-203ENST00000577422 U2SURPO15042 1029 aaKnown RBP18.3■□□□□ 0.52
CUEDC1-203ENST00000577422 CNGB1Q14028 1251 aaPredicted RBP18.3■□□□□ 0.52
CUEDC1-203ENST00000577422 DALRD3Q5D0E6 543 aaKnown RBP18.3■□□□□ 0.52
CUEDC1-203ENST00000577422 ZNF790Q6PG37 636 aa18.3■□□□□ 0.52
CUEDC1-203ENST00000577422 RSPH6AQ9H0K4 717 aa18.3■□□□□ 0.52
CUEDC1-203ENST00000577422 CARMIL3Q8ND23 1372 aa18.3■□□□□ 0.52
CUEDC1-203ENST00000577422 HEG1Q9ULI3 1381 aa18.3■□□□□ 0.52
CUEDC1-203ENST00000577422 SBF1O95248 1867 aa18.29■□□□□ 0.52
CUEDC1-203ENST00000577422 SCN7AQ01118 1682 aa18.29■□□□□ 0.52
CUEDC1-203ENST00000577422 GNAT3A8MTJ3 354 aa18.29■□□□□ 0.52
CUEDC1-203ENST00000577422 C9orf131Q5VYM1 1079 aa18.29■□□□□ 0.52
CUEDC1-203ENST00000577422 GAS2L2Q8NHY3 880 aa18.29■□□□□ 0.52
CUEDC1-203ENST00000577422 CANXP27824 592 aaKnown RBP18.28■□□□□ 0.52
CUEDC1-203ENST00000577422 NMRK2Q9NPI5 230 aa18.28■□□□□ 0.52
CUEDC1-203ENST00000577422 KCNQ3O43525 872 aa18.26■□□□□ 0.51
CUEDC1-203ENST00000577422 SERPINB2P05120 415 aa18.26■□□□□ 0.51
CUEDC1-203ENST00000577422 PRELPP51888 382 aa18.26■□□□□ 0.51
CUEDC1-203ENST00000577422 TTC5Q8N0Z6 440 aa18.26■□□□□ 0.51
CUEDC1-203ENST00000577422 ANKRD31Q8N7Z5 1873 aa18.26■□□□□ 0.51
CUEDC1-203ENST00000577422 STARD3NLO95772 234 aa18.25■□□□□ 0.51
CUEDC1-203ENST00000577422 PRKAR2BP31323 418 aa18.25■□□□□ 0.51
CUEDC1-203ENST00000577422 TEFQ10587 303 aa18.25■□□□□ 0.51
CUEDC1-203ENST00000577422 PCNTO95613 3336 aa18.25■□□□□ 0.51
CUEDC1-203ENST00000577422 TOMM70O94826 608 aa18.24■□□□□ 0.51
CUEDC1-203ENST00000577422 PPP2R1AP30153 589 aa18.24■□□□□ 0.51
CUEDC1-203ENST00000577422 TBC1D9BQ66K14 1250 aa18.23■□□□□ 0.51
CUEDC1-203ENST00000577422 COL11A2P13942 1736 aaPredicted RBP18.23■□□□□ 0.51
CUEDC1-203ENST00000577422 BCORQ6W2J9 1755 aa18.22■□□□□ 0.51
CUEDC1-203ENST00000577422 IL6STP40189 918 aaPredicted RBP18.22■□□□□ 0.51
CUEDC1-203ENST00000577422 RASSF7Q02833 373 aa18.22■□□□□ 0.51
CUEDC1-203ENST00000577422 TEX13AQ9BXU3 409 aaPredicted RBP18.22■□□□□ 0.51
CUEDC1-203ENST00000577422 RNF181Q9P0P0 153 aa18.22■□□□□ 0.51
CUEDC1-203ENST00000577422 PRAMEF22A3QJZ6 481 aa18.21■□□□□ 0.51
CUEDC1-203ENST00000577422 A1BGP04217 495 aa18.21■□□□□ 0.51
CUEDC1-203ENST00000577422 FMNL2Q96PY5 1086 aa18.21■□□□□ 0.51
CUEDC1-203ENST00000577422 TBC1D2BQ9UPU7 963 aa18.21■□□□□ 0.51
CUEDC1-203ENST00000577422 A0A087WZG4 1122 aa18.2■□□□□ 0.5
CUEDC1-203ENST00000577422 BTBD11A6QL63 1104 aa18.2■□□□□ 0.5
CUEDC1-203ENST00000577422 CAMTA2O94983 1202 aa18.2■□□□□ 0.5
CUEDC1-203ENST00000577422 BICDL1Q6ZP65 573 aa18.2■□□□□ 0.5
CUEDC1-203ENST00000577422 TNRC6CQ9HCJ0 1690 aaKnown RBP18.19■□□□□ 0.5
CUEDC1-203ENST00000577422 PRR5LQ6MZQ0 368 aa18.19■□□□□ 0.5
CUEDC1-203ENST00000577422 C2CD5Q86YS7 1000 aa18.19■□□□□ 0.5
CUEDC1-203ENST00000577422 DNAJC5GQ8N7S2 189 aa18.19■□□□□ 0.5
CUEDC1-203ENST00000577422 CFAP53Q96M91 514 aa18.19■□□□□ 0.5
CUEDC1-203ENST00000577422 USP16Q9Y5T5 823 aa18.19■□□□□ 0.5
CUEDC1-203ENST00000577422 NFKBIEO00221 500 aa18.18■□□□□ 0.5
CUEDC1-203ENST00000577422 MCM10Q7L590 875 aa18.18■□□□□ 0.5
CUEDC1-203ENST00000577422 TTLL6Q8N841 843 aa18.18■□□□□ 0.5
CUEDC1-203ENST00000577422 RBM46Q8TBY0 533 aaKnown RBP18.18■□□□□ 0.5
CUEDC1-203ENST00000577422 U2AF1L5P0DN76 240 aaPredicted RBP18.17■□□□□ 0.5
CUEDC1-203ENST00000577422 APLP1P51693 650 aa18.17■□□□□ 0.5
CUEDC1-203ENST00000577422 U2AF1Q01081 240 aaKnown RBP eCLIP18.17■□□□□ 0.5
CUEDC1-203ENST00000577422 CCDC24Q8N4L8 307 aa18.17■□□□□ 0.5
CUEDC1-203ENST00000577422 TIAM2Q8IVF5 1701 aa18.17■□□□□ 0.5
CUEDC1-203ENST00000577422 WDR90Q96KV7 1748 aa18.16■□□□□ 0.5
CUEDC1-203ENST00000577422 H0YIN7 160 aa18.16■□□□□ 0.5
CUEDC1-203ENST00000577422 PIP4K2AP48426 406 aaPredicted RBP18.16■□□□□ 0.5
CUEDC1-203ENST00000577422 DCTN1Q14203 1278 aa18.16■□□□□ 0.5
CUEDC1-203ENST00000577422 BRIP1Q9BX63 1249 aa18.16■□□□□ 0.5
CUEDC1-203ENST00000577422 ZC3H4Q9UPT8 1303 aaKnown RBP18.16■□□□□ 0.5
CUEDC1-203ENST00000577422 LMNB1P20700 586 aa18.15■□□□□ 0.5
CUEDC1-203ENST00000577422 RRAGCQ9HB90 399 aa18.15■□□□□ 0.5
CUEDC1-203ENST00000577422 NUDCQ9Y266 331 aa18.15■□□□□ 0.5
CUEDC1-203ENST00000577422 ZNF330Q9Y3S2 320 aaPredicted RBP18.15■□□□□ 0.5
CUEDC1-203ENST00000577422 FER1L6Q2WGJ9 1857 aa18.15■□□□□ 0.5
CUEDC1-203ENST00000577422 KDM2BQ8NHM5 1336 aa18.15■□□□□ 0.5
CUEDC1-203ENST00000577422 CCDC88AQ3V6T2 1871 aa18.14■□□□□ 0.49
CUEDC1-203ENST00000577422 NBPF26B4DH59 902 aa18.13■□□□□ 0.49
CUEDC1-203ENST00000577422 NBPF10Q6P3W6 841 aaKnown RBP18.13■□□□□ 0.49
CUEDC1-203ENST00000577422 DZIP3Q86Y13 1208 aaKnown RBP18.13■□□□□ 0.49
CUEDC1-203ENST00000577422 NBPF15Q8N660 670 aa18.13■□□□□ 0.49
CUEDC1-203ENST00000577422 ARFGEF2Q9Y6D5 1785 aa18.12■□□□□ 0.49
CUEDC1-203ENST00000577422 DLG5Q8TDM6 1919 aa18.12■□□□□ 0.49
CUEDC1-203ENST00000577422 GLTPD2A6NH11 291 aa18.12■□□□□ 0.49
CUEDC1-203ENST00000577422 HTATSF1O43719 755 aaKnown RBP18.12■□□□□ 0.49
CUEDC1-203ENST00000577422 PDE6BP35913 854 aa18.12■□□□□ 0.49
CUEDC1-203ENST00000577422 SLX4Q8IY92 1834 aa18.12■□□□□ 0.49
CUEDC1-203ENST00000577422 POTECB2RU33 542 aa18.11■□□□□ 0.49
CUEDC1-203ENST00000577422 SNRPA1P09661 255 aaKnown RBP18.11■□□□□ 0.49
CUEDC1-203ENST00000577422 HTRA3P83110 453 aa18.11■□□□□ 0.49
CUEDC1-203ENST00000577422 FSTL1Q12841 308 aa18.11■□□□□ 0.49
CUEDC1-203ENST00000577422 IFFO2Q5TF58 517 aa18.11■□□□□ 0.49
CUEDC1-203ENST00000577422 PLEKHF1Q96S99 279 aa18.11■□□□□ 0.49
CUEDC1-203ENST00000577422 SETDB2Q96T68 719 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms