RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 CARMIL3Q8ND23 1372 aa16.35■□□□□ 0.21
PRPF8-215ENST00000576958 DIAPH1O60610 1272 aaKnown RBP16.34■□□□□ 0.21
PRPF8-215ENST00000576958 HSPA6P17066 643 aa16.34■□□□□ 0.21
PRPF8-215ENST00000576958 NFIXQ14938 502 aa16.34■□□□□ 0.21
PRPF8-215ENST00000576958 C9orf131Q5VYM1 1079 aa16.34■□□□□ 0.21
PRPF8-215ENST00000576958 PRELPP51888 382 aa16.33■□□□□ 0.2
PRPF8-215ENST00000576958 RASSF7Q02833 373 aa16.33■□□□□ 0.2
PRPF8-215ENST00000576958 CCDC24Q8N4L8 307 aa16.33■□□□□ 0.2
PRPF8-215ENST00000576958 COL15A1P39059 1388 aa16.33■□□□□ 0.2
PRPF8-215ENST00000576958 KCNQ3O43525 872 aa16.32■□□□□ 0.2
PRPF8-215ENST00000576958 CANXP27824 592 aaKnown RBP16.32■□□□□ 0.2
PRPF8-215ENST00000576958 HTRA3P83110 453 aa16.32■□□□□ 0.2
PRPF8-215ENST00000576958 IL17REQ8NFR9 667 aa16.32■□□□□ 0.2
PRPF8-215ENST00000576958 SIPA1L3O60292 1781 aaPredicted RBP16.31■□□□□ 0.2
PRPF8-215ENST00000576958 NRXN2Q9P2S2 1712 aa16.31■□□□□ 0.2
PRPF8-215ENST00000576958 U2SURPO15042 1029 aaKnown RBP16.31■□□□□ 0.2
PRPF8-215ENST00000576958 BICDL1Q6ZP65 573 aa16.31■□□□□ 0.2
PRPF8-215ENST00000576958 PIM2Q9P1W9 311 aa16.31■□□□□ 0.2
PRPF8-215ENST00000576958 ZNF496Q96IT1 587 aaPredicted RBP16.3■□□□□ 0.2
PRPF8-215ENST00000576958 PHACTR3Q96KR7 559 aa16.3■□□□□ 0.2
PRPF8-215ENST00000576958 SBF1O95248 1867 aa16.3■□□□□ 0.2
PRPF8-215ENST00000576958 ZPR1O75312 459 aa16.29■□□□□ 0.2
PRPF8-215ENST00000576958 PIP4K2AP48426 406 aaPredicted RBP16.29■□□□□ 0.2
PRPF8-215ENST00000576958 DALRD3Q5D0E6 543 aaKnown RBP16.29■□□□□ 0.2
PRPF8-215ENST00000576958 NARFQ9UHQ1 456 aa16.29■□□□□ 0.2
PRPF8-215ENST00000576958 ANKRD31Q8N7Z5 1873 aa16.29■□□□□ 0.2
PRPF8-215ENST00000576958 PRAMEF22A3QJZ6 481 aa16.28■□□□□ 0.2
PRPF8-215ENST00000576958 RNF181Q9P0P0 153 aa16.28■□□□□ 0.2
PRPF8-215ENST00000576958 SERPINB2P05120 415 aa16.27■□□□□ 0.2
PRPF8-215ENST00000576958 ZNF330Q9Y3S2 320 aaPredicted RBP16.27■□□□□ 0.2
PRPF8-215ENST00000576958 DLEC1Q9Y238 1755 aa16.27■□□□□ 0.2
PRPF8-215ENST00000576958 COL11A2P13942 1736 aaPredicted RBP16.27■□□□□ 0.19
PRPF8-215ENST00000576958 TBC1D9BQ66K14 1250 aa16.26■□□□□ 0.19
PRPF8-215ENST00000576958 TBC1D2BQ9UPU7 963 aa16.26■□□□□ 0.19
PRPF8-215ENST00000576958 SCN7AQ01118 1682 aa16.25■□□□□ 0.19
PRPF8-215ENST00000576958 A1BGP04217 495 aa16.25■□□□□ 0.19
PRPF8-215ENST00000576958 EIF5P55010 431 aaKnown RBP16.25■□□□□ 0.19
PRPF8-215ENST00000576958 PRKAR2BP31323 418 aa16.24■□□□□ 0.19
PRPF8-215ENST00000576958 ZNF790Q6PG37 636 aa16.24■□□□□ 0.19
PRPF8-215ENST00000576958 RSPH6AQ9H0K4 717 aa16.24■□□□□ 0.19
PRPF8-215ENST00000576958 RRAGCQ9HB90 399 aa16.24■□□□□ 0.19
PRPF8-215ENST00000576958 ZNF219Q9P2Y4 722 aaPredicted RBP16.24■□□□□ 0.19
PRPF8-215ENST00000576958 HEG1Q9ULI3 1381 aa16.24■□□□□ 0.19
PRPF8-215ENST00000576958 GNAT3A8MTJ3 354 aa16.23■□□□□ 0.19
PRPF8-215ENST00000576958 TOMM70O94826 608 aa16.23■□□□□ 0.19
PRPF8-215ENST00000576958 C2CD5Q86YS7 1000 aa16.23■□□□□ 0.19
PRPF8-215ENST00000576958 VSIG10Q8N0Z9 540 aa16.23■□□□□ 0.19
PRPF8-215ENST00000576958 NPC1L1Q9UHC9 1359 aa16.23■□□□□ 0.19
PRPF8-215ENST00000576958 CCDC88AQ3V6T2 1871 aa16.22■□□□□ 0.19
PRPF8-215ENST00000576958 DCTN1Q14203 1278 aa16.22■□□□□ 0.19
PRPF8-215ENST00000576958 MCM10Q7L590 875 aa16.22■□□□□ 0.19
PRPF8-215ENST00000576958 TTC5Q8N0Z6 440 aa16.22■□□□□ 0.19
PRPF8-215ENST00000576958 DNAJC5GQ8N7S2 189 aa16.22■□□□□ 0.19
PRPF8-215ENST00000576958 TIAM2Q8IVF5 1701 aa16.22■□□□□ 0.19
PRPF8-215ENST00000576958 WDR90Q96KV7 1748 aa16.22■□□□□ 0.19
PRPF8-215ENST00000576958 NFKBIEO00221 500 aa16.21■□□□□ 0.19
PRPF8-215ENST00000576958 TEFQ10587 303 aa16.21■□□□□ 0.19
PRPF8-215ENST00000576958 CEMIPQ8WUJ3 1361 aa16.21■□□□□ 0.19
PRPF8-215ENST00000576958 CACNA1SQ13698 1873 aa16.2■□□□□ 0.18
PRPF8-215ENST00000576958 IFFO2Q5TF58 517 aa16.2■□□□□ 0.18
PRPF8-215ENST00000576958 PRR5LQ6MZQ0 368 aa16.2■□□□□ 0.18
PRPF8-215ENST00000576958 USP16Q9Y5T5 823 aa16.2■□□□□ 0.18
PRPF8-215ENST00000576958 BCORQ6W2J9 1755 aa16.19■□□□□ 0.18
PRPF8-215ENST00000576958 CAMTA2O94983 1202 aa16.19■□□□□ 0.18
PRPF8-215ENST00000576958 PPP2R1AP30153 589 aa16.19■□□□□ 0.18
PRPF8-215ENST00000576958 GAS2L2Q8NHY3 880 aa16.19■□□□□ 0.18
PRPF8-215ENST00000576958 TNRC6CQ9HCJ0 1690 aaKnown RBP16.18■□□□□ 0.18
PRPF8-215ENST00000576958 BTBD11A6QL63 1104 aa16.18■□□□□ 0.18
PRPF8-215ENST00000576958 STARD3NLO95772 234 aa16.18■□□□□ 0.18
PRPF8-215ENST00000576958 PCNTO95613 3336 aa16.18■□□□□ 0.18
PRPF8-215ENST00000576958 SLX4Q8IY92 1834 aa16.17■□□□□ 0.18
PRPF8-215ENST00000576958 C21orf2O43822 256 aa16.17■□□□□ 0.18
PRPF8-215ENST00000576958 APLP1P51693 650 aa16.17■□□□□ 0.18
PRPF8-215ENST00000576958 TTLL6Q8N841 843 aa16.17■□□□□ 0.18
PRPF8-215ENST00000576958 RBM46Q8TBY0 533 aaKnown RBP16.17■□□□□ 0.18
PRPF8-215ENST00000576958 ZNF622Q969S3 477 aaKnown RBP eCLIP16.17■□□□□ 0.183e-12■□□□□ 9.3
PRPF8-215ENST00000576958 MIS18AQ9NYP9 233 aa16.17■□□□□ 0.18
PRPF8-215ENST00000576958 U2AF1L5P0DN76 240 aaPredicted RBP16.16■□□□□ 0.18
PRPF8-215ENST00000576958 U2AF1Q01081 240 aaKnown RBP eCLIP16.16■□□□□ 0.18
PRPF8-215ENST00000576958 FMNL2Q96PY5 1086 aa16.16■□□□□ 0.18
PRPF8-215ENST00000576958 POTECB2RU33 542 aa16.15■□□□□ 0.18
PRPF8-215ENST00000576958 NBPF26B4DH59 902 aa16.15■□□□□ 0.18
PRPF8-215ENST00000576958 H0YIN7 160 aa16.15■□□□□ 0.18
PRPF8-215ENST00000576958 IL6STP40189 918 aaPredicted RBP16.15■□□□□ 0.18
PRPF8-215ENST00000576958 NBPF10Q6P3W6 841 aaKnown RBP16.15■□□□□ 0.18
PRPF8-215ENST00000576958 OLFM4Q6UX06 510 aa16.15■□□□□ 0.18
PRPF8-215ENST00000576958 SLC51AQ86UW1 340 aa16.15■□□□□ 0.18
PRPF8-215ENST00000576958 NBPF15Q8N660 670 aa16.15■□□□□ 0.18
PRPF8-215ENST00000576958 FER1L6Q2WGJ9 1857 aa16.14■□□□□ 0.17
PRPF8-215ENST00000576958 LMNB1P20700 586 aa16.14■□□□□ 0.17
PRPF8-215ENST00000576958 DZIP3Q86Y13 1208 aaKnown RBP16.14■□□□□ 0.17
PRPF8-215ENST00000576958 C16orf71Q8IYS4 520 aaPredicted RBP16.14■□□□□ 0.17
PRPF8-215ENST00000576958 KDM2BQ8NHM5 1336 aa16.14■□□□□ 0.17
PRPF8-215ENST00000576958 A0A087WZG4 1122 aa16.13■□□□□ 0.17
PRPF8-215ENST00000576958 FAM177BA6PVY3 158 aa16.12■□□□□ 0.17
PRPF8-215ENST00000576958 THUMPD2Q9BTF0 503 aaKnown RBP16.12■□□□□ 0.17
PRPF8-215ENST00000576958 BRIP1Q9BX63 1249 aa16.12■□□□□ 0.17
PRPF8-215ENST00000576958 DLG5Q8TDM6 1919 aa16.11■□□□□ 0.17
PRPF8-215ENST00000576958 GLTPD2A6NH11 291 aa16.11■□□□□ 0.17
PRPF8-215ENST00000576958 POTEIP0CG38 1075 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms