RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 HSPA1BP0DMV9 641 aaKnown RBP13.88□□□□□ -0.19
NPLOC4-220ENST00000576940 LMNB1P20700 586 aa13.88□□□□□ -0.19
NPLOC4-220ENST00000576940 BCL2L12Q9HB09 334 aa13.88□□□□□ -0.19
NPLOC4-220ENST00000576940 NARFQ9UHQ1 456 aa13.88□□□□□ -0.19
NPLOC4-220ENST00000576940 SOS1Q07889 1333 aaPredicted RBP13.88□□□□□ -0.19
NPLOC4-220ENST00000576940 POTECB2RU33 542 aa13.87□□□□□ -0.19
NPLOC4-220ENST00000576940 CYP19A1P11511 503 aaPredicted RBP13.87□□□□□ -0.19
NPLOC4-220ENST00000576940 TTLL6Q8N841 843 aa13.87□□□□□ -0.19
NPLOC4-220ENST00000576940 TJP1Q07157 1748 aa13.87□□□□□ -0.19
NPLOC4-220ENST00000576940 IL13P35225 146 aa13.86□□□□□ -0.19
NPLOC4-220ENST00000576940 MORC1Q86VD1 984 aa13.86□□□□□ -0.19
NPLOC4-220ENST00000576940 C2CD5Q86YS7 1000 aa13.86□□□□□ -0.19
NPLOC4-220ENST00000576940 SLC52A2Q9HAB3 445 aa13.86□□□□□ -0.19
NPLOC4-220ENST00000576940 ZBTB1Q9Y2K1 713 aa13.86□□□□□ -0.19
NPLOC4-220ENST00000576940 TNRC6CQ9HCJ0 1690 aaKnown RBP13.85□□□□□ -0.19
NPLOC4-220ENST00000576940 ADAMTS7Q9UKP4 1686 aa13.85□□□□□ -0.19
NPLOC4-220ENST00000576940 AKAP4Q5JQC9 854 aa13.85□□□□□ -0.19
NPLOC4-220ENST00000576940 BICDL1Q6ZP65 573 aa13.85□□□□□ -0.19
NPLOC4-220ENST00000576940 ZC3H4Q9UPT8 1303 aaKnown RBP13.85□□□□□ -0.19
NPLOC4-220ENST00000576940 H0YIN7 160 aa13.84□□□□□ -0.19
NPLOC4-220ENST00000576940 NFKBIEO00221 500 aa13.84□□□□□ -0.19
NPLOC4-220ENST00000576940 CANXP27824 592 aaKnown RBP13.84□□□□□ -0.19
NPLOC4-220ENST00000576940 ZNF219Q9P2Y4 722 aaPredicted RBP13.84□□□□□ -0.19
NPLOC4-220ENST00000576940 AFDNP55196 1824 aaKnown RBP13.84□□□□□ -0.19
NPLOC4-220ENST00000576940 CCDC88AQ3V6T2 1871 aa13.83□□□□□ -0.2
NPLOC4-220ENST00000576940 RNMTO43148 476 aaKnown RBP13.83□□□□□ -0.2
NPLOC4-220ENST00000576940 CCDC24Q8N4L8 307 aa13.83□□□□□ -0.2
NPLOC4-220ENST00000576940 COL15A1P39059 1388 aa13.83□□□□□ -0.2
NPLOC4-220ENST00000576940 CARMIL3Q8ND23 1372 aa13.83□□□□□ -0.2
NPLOC4-220ENST00000576940 DPY19L2Q6NUT2 758 aa13.82□□□□□ -0.2
NPLOC4-220ENST00000576940 ZNF622Q969S3 477 aaKnown RBP eCLIP13.82□□□□□ -0.24e-14■□□□□ 10.9
NPLOC4-220ENST00000576940 SCN11AQ9UI33 1791 aa13.81□□□□□ -0.2
NPLOC4-220ENST00000576940 C21orf2O43822 256 aa13.81□□□□□ -0.2
NPLOC4-220ENST00000576940 HMOX1P09601 288 aa13.81□□□□□ -0.2
NPLOC4-220ENST00000576940 MTHFSDQ2M296 383 aaKnown RBP13.8□□□□□ -0.2
NPLOC4-220ENST00000576940 ERFEQ4G0M1 354 aa13.8□□□□□ -0.2
NPLOC4-220ENST00000576940 TBC1D9BQ66K14 1250 aa13.8□□□□□ -0.2
NPLOC4-220ENST00000576940 MKRN1Q9UHC7 482 aaKnown RBP13.8□□□□□ -0.2
NPLOC4-220ENST00000576940 NRXN2Q9P2S2 1712 aa13.79□□□□□ -0.2
NPLOC4-220ENST00000576940 POTEIP0CG38 1075 aa13.79□□□□□ -0.2
NPLOC4-220ENST00000576940 POTEJP0CG39 1038 aa13.79□□□□□ -0.2
NPLOC4-220ENST00000576940 HSPA5P11021 654 aaKnown RBP13.79□□□□□ -0.2
NPLOC4-220ENST00000576940 EIF5P55010 431 aaKnown RBP13.79□□□□□ -0.2
NPLOC4-220ENST00000576940 VSIG10Q8N0Z9 540 aa13.79□□□□□ -0.2
NPLOC4-220ENST00000576940 TIMELESSQ9UNS1 1208 aa13.79□□□□□ -0.2
NPLOC4-220ENST00000576940 DDNO94850 711 aaPredicted RBP13.78□□□□□ -0.2
NPLOC4-220ENST00000576940 TBC1D2BQ9UPU7 963 aa13.78□□□□□ -0.2
NPLOC4-220ENST00000576940 PDE6BP35913 854 aa13.77□□□□□ -0.21
NPLOC4-220ENST00000576940 EIF4G2P78344 907 aaKnown RBP eCLIP13.77□□□□□ -0.21
NPLOC4-220ENST00000576940 PRR5LQ6MZQ0 368 aa13.77□□□□□ -0.21
NPLOC4-220ENST00000576940 CHADLQ6NUI6 762 aa13.77□□□□□ -0.21
NPLOC4-220ENST00000576940 BRIP1Q9BX63 1249 aa13.77□□□□□ -0.21
NPLOC4-220ENST00000576940 ZNF330Q9Y3S2 320 aaPredicted RBP13.77□□□□□ -0.21
NPLOC4-220ENST00000576940 KNSTRNQ9Y448 316 aa13.77□□□□□ -0.21
NPLOC4-220ENST00000576940 A0A087WZG4 1122 aa13.76□□□□□ -0.21
NPLOC4-220ENST00000576940 STARD3NLO95772 234 aa13.76□□□□□ -0.21
NPLOC4-220ENST00000576940 CREBZFQ9NS37 354 aa13.76□□□□□ -0.21
NPLOC4-220ENST00000576940 DLEC1Q9Y238 1755 aa13.76□□□□□ -0.21
NPLOC4-220ENST00000576940 TIAM2Q8IVF5 1701 aa13.76□□□□□ -0.21
NPLOC4-220ENST00000576940 TTC5Q8N0Z6 440 aa13.75□□□□□ -0.21
NPLOC4-220ENST00000576940 FOXN1O15353 648 aa13.74□□□□□ -0.21
NPLOC4-220ENST00000576940 ZNF496Q96IT1 587 aaPredicted RBP13.74□□□□□ -0.21
NPLOC4-220ENST00000576940 TAOK3Q9H2K8 898 aa13.74□□□□□ -0.21
NPLOC4-220ENST00000576940 PDZRN3Q9UPQ7 1066 aa13.74□□□□□ -0.21
NPLOC4-220ENST00000576940 A1BGP04217 495 aa13.73□□□□□ -0.21
NPLOC4-220ENST00000576940 TRIM26Q12899 539 aaPredicted RBP13.73□□□□□ -0.21
NPLOC4-220ENST00000576940 AMER1Q5JTC6 1135 aaPredicted RBP13.73□□□□□ -0.21
NPLOC4-220ENST00000576940 IL17REQ8NFR9 667 aa13.73□□□□□ -0.21
NPLOC4-220ENST00000576940 ANKRD31Q8N7Z5 1873 aa13.73□□□□□ -0.21
NPLOC4-220ENST00000576940 MRC1P22897 1456 aa13.73□□□□□ -0.21
NPLOC4-220ENST00000576940 ZNF790Q6PG37 636 aa13.72□□□□□ -0.21
NPLOC4-220ENST00000576940 CNKSR1Q969H4 720 aa13.72□□□□□ -0.21
NPLOC4-220ENST00000576940 SETDB2Q96T68 719 aa13.72□□□□□ -0.21
NPLOC4-220ENST00000576940 FER1L6Q2WGJ9 1857 aa13.72□□□□□ -0.21
NPLOC4-220ENST00000576940 VIRMAQ69YN4 1812 aaKnown RBP13.71□□□□□ -0.21
NPLOC4-220ENST00000576940 LTBP3Q9NS15 1303 aa13.71□□□□□ -0.21
NPLOC4-220ENST00000576940 DICER1Q9UPY3 1922 aaKnown RBP13.71□□□□□ -0.21
NPLOC4-220ENST00000576940 NPHP1O15259 732 aa13.71□□□□□ -0.21
NPLOC4-220ENST00000576940 DIAPH1O60610 1272 aaKnown RBP13.71□□□□□ -0.21
NPLOC4-220ENST00000576940 SRGNP10124 158 aa13.71□□□□□ -0.21
NPLOC4-220ENST00000576940 IL6STP40189 918 aaPredicted RBP13.71□□□□□ -0.21
NPLOC4-220ENST00000576940 PRPF40BQ6NWY9 871 aaKnown RBP13.71□□□□□ -0.21
NPLOC4-220ENST00000576940 PCGF6Q9BYE7 350 aa13.71□□□□□ -0.21
NPLOC4-220ENST00000576940 SLX4Q8IY92 1834 aa13.71□□□□□ -0.22
NPLOC4-220ENST00000576940 HEG1Q9ULI3 1381 aa13.71□□□□□ -0.22
NPLOC4-220ENST00000576940 PASKQ96RG2 1323 aa13.7□□□□□ -0.22
NPLOC4-220ENST00000576940 KCNQ3O43525 872 aa13.7□□□□□ -0.22
NPLOC4-220ENST00000576940 CAMTA2O94983 1202 aa13.7□□□□□ -0.22
NPLOC4-220ENST00000576940 PIP4K2AP48426 406 aaPredicted RBP13.7□□□□□ -0.22
NPLOC4-220ENST00000576940 VEGFBP49765 207 aa13.7□□□□□ -0.22
NPLOC4-220ENST00000576940 TEFQ10587 303 aa13.7□□□□□ -0.22
NPLOC4-220ENST00000576940 STYK1Q6J9G0 422 aa13.7□□□□□ -0.22
NPLOC4-220ENST00000576940 CNBD1Q8NA66 436 aa13.7□□□□□ -0.22
NPLOC4-220ENST00000576940 MASTLQ96GX5 879 aa13.7□□□□□ -0.22
NPLOC4-220ENST00000576940 TEX13AQ9BXU3 409 aaPredicted RBP13.7□□□□□ -0.22
NPLOC4-220ENST00000576940 TAF1DQ9H5J8 278 aaPredicted RBP13.7□□□□□ -0.22
NPLOC4-220ENST00000576940 CNTNAP1P78357 1384 aa13.7□□□□□ -0.22
NPLOC4-220ENST00000576940 ITGBL1O95965 494 aaPredicted RBP13.69□□□□□ -0.22
NPLOC4-220ENST00000576940 ST5P78524 1137 aa13.69□□□□□ -0.22
NPLOC4-220ENST00000576940 LDHDQ86WU2 507 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms