RNA–Protein interactions for RNA: ENST00000576462.1

SLC12A4-217, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2

Gene SLC12A4, Length 673 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-217ENST00000576462 RNF181Q9P0P0 153 aa26.91■■□□□ 1.9
SLC12A4-217ENST00000576462 MRC1P22897 1456 aa26.91■■□□□ 1.9
SLC12A4-217ENST00000576462 ZBTB1Q9Y2K1 713 aa26.9■■□□□ 1.9
SLC12A4-217ENST00000576462 COL15A1P39059 1388 aa26.89■■□□□ 1.9
SLC12A4-217ENST00000576462 NFIXQ14938 502 aa26.89■■□□□ 1.9
SLC12A4-217ENST00000576462 NARFQ9UHQ1 456 aa26.89■■□□□ 1.9
SLC12A4-217ENST00000576462 KCPQ6ZWJ8 1503 aa26.89■■□□□ 1.89
SLC12A4-217ENST00000576462 C16orf71Q8IYS4 520 aaPredicted RBP26.88■■□□□ 1.89
SLC12A4-217ENST00000576462 CANXP27824 592 aaKnown RBP26.86■■□□□ 1.89
SLC12A4-217ENST00000576462 PER1O15534 1290 aaPredicted RBP26.85■■□□□ 1.89
SLC12A4-217ENST00000576462 VIRMAQ69YN4 1812 aaKnown RBP26.84■■□□□ 1.89
SLC12A4-217ENST00000576462 BCL2L12Q9HB09 334 aa26.84■■□□□ 1.89
SLC12A4-217ENST00000576462 KDM2BQ8NHM5 1336 aa26.84■■□□□ 1.89
SLC12A4-217ENST00000576462 U2SURPO15042 1029 aaKnown RBP26.83■■□□□ 1.89
SLC12A4-217ENST00000576462 SERPINB2P05120 415 aa26.83■■□□□ 1.89
SLC12A4-217ENST00000576462 RASSF7Q02833 373 aa26.83■■□□□ 1.89
SLC12A4-217ENST00000576462 TTC5Q8N0Z6 440 aa26.83■■□□□ 1.89
SLC12A4-217ENST00000576462 VSIG10Q8N0Z9 540 aa26.83■■□□□ 1.89
SLC12A4-217ENST00000576462 RBM46Q8TBY0 533 aaKnown RBP26.83■■□□□ 1.89
SLC12A4-217ENST00000576462 RRAGCQ9HB90 399 aa26.83■■□□□ 1.89
SLC12A4-217ENST00000576462 BICDL1Q6ZP65 573 aa26.82■■□□□ 1.88
SLC12A4-217ENST00000576462 AFDNP55196 1824 aaKnown RBP26.81■■□□□ 1.88
SLC12A4-217ENST00000576462 STARD3NLO95772 234 aa26.8■■□□□ 1.88
SLC12A4-217ENST00000576462 DNAJC5GQ8N7S2 189 aa26.8■■□□□ 1.88
SLC12A4-217ENST00000576462 HTRA3P83110 453 aa26.79■■□□□ 1.88
SLC12A4-217ENST00000576462 C2CD5Q86YS7 1000 aa26.79■■□□□ 1.88
SLC12A4-217ENST00000576462 TEFQ10587 303 aa26.78■■□□□ 1.88
SLC12A4-217ENST00000576462 ZNF330Q9Y3S2 320 aaPredicted RBP26.78■■□□□ 1.88
SLC12A4-217ENST00000576462 CARMIL3Q8ND23 1372 aa26.77■■□□□ 1.88
SLC12A4-217ENST00000576462 ZNF496Q96IT1 587 aaPredicted RBP26.77■■□□□ 1.88
SLC12A4-217ENST00000576462 UBR2Q8IWV8 1755 aa26.76■■□□□ 1.88
SLC12A4-217ENST00000576462 TTLL6Q8N841 843 aa26.76■■□□□ 1.87
SLC12A4-217ENST00000576462 IL17REQ8NFR9 667 aa26.76■■□□□ 1.87
SLC12A4-217ENST00000576462 SBF1O95248 1867 aa26.76■■□□□ 1.87
SLC12A4-217ENST00000576462 NRXN2Q9P2S2 1712 aa26.76■■□□□ 1.87
SLC12A4-217ENST00000576462 COL3A1P02461 1466 aaPredicted RBP26.75■■□□□ 1.87
SLC12A4-217ENST00000576462 A0A087WZG4 1122 aa26.75■■□□□ 1.87
SLC12A4-217ENST00000576462 GNAT3A8MTJ3 354 aa26.75■■□□□ 1.87
SLC12A4-217ENST00000576462 H0YIN7 160 aa26.75■■□□□ 1.87
SLC12A4-217ENST00000576462 EIF5P55010 431 aaKnown RBP26.75■■□□□ 1.87
SLC12A4-217ENST00000576462 FSTL1Q12841 308 aa26.75■■□□□ 1.87
SLC12A4-217ENST00000576462 GAS2L2Q8NHY3 880 aa26.75■■□□□ 1.87
SLC12A4-217ENST00000576462 ZNF790Q6PG37 636 aa26.74■■□□□ 1.87
SLC12A4-217ENST00000576462 HEG1Q9ULI3 1381 aa26.73■■□□□ 1.87
SLC12A4-217ENST00000576462 LMNB1P20700 586 aa26.73■■□□□ 1.87
SLC12A4-217ENST00000576462 PRELPP51888 382 aa26.73■■□□□ 1.87
SLC12A4-217ENST00000576462 TBC1D9BQ66K14 1250 aa26.73■■□□□ 1.87
SLC12A4-217ENST00000576462 TBC1D2BQ9UPU7 963 aa26.73■■□□□ 1.87
SLC12A4-217ENST00000576462 WDR90Q96KV7 1748 aa26.73■■□□□ 1.87
SLC12A4-217ENST00000576462 CCDC24Q8N4L8 307 aa26.72■■□□□ 1.87
SLC12A4-217ENST00000576462 ZNF622Q969S3 477 aaKnown RBP eCLIP26.71■■□□□ 1.873e-9■■□□□ 11.5
SLC12A4-217ENST00000576462 DLEC1Q9Y238 1755 aa26.71■■□□□ 1.87
SLC12A4-217ENST00000576462 TNRC6CQ9HCJ0 1690 aaKnown RBP26.7■■□□□ 1.87
SLC12A4-217ENST00000576462 TEX13AQ9BXU3 409 aaPredicted RBP26.7■■□□□ 1.86
SLC12A4-217ENST00000576462 ZNF219Q9P2Y4 722 aaPredicted RBP26.7■■□□□ 1.86
SLC12A4-217ENST00000576462 NPC1L1Q9UHC9 1359 aa26.69■■□□□ 1.86
SLC12A4-217ENST00000576462 ZC3H4Q9UPT8 1303 aaKnown RBP26.68■■□□□ 1.86
SLC12A4-217ENST00000576462 NFKBIEO00221 500 aa26.68■■□□□ 1.86
SLC12A4-217ENST00000576462 A1BGP04217 495 aa26.68■■□□□ 1.86
SLC12A4-217ENST00000576462 SMC1BQ8NDV3 1235 aa26.68■■□□□ 1.86
SLC12A4-217ENST00000576462 FMNL2Q96PY5 1086 aa26.68■■□□□ 1.86
SLC12A4-217ENST00000576462 GLTPD2A6NH11 291 aa26.67■■□□□ 1.86
SLC12A4-217ENST00000576462 KCNQ3O43525 872 aa26.67■■□□□ 1.86
SLC12A4-217ENST00000576462 NPM2Q86SE8 214 aaKnown RBP26.67■■□□□ 1.86
SLC12A4-217ENST00000576462 KLRG1Q96E93 195 aa26.67■■□□□ 1.86
SLC12A4-217ENST00000576462 PHACTR3Q96KR7 559 aa26.67■■□□□ 1.86
SLC12A4-217ENST00000576462 PRKAR2BP31323 418 aa26.66■■□□□ 1.86
SLC12A4-217ENST00000576462 IL6STP40189 918 aaPredicted RBP26.66■■□□□ 1.86
SLC12A4-217ENST00000576462 PRR5LQ6MZQ0 368 aa26.66■■□□□ 1.86
SLC12A4-217ENST00000576462 BTBD11A6QL63 1104 aa26.65■■□□□ 1.86
SLC12A4-217ENST00000576462 PDE6BP35913 854 aa26.65■■□□□ 1.86
SLC12A4-217ENST00000576462 BRIP1Q9BX63 1249 aa26.65■■□□□ 1.86
SLC12A4-217ENST00000576462 SIPA1L3O60292 1781 aaPredicted RBP26.64■■□□□ 1.86
SLC12A4-217ENST00000576462 SCN7AQ01118 1682 aa26.64■■□□□ 1.86
SLC12A4-217ENST00000576462 NPHP1O15259 732 aa26.64■■□□□ 1.86
SLC12A4-217ENST00000576462 C21orf2O43822 256 aa26.64■■□□□ 1.86
SLC12A4-217ENST00000576462 VEGFAP15692 232 aaPredicted RBP26.64■■□□□ 1.86
SLC12A4-217ENST00000576462 CFAP53Q96M91 514 aa26.63■■□□□ 1.85
SLC12A4-217ENST00000576462 SETDB2Q96T68 719 aa26.63■■□□□ 1.85
SLC12A4-217ENST00000576462 ANKRD31Q8N7Z5 1873 aa26.63■■□□□ 1.85
SLC12A4-217ENST00000576462 TIAM2Q8IVF5 1701 aa26.62■■□□□ 1.85
SLC12A4-217ENST00000576462 CEMIPQ8WUJ3 1361 aa26.62■■□□□ 1.85
SLC12A4-217ENST00000576462 PIP4K2AP48426 406 aaPredicted RBP26.62■■□□□ 1.85
SLC12A4-217ENST00000576462 CAMTA2O94983 1202 aa26.61■■□□□ 1.85
SLC12A4-217ENST00000576462 CNBD1Q8NA66 436 aa26.61■■□□□ 1.85
SLC12A4-217ENST00000576462 RSPH6AQ9H0K4 717 aa26.61■■□□□ 1.85
SLC12A4-217ENST00000576462 PDZRN3Q9UPQ7 1066 aa26.61■■□□□ 1.85
SLC12A4-217ENST00000576462 CCDC88AQ3V6T2 1871 aa26.6■■□□□ 1.85
SLC12A4-217ENST00000576462 DZIP3Q86Y13 1208 aaKnown RBP26.6■■□□□ 1.85
SLC12A4-217ENST00000576462 COL11A2P13942 1736 aaPredicted RBP26.59■■□□□ 1.85
SLC12A4-217ENST00000576462 USP16Q9Y5T5 823 aa26.59■■□□□ 1.85
SLC12A4-217ENST00000576462 PRAMEF22A3QJZ6 481 aa26.58■■□□□ 1.85
SLC12A4-217ENST00000576462 ST5P78524 1137 aa26.58■■□□□ 1.85
SLC12A4-217ENST00000576462 ERFEQ4G0M1 354 aa26.58■■□□□ 1.85
SLC12A4-217ENST00000576462 JMYQ8N9B5 988 aa26.58■■□□□ 1.85
SLC12A4-217ENST00000576462 U2AF1L5P0DN76 240 aaPredicted RBP26.57■■□□□ 1.84
SLC12A4-217ENST00000576462 U2AF1Q01081 240 aaKnown RBP eCLIP26.57■■□□□ 1.84
SLC12A4-217ENST00000576462 DPY19L2Q6NUT2 758 aa26.57■■□□□ 1.84
SLC12A4-217ENST00000576462 MCM10Q7L590 875 aa26.57■■□□□ 1.84
SLC12A4-217ENST00000576462 NUDCQ9Y266 331 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms