RNA–Protein interactions for RNA: ENST00000575547.1

POLR2A-204, Transcript of RNA polymerase II subunit A, humanhuman

TSL 3

Gene POLR2A, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-204ENST00000575547 ZNF330Q9Y3S2 320 aaPredicted RBP8.79□□□□□ -1
POLR2A-204ENST00000575547 C10orf71Q711Q0 1435 aa8.79□□□□□ -1
POLR2A-204ENST00000575547 ZNF831Q5JPB2 1677 aa8.78□□□□□ -1
POLR2A-204ENST00000575547 NPC1L1Q9UHC9 1359 aa8.78□□□□□ -1
POLR2A-204ENST00000575547 KIF3CO14782 793 aa8.78□□□□□ -1
POLR2A-204ENST00000575547 SERPINB2P05120 415 aa8.78□□□□□ -1
POLR2A-204ENST00000575547 U2AF1L5P0DN76 240 aaPredicted RBP8.78□□□□□ -1
POLR2A-204ENST00000575547 U2AF1Q01081 240 aaKnown RBP eCLIP8.78□□□□□ -1
POLR2A-204ENST00000575547 ZNF790Q6PG37 636 aa8.78□□□□□ -1
POLR2A-204ENST00000575547 C16orf71Q8IYS4 520 aaPredicted RBP8.78□□□□□ -1
POLR2A-204ENST00000575547 RTF1Q92541 710 aaKnown RBP8.78□□□□□ -1
POLR2A-204ENST00000575547 ZNF496Q96IT1 587 aaPredicted RBP8.78□□□□□ -1
POLR2A-204ENST00000575547 N4BP2Q86UW6 1770 aaPredicted RBP8.78□□□□□ -1
POLR2A-204ENST00000575547 SCN11AQ9UI33 1791 aa8.78□□□□□ -1
POLR2A-204ENST00000575547 ADCY9O60503 1353 aa8.77□□□□□ -1.01
POLR2A-204ENST00000575547 BTBD11A6QL63 1104 aa8.77□□□□□ -1.01
POLR2A-204ENST00000575547 H0YIN7 160 aa8.77□□□□□ -1.01
POLR2A-204ENST00000575547 NPHP1O15259 732 aa8.77□□□□□ -1.01
POLR2A-204ENST00000575547 PRKAR2BP31323 418 aa8.77□□□□□ -1.01
POLR2A-204ENST00000575547 EIF5P55010 431 aaKnown RBP8.77□□□□□ -1.01
POLR2A-204ENST00000575547 C2CD5Q86YS7 1000 aa8.77□□□□□ -1.01
POLR2A-204ENST00000575547 PHACTR3Q96KR7 559 aa8.77□□□□□ -1.01
POLR2A-204ENST00000575547 FMNL2Q96PY5 1086 aa8.77□□□□□ -1.01
POLR2A-204ENST00000575547 RNF181Q9P0P0 153 aa8.77□□□□□ -1.01
POLR2A-204ENST00000575547 TBC1D2BQ9UPU7 963 aa8.77□□□□□ -1.01
POLR2A-204ENST00000575547 C4AP0C0L4 1744 aa8.77□□□□□ -1.01
POLR2A-204ENST00000575547 COL5A3P25940 1745 aaPredicted RBP8.77□□□□□ -1.01
POLR2A-204ENST00000575547 COL15A1P39059 1388 aa8.76□□□□□ -1.01
POLR2A-204ENST00000575547 TOMM70O94826 608 aa8.76□□□□□ -1.01
POLR2A-204ENST00000575547 A1BGP04217 495 aa8.76□□□□□ -1.01
POLR2A-204ENST00000575547 TTLL6Q8N841 843 aa8.76□□□□□ -1.01
POLR2A-204ENST00000575547 ZNF622Q969S3 477 aaKnown RBP eCLIP8.76□□□□□ -1.01
POLR2A-204ENST00000575547 KCNQ3O43525 872 aa8.75□□□□□ -1.01
POLR2A-204ENST00000575547 NEFMP07197 916 aa8.75□□□□□ -1.01
POLR2A-204ENST00000575547 PPP2R1AP30153 589 aa8.75□□□□□ -1.01
POLR2A-204ENST00000575547 SETDB2Q96T68 719 aa8.75□□□□□ -1.01
POLR2A-204ENST00000575547 RSPH6AQ9H0K4 717 aa8.75□□□□□ -1.01
POLR2A-204ENST00000575547 BCL2L12Q9HB09 334 aa8.75□□□□□ -1.01
POLR2A-204ENST00000575547 RRAGCQ9HB90 399 aa8.75□□□□□ -1.01
POLR2A-204ENST00000575547 NMRK2Q9NPI5 230 aa8.75□□□□□ -1.01
POLR2A-204ENST00000575547 KDM2BQ8NHM5 1336 aa8.75□□□□□ -1.01
POLR2A-204ENST00000575547 KIF13BQ9NQT8 1826 aa8.75□□□□□ -1.01
POLR2A-204ENST00000575547 HEG1Q9ULI3 1381 aa8.74□□□□□ -1.01
POLR2A-204ENST00000575547 PDE6BP35913 854 aa8.74□□□□□ -1.01
POLR2A-204ENST00000575547 IL6STP40189 918 aaPredicted RBP8.74□□□□□ -1.01
POLR2A-204ENST00000575547 APLP1P51693 650 aa8.74□□□□□ -1.01
POLR2A-204ENST00000575547 TBC1D9BQ66K14 1250 aa8.74□□□□□ -1.01
POLR2A-204ENST00000575547 MCM10Q7L590 875 aa8.74□□□□□ -1.01
POLR2A-204ENST00000575547 ZNF219Q9P2Y4 722 aaPredicted RBP8.74□□□□□ -1.01
POLR2A-204ENST00000575547 PDZRN3Q9UPQ7 1066 aa8.74□□□□□ -1.01
POLR2A-204ENST00000575547 TJP1Q07157 1748 aa8.74□□□□□ -1.01
POLR2A-204ENST00000575547 SNRPA1P09661 255 aaKnown RBP8.73□□□□□ -1.01
POLR2A-204ENST00000575547 LMNB1P20700 586 aa8.73□□□□□ -1.01
POLR2A-204ENST00000575547 CCDC24Q8N4L8 307 aa8.73□□□□□ -1.01
POLR2A-204ENST00000575547 BRIP1Q9BX63 1249 aa8.73□□□□□ -1.01
POLR2A-204ENST00000575547 USP16Q9Y5T5 823 aa8.73□□□□□ -1.01
POLR2A-204ENST00000575547 KCPQ6ZWJ8 1503 aa8.73□□□□□ -1.01
POLR2A-204ENST00000575547 MRC1P22897 1456 aa8.72□□□□□ -1.01
POLR2A-204ENST00000575547 HTATSF1O43719 755 aaKnown RBP8.72□□□□□ -1.01
POLR2A-204ENST00000575547 ST5P78524 1137 aa8.72□□□□□ -1.01
POLR2A-204ENST00000575547 RASSF7Q02833 373 aa8.72□□□□□ -1.01
POLR2A-204ENST00000575547 DCTN1Q14203 1278 aa8.72□□□□□ -1.01
POLR2A-204ENST00000575547 TAF7Q15545 349 aaPredicted RBP8.72□□□□□ -1.01
POLR2A-204ENST00000575547 DZIP3Q86Y13 1208 aaKnown RBP8.72□□□□□ -1.01
POLR2A-204ENST00000575547 RBM46Q8TBY0 533 aaKnown RBP8.72□□□□□ -1.01
POLR2A-204ENST00000575547 C21orf2O43822 256 aa8.71□□□□□ -1.02
POLR2A-204ENST00000575547 CAMTA2O94983 1202 aa8.71□□□□□ -1.02
POLR2A-204ENST00000575547 PIP4K2AP48426 406 aaPredicted RBP8.71□□□□□ -1.02
POLR2A-204ENST00000575547 PRR5LQ6MZQ0 368 aa8.71□□□□□ -1.02
POLR2A-204ENST00000575547 CNBD1Q8NA66 436 aa8.71□□□□□ -1.02
POLR2A-204ENST00000575547 CNKSR1Q969H4 720 aa8.71□□□□□ -1.02
POLR2A-204ENST00000575547 PNNQ9H307 717 aaKnown RBP8.71□□□□□ -1.02
POLR2A-204ENST00000575547 MIS18AQ9NYP9 233 aa8.71□□□□□ -1.02
POLR2A-204ENST00000575547 ZNF652Q9Y2D9 606 aa8.71□□□□□ -1.02
POLR2A-204ENST00000575547 KIAA1551Q9HCM1 1747 aa8.71□□□□□ -1.02
POLR2A-204ENST00000575547 VIRMAQ69YN4 1812 aaKnown RBP8.7□□□□□ -1.02
POLR2A-204ENST00000575547 COL3A1P02461 1466 aaPredicted RBP8.7□□□□□ -1.02
POLR2A-204ENST00000575547 PRAMEF22A3QJZ6 481 aa8.7□□□□□ -1.02
POLR2A-204ENST00000575547 GLTPD2A6NH11 291 aa8.7□□□□□ -1.02
POLR2A-204ENST00000575547 VEGFAP15692 232 aaPredicted RBP8.7□□□□□ -1.02
POLR2A-204ENST00000575547 GTF2E1P29083 439 aaPredicted RBP8.7□□□□□ -1.02
POLR2A-204ENST00000575547 FSTL1Q12841 308 aa8.7□□□□□ -1.02
POLR2A-204ENST00000575547 DPY19L2Q6NUT2 758 aa8.7□□□□□ -1.02
POLR2A-204ENST00000575547 CLEC4GQ6UXB4 293 aa8.7□□□□□ -1.02
POLR2A-204ENST00000575547 NBPF5PQ86XG9 351 aaPredicted RBP8.7□□□□□ -1.02
POLR2A-204ENST00000575547 NGEFQ8N5V2 710 aa8.7□□□□□ -1.02
POLR2A-204ENST00000575547 CARMIL3Q8ND23 1372 aa8.7□□□□□ -1.02
POLR2A-204ENST00000575547 CEMIPQ8WUJ3 1361 aa8.7□□□□□ -1.02
POLR2A-204ENST00000575547 ARFGEF1Q9Y6D6 1849 aa8.69□□□□□ -1.02
POLR2A-204ENST00000575547 FAM177BA6PVY3 158 aa8.69□□□□□ -1.02
POLR2A-204ENST00000575547 TPTE2Q6XPS3 522 aa8.69□□□□□ -1.02
POLR2A-204ENST00000575547 PNISRQ8TF01 805 aaKnown RBP8.69□□□□□ -1.02
POLR2A-204ENST00000575547 MASTLQ96GX5 879 aa8.69□□□□□ -1.02
POLR2A-204ENST00000575547 ZC3H4Q9UPT8 1303 aaKnown RBP8.69□□□□□ -1.02
POLR2A-204ENST00000575547 AFDNP55196 1824 aaKnown RBP8.68□□□□□ -1.02
POLR2A-204ENST00000575547 BRCA1P38398 1863 aaKnown RBP8.68□□□□□ -1.02
POLR2A-204ENST00000575547 ERFEQ4G0M1 354 aa8.68□□□□□ -1.02
POLR2A-204ENST00000575547 SOGA3Q5TF21 947 aa8.68□□□□□ -1.02
POLR2A-204ENST00000575547 STYK1Q6J9G0 422 aa8.68□□□□□ -1.02
POLR2A-204ENST00000575547 SMC1BQ8NDV3 1235 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms