RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 ERO1AQ96HE7 468 aa9.47□□□□□ -0.89
TOM1L1-220ENST00000575333 FAM107BQ9H098 131 aa9.47□□□□□ -0.89
TOM1L1-220ENST00000575333 CWC22Q9HCG8 908 aaKnown RBP9.47□□□□□ -0.89
TOM1L1-220ENST00000575333 KDM5CP41229 1560 aa9.47□□□□□ -0.89
TOM1L1-220ENST00000575333 IGHDP01880 384 aa9.47□□□□□ -0.89
TOM1L1-220ENST00000575333 KMT5BQ4FZB7 885 aa9.47□□□□□ -0.89
TOM1L1-220ENST00000575333 ZNF513Q8N8E2 541 aaPredicted RBP9.47□□□□□ -0.89
TOM1L1-220ENST00000575333 UPF1Q92900 1129 aaKnown RBP eCLIP9.47□□□□□ -0.89
TOM1L1-220ENST00000575333 ARIH1Q9Y4X5 557 aaPredicted RBP9.47□□□□□ -0.89
TOM1L1-220ENST00000575333 ASXL2Q76L83 1435 aa9.46□□□□□ -0.89
TOM1L1-220ENST00000575333 CASKIN1Q8WXD9 1431 aa9.46□□□□□ -0.89
TOM1L1-220ENST00000575333 TRIM66O15016 1216 aa9.46□□□□□ -0.9
TOM1L1-220ENST00000575333 COQ9O75208 318 aa9.46□□□□□ -0.9
TOM1L1-220ENST00000575333 CYP2E1P05181 493 aaPredicted RBP9.46□□□□□ -0.9
TOM1L1-220ENST00000575333 DUSP27Q5VZP5 1158 aa9.46□□□□□ -0.9
TOM1L1-220ENST00000575333 MCTP1Q6DN14 999 aa9.46□□□□□ -0.9
TOM1L1-220ENST00000575333 TSHZ1Q6ZSZ6 1077 aa9.46□□□□□ -0.9
TOM1L1-220ENST00000575333 NFATC2IPQ8NCF5 419 aa9.46□□□□□ -0.9
TOM1L1-220ENST00000575333 PTPRCP08575 1304 aa9.46□□□□□ -0.9
TOM1L1-220ENST00000575333 NKTRP30414 1462 aaKnown RBP9.46□□□□□ -0.9
TOM1L1-220ENST00000575333 CDK13Q14004 1512 aaKnown RBP9.46□□□□□ -0.9
TOM1L1-220ENST00000575333 SMC2O95347 1197 aa9.45□□□□□ -0.9
TOM1L1-220ENST00000575333 RBM6P78332 1123 aaKnown RBP9.45□□□□□ -0.9
TOM1L1-220ENST00000575333 PACS2Q86VP3 889 aa9.45□□□□□ -0.9
TOM1L1-220ENST00000575333 SUDS3Q9H7L9 328 aaPredicted RBP9.45□□□□□ -0.9
TOM1L1-220ENST00000575333 A1CFQ9NQ94 594 aaKnown RBP9.45□□□□□ -0.9
TOM1L1-220ENST00000575333 FGD6Q6ZV73 1430 aa9.45□□□□□ -0.9
TOM1L1-220ENST00000575333 SYCE3A1L190 88 aa9.45□□□□□ -0.9
TOM1L1-220ENST00000575333 ANKRD18BA2A2Z9 1011 aa9.45□□□□□ -0.9
TOM1L1-220ENST00000575333 TNNT1P13805 278 aa9.45□□□□□ -0.9
TOM1L1-220ENST00000575333 SART3Q15020 963 aaKnown RBP9.45□□□□□ -0.9
TOM1L1-220ENST00000575333 CCDC96Q2M329 555 aa9.45□□□□□ -0.9
TOM1L1-220ENST00000575333 EFCAB13Q8IY85 973 aa9.45□□□□□ -0.9
TOM1L1-220ENST00000575333 EXOC4Q96A65 974 aa9.45□□□□□ -0.9
TOM1L1-220ENST00000575333 BORCS6Q96GS4 357 aa9.45□□□□□ -0.9
TOM1L1-220ENST00000575333 RWDD1Q9H446 243 aaPredicted RBP9.45□□□□□ -0.9
TOM1L1-220ENST00000575333 LRRIQ1Q96JM4 1722 aa9.44□□□□□ -0.9
TOM1L1-220ENST00000575333 RPS6KA5O75582 802 aa9.44□□□□□ -0.9
TOM1L1-220ENST00000575333 L3MBTL2Q969R5 705 aa9.44□□□□□ -0.9
TOM1L1-220ENST00000575333 TTC12Q9H892 705 aaPredicted RBP9.44□□□□□ -0.9
TOM1L1-220ENST00000575333 ARGLU1Q9NWB6 273 aaPredicted RBP9.44□□□□□ -0.9
TOM1L1-220ENST00000575333 ANAPC4Q9UJX5 808 aa9.44□□□□□ -0.9
TOM1L1-220ENST00000575333 USP47Q96K76 1375 aa9.43□□□□□ -0.9
TOM1L1-220ENST00000575333 IPO8O15397 1037 aaKnown RBP9.43□□□□□ -0.9
TOM1L1-220ENST00000575333 SETSIPP0DME0 302 aa9.43□□□□□ -0.9
TOM1L1-220ENST00000575333 FAM69CQ0P6D2 419 aa9.43□□□□□ -0.9
TOM1L1-220ENST00000575333 AP1ARQ63HQ0 302 aa9.43□□□□□ -0.9
TOM1L1-220ENST00000575333 LEKR1Q6ZMV7 388 aa9.43□□□□□ -0.9
TOM1L1-220ENST00000575333 ETAA1Q9NY74 926 aa9.43□□□□□ -0.9
TOM1L1-220ENST00000575333 REREQ9P2R6 1566 aa9.43□□□□□ -0.9
TOM1L1-220ENST00000575333 WDR7Q9Y4E6 1490 aa9.43□□□□□ -0.9
TOM1L1-220ENST00000575333 ELP1O95163 1332 aa9.43□□□□□ -0.9
TOM1L1-220ENST00000575333 TMCO5BA8MYB1 307 aa9.42□□□□□ -0.9
TOM1L1-220ENST00000575333 ADCY5O95622 1261 aa9.42□□□□□ -0.9
TOM1L1-220ENST00000575333 ICA1Q05084 483 aa9.42□□□□□ -0.9
TOM1L1-220ENST00000575333 ADCY2Q08462 1091 aa9.42□□□□□ -0.9
TOM1L1-220ENST00000575333 TRAF1Q13077 416 aa9.42□□□□□ -0.9
TOM1L1-220ENST00000575333 RGL3Q3MIN7 710 aa9.42□□□□□ -0.9
TOM1L1-220ENST00000575333 NEK11Q8NG66 645 aa9.42□□□□□ -0.9
TOM1L1-220ENST00000575333 GPT2Q8TD30 523 aa9.42□□□□□ -0.9
TOM1L1-220ENST00000575333 TMEM63CQ9P1W3 806 aa9.42□□□□□ -0.9
TOM1L1-220ENST00000575333 MKRN1Q9UHC7 482 aaKnown RBP9.42□□□□□ -0.9
TOM1L1-220ENST00000575333 ZNF521Q96K83 1311 aa9.42□□□□□ -0.9
TOM1L1-220ENST00000575333 H2AFXP16104 143 aaPredicted RBP9.42□□□□□ -0.9
TOM1L1-220ENST00000575333 ACTN2P35609 894 aa9.42□□□□□ -0.9
TOM1L1-220ENST00000575333 CORO7P57737 925 aa9.42□□□□□ -0.9
TOM1L1-220ENST00000575333 FBXO38Q6PIJ6 1188 aa9.42□□□□□ -0.9
TOM1L1-220ENST00000575333 ERC1Q8IUD2 1116 aa9.42□□□□□ -0.9
TOM1L1-220ENST00000575333 SLAIN1Q8ND83 568 aa9.42□□□□□ -0.9
TOM1L1-220ENST00000575333 OXER1Q8TDS5 423 aa9.42□□□□□ -0.9
TOM1L1-220ENST00000575333 DNAAF4Q8WXU2 420 aa9.42□□□□□ -0.9
TOM1L1-220ENST00000575333 TMX4Q9H1E5 349 aaPredicted RBP9.42□□□□□ -0.9
TOM1L1-220ENST00000575333 PDZRN3Q9UPQ7 1066 aa9.42□□□□□ -0.9
TOM1L1-220ENST00000575333 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.42□□□□□ -0.9
TOM1L1-220ENST00000575333 DIP2BQ9P265 1576 aa9.42□□□□□ -0.9
TOM1L1-220ENST00000575333 KIF13AQ9H1H9 1805 aa9.42□□□□□ -0.9
TOM1L1-220ENST00000575333 ABCC10Q5T3U5 1492 aa9.41□□□□□ -0.9
TOM1L1-220ENST00000575333 MBD5Q9P267 1494 aa9.41□□□□□ -0.9
TOM1L1-220ENST00000575333 CCDC171Q6TFL3 1326 aa9.41□□□□□ -0.9
TOM1L1-220ENST00000575333 GIMAP7Q8NHV1 300 aa9.41□□□□□ -0.9
TOM1L1-220ENST00000575333 ZNF526Q8TF50 670 aaPredicted RBP9.41□□□□□ -0.9
TOM1L1-220ENST00000575333 SH3GL3Q99963 347 aa9.41□□□□□ -0.9
TOM1L1-220ENST00000575333 LCMT1Q9UIC8 334 aa9.41□□□□□ -0.9
TOM1L1-220ENST00000575333 TESPA1A2RU30 521 aaPredicted RBP9.4□□□□□ -0.9
TOM1L1-220ENST00000575333 CCP110O43303 1012 aa9.4□□□□□ -0.9
TOM1L1-220ENST00000575333 RWDD2BP57060 319 aa9.4□□□□□ -0.9
TOM1L1-220ENST00000575333 MAP3K9P80192 1104 aa9.4□□□□□ -0.9
TOM1L1-220ENST00000575333 PDCD2Q16342 344 aaPredicted RBP9.4□□□□□ -0.9
TOM1L1-220ENST00000575333 CCDC30Q5VVM6 783 aa9.4□□□□□ -0.9
TOM1L1-220ENST00000575333 WWC2Q6AWC2 1192 aa9.4□□□□□ -0.9
TOM1L1-220ENST00000575333 TTLL5Q6EMB2 1281 aa9.4□□□□□ -0.9
TOM1L1-220ENST00000575333 UTP14AQ9BVJ6 771 aaKnown RBP9.4□□□□□ -0.9
TOM1L1-220ENST00000575333 ZSCAN16Q9H4T2 348 aaPredicted RBP9.4□□□□□ -0.9
TOM1L1-220ENST00000575333 SCUBE2Q9NQ36 999 aa9.4□□□□□ -0.9
TOM1L1-220ENST00000575333 FHOD1Q9Y613 1164 aa9.4□□□□□ -0.9
TOM1L1-220ENST00000575333 SPAG9O60271 1321 aaKnown RBP9.4□□□□□ -0.9
TOM1L1-220ENST00000575333 DENND4BO75064 1496 aaPredicted RBP9.4□□□□□ -0.91
TOM1L1-220ENST00000575333 PNMA6AP0CW24 399 aaPredicted RBP9.4□□□□□ -0.91
TOM1L1-220ENST00000575333 HSP90AB4PQ58FF6 505 aa9.4□□□□□ -0.91
TOM1L1-220ENST00000575333 RINLQ6ZS11 566 aa9.4□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms