RNA–Protein interactions for RNA: ENST00000574999.1

ATP2A3-214, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 3

Gene ATP2A3, Length 776 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-214ENST00000574999 POLRMTO00411 1230 aaKnown RBP17.59■□□□□ 0.41
ATP2A3-214ENST00000574999 DPEP1P16444 411 aa17.59■□□□□ 0.41
ATP2A3-214ENST00000574999 KCNA3P22001 575 aa17.59■□□□□ 0.41
ATP2A3-214ENST00000574999 KIAA1551Q9HCM1 1747 aa17.58■□□□□ 0.41
ATP2A3-214ENST00000574999 HEG1Q9ULI3 1381 aa17.58■□□□□ 0.4
ATP2A3-214ENST00000574999 CEP350Q5VT06 3117 aa17.58■□□□□ 0.4
ATP2A3-214ENST00000574999 KCNQ3O43525 872 aa17.58■□□□□ 0.4
ATP2A3-214ENST00000574999 STARD3NLO95772 234 aa17.58■□□□□ 0.4
ATP2A3-214ENST00000574999 CANXP27824 592 aaKnown RBP17.58■□□□□ 0.4
ATP2A3-214ENST00000574999 EIF5P55010 431 aaKnown RBP17.58■□□□□ 0.4
ATP2A3-214ENST00000574999 BCL2L12Q9HB09 334 aa17.58■□□□□ 0.4
ATP2A3-214ENST00000574999 COL15A1P39059 1388 aa17.57■□□□□ 0.4
ATP2A3-214ENST00000574999 BTBD11A6QL63 1104 aa17.57■□□□□ 0.4
ATP2A3-214ENST00000574999 TEX13AQ9BXU3 409 aaPredicted RBP17.57■□□□□ 0.4
ATP2A3-214ENST00000574999 SIPA1L3O60292 1781 aaPredicted RBP17.56■□□□□ 0.4
ATP2A3-214ENST00000574999 MCM10Q7L590 875 aa17.56■□□□□ 0.4
ATP2A3-214ENST00000574999 FMNL2Q96PY5 1086 aa17.56■□□□□ 0.4
ATP2A3-214ENST00000574999 C1QTNF8P60827 252 aa17.55■□□□□ 0.4
ATP2A3-214ENST00000574999 NFIXQ14938 502 aa17.55■□□□□ 0.4
ATP2A3-214ENST00000574999 BCS1LQ9Y276 419 aa17.55■□□□□ 0.4
ATP2A3-214ENST00000574999 N4BP2Q86UW6 1770 aaPredicted RBP17.55■□□□□ 0.4
ATP2A3-214ENST00000574999 ADCY9O60503 1353 aa17.54■□□□□ 0.4
ATP2A3-214ENST00000574999 HTATSF1O43719 755 aaKnown RBP17.54■□□□□ 0.4
ATP2A3-214ENST00000574999 A1BGP04217 495 aa17.54■□□□□ 0.4
ATP2A3-214ENST00000574999 DCTN1Q14203 1278 aa17.54■□□□□ 0.4
ATP2A3-214ENST00000574999 RTF1Q92541 710 aaKnown RBP17.54■□□□□ 0.4
ATP2A3-214ENST00000574999 ATP10DQ9P241 1426 aa17.54■□□□□ 0.4
ATP2A3-214ENST00000574999 PLEKHF1Q96S99 279 aa17.53■□□□□ 0.4
ATP2A3-214ENST00000574999 GIGYF1O75420 1035 aaPredicted RBP17.52■□□□□ 0.4
ATP2A3-214ENST00000574999 IL6STP40189 918 aaPredicted RBP17.52■□□□□ 0.4
ATP2A3-214ENST00000574999 PIM2Q9P1W9 311 aa17.52■□□□□ 0.4
ATP2A3-214ENST00000574999 USP16Q9Y5T5 823 aa17.52■□□□□ 0.4
ATP2A3-214ENST00000574999 A0A087WZG4 1122 aa17.51■□□□□ 0.39
ATP2A3-214ENST00000574999 PRAMEF22A3QJZ6 481 aa17.51■□□□□ 0.39
ATP2A3-214ENST00000574999 CHRNA5P30532 468 aa17.51■□□□□ 0.39
ATP2A3-214ENST00000574999 ARHGAP27Q6ZUM4 889 aa17.51■□□□□ 0.39
ATP2A3-214ENST00000574999 SERPINB2P05120 415 aa17.5■□□□□ 0.39
ATP2A3-214ENST00000574999 TBC1D2BQ9UPU7 963 aa17.5■□□□□ 0.39
ATP2A3-214ENST00000574999 TAF7Q15545 349 aaPredicted RBP17.49■□□□□ 0.39
ATP2A3-214ENST00000574999 DALRD3Q5D0E6 543 aaKnown RBP17.49■□□□□ 0.39
ATP2A3-214ENST00000574999 SNRPA1P09661 255 aaKnown RBP17.48■□□□□ 0.39
ATP2A3-214ENST00000574999 DDX10Q13206 875 aaKnown RBP17.48■□□□□ 0.39
ATP2A3-214ENST00000574999 TBC1D9BQ66K14 1250 aa17.48■□□□□ 0.39
ATP2A3-214ENST00000574999 ZNF526Q8TF50 670 aaPredicted RBP17.48■□□□□ 0.39
ATP2A3-214ENST00000574999 GPBP1L1Q9HC44 474 aaPredicted RBP17.48■□□□□ 0.39
ATP2A3-214ENST00000574999 MIS18AQ9NYP9 233 aa17.48■□□□□ 0.39
ATP2A3-214ENST00000574999 BRCA1P38398 1863 aaKnown RBP17.48■□□□□ 0.39
ATP2A3-214ENST00000574999 RALBP1Q15311 655 aa17.47■□□□□ 0.39
ATP2A3-214ENST00000574999 BICDL1Q6ZP65 573 aa17.47■□□□□ 0.39
ATP2A3-214ENST00000574999 ZNF330Q9Y3S2 320 aaPredicted RBP17.47■□□□□ 0.39
ATP2A3-214ENST00000574999 NRXN2Q9P2S2 1712 aa17.47■□□□□ 0.39
ATP2A3-214ENST00000574999 CAMTA2O94983 1202 aa17.46■□□□□ 0.39
ATP2A3-214ENST00000574999 PIP4K2AP48426 406 aaPredicted RBP17.46■□□□□ 0.39
ATP2A3-214ENST00000574999 NFE2L2Q16236 605 aa17.46■□□□□ 0.39
ATP2A3-214ENST00000574999 NEFMP07197 916 aa17.45■□□□□ 0.38
ATP2A3-214ENST00000574999 AFDNP55196 1824 aaKnown RBP17.44■□□□□ 0.38
ATP2A3-214ENST00000574999 PNNQ9H307 717 aaKnown RBP17.44■□□□□ 0.38
ATP2A3-214ENST00000574999 CARMIL3Q8ND23 1372 aa17.43■□□□□ 0.38
ATP2A3-214ENST00000574999 NBPF26B4DH59 902 aa17.43■□□□□ 0.38
ATP2A3-214ENST00000574999 NBPF10Q6P3W6 841 aaKnown RBP17.43■□□□□ 0.38
ATP2A3-214ENST00000574999 DZIP3Q86Y13 1208 aaKnown RBP17.43■□□□□ 0.38
ATP2A3-214ENST00000574999 NBPF15Q8N660 670 aa17.43■□□□□ 0.38
ATP2A3-214ENST00000574999 THUMPD2Q9BTF0 503 aaKnown RBP17.43■□□□□ 0.38
ATP2A3-214ENST00000574999 SENP3-EIF4A1A0A087X0R7 540 aa17.42■□□□□ 0.38
ATP2A3-214ENST00000574999 C9orf131Q5VYM1 1079 aa17.42■□□□□ 0.38
ATP2A3-214ENST00000574999 NPM2Q86SE8 214 aaKnown RBP17.42■□□□□ 0.38
ATP2A3-214ENST00000574999 C2CD5Q86YS7 1000 aa17.42■□□□□ 0.38
ATP2A3-214ENST00000574999 PNISRQ8TF01 805 aaKnown RBP17.42■□□□□ 0.38
ATP2A3-214ENST00000574999 SETDB2Q96T68 719 aa17.42■□□□□ 0.38
ATP2A3-214ENST00000574999 H0YIN7 160 aa17.41■□□□□ 0.38
ATP2A3-214ENST00000574999 PRR5LQ6MZQ0 368 aa17.41■□□□□ 0.38
ATP2A3-214ENST00000574999 CCDC24Q8N4L8 307 aa17.41■□□□□ 0.38
ATP2A3-214ENST00000574999 BRIP1Q9BX63 1249 aa17.41■□□□□ 0.38
ATP2A3-214ENST00000574999 ARFGEF1Q9Y6D6 1849 aa17.41■□□□□ 0.38
ATP2A3-214ENST00000574999 SCN7AQ01118 1682 aa17.41■□□□□ 0.38
ATP2A3-214ENST00000574999 KIF3CO14782 793 aa17.4■□□□□ 0.38
ATP2A3-214ENST00000574999 EIF4A1P60842 406 aaKnown RBP17.4■□□□□ 0.38
ATP2A3-214ENST00000574999 CLEC4GQ6UXB4 293 aa17.4■□□□□ 0.38
ATP2A3-214ENST00000574999 TTLL6Q8N841 843 aa17.4■□□□□ 0.38
ATP2A3-214ENST00000574999 MAPK8IP3Q9UPT6 1336 aa17.4■□□□□ 0.38
ATP2A3-214ENST00000574999 MYBBP1AQ9BQG0 1328 aaKnown RBP17.39■□□□□ 0.37
ATP2A3-214ENST00000574999 PDE6BP35913 854 aa17.38■□□□□ 0.37
ATP2A3-214ENST00000574999 PDZRN3Q9UPQ7 1066 aa17.38■□□□□ 0.37
ATP2A3-214ENST00000574999 DLG5Q8TDM6 1919 aa17.38■□□□□ 0.37
ATP2A3-214ENST00000574999 RGL2O15211 777 aa17.37■□□□□ 0.37
ATP2A3-214ENST00000574999 RIPK4P57078 832 aa17.37■□□□□ 0.37
ATP2A3-214ENST00000574999 RNF181Q9P0P0 153 aa17.37■□□□□ 0.37
ATP2A3-214ENST00000574999 TMPOP42166 694 aaKnown RBP17.36■□□□□ 0.37
ATP2A3-214ENST00000574999 PRELPP51888 382 aa17.36■□□□□ 0.37
ATP2A3-214ENST00000574999 CNBD1Q8NA66 436 aa17.36■□□□□ 0.37
ATP2A3-214ENST00000574999 ZNF652Q9Y2D9 606 aa17.36■□□□□ 0.37
ATP2A3-214ENST00000574999 RASSF7Q02833 373 aa17.35■□□□□ 0.37
ATP2A3-214ENST00000574999 HLFQ16534 295 aa17.35■□□□□ 0.37
ATP2A3-214ENST00000574999 ZNF622Q969S3 477 aaKnown RBP eCLIP17.35■□□□□ 0.37
ATP2A3-214ENST00000574999 BCORQ6W2J9 1755 aa17.35■□□□□ 0.37
ATP2A3-214ENST00000574999 KDM3BQ7LBC6 1761 aa17.35■□□□□ 0.37
ATP2A3-214ENST00000574999 DLEC1Q9Y238 1755 aa17.35■□□□□ 0.37
ATP2A3-214ENST00000574999 ANKRD31Q8N7Z5 1873 aa17.35■□□□□ 0.37
ATP2A3-214ENST00000574999 ST5P78524 1137 aa17.34■□□□□ 0.37
ATP2A3-214ENST00000574999 NBPF5PQ86XG9 351 aaPredicted RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms