RNA–Protein interactions for RNA: ENST00000574318.1

TOM1L1-217, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-217ENST00000574318 CCDC125Q86Z20 511 aa9.42□□□□□ -0.9
TOM1L1-217ENST00000574318 HOMEZQ8IX15 550 aa9.42□□□□□ -0.9
TOM1L1-217ENST00000574318 IRX2Q9BZI1 471 aaPredicted RBP9.42□□□□□ -0.9
TOM1L1-217ENST00000574318 MYO3AQ8NEV4 1616 aa9.42□□□□□ -0.9
TOM1L1-217ENST00000574318 KDM5DQ9BY66 1539 aa9.41□□□□□ -0.9
TOM1L1-217ENST00000574318 FAM135AQ9P2D6 1515 aa9.41□□□□□ -0.9
TOM1L1-217ENST00000574318 PALM3A6NDB9 673 aaPredicted RBP9.41□□□□□ -0.9
TOM1L1-217ENST00000574318 J3QL48 77 aa9.41□□□□□ -0.9
TOM1L1-217ENST00000574318 PPP1R15AO75807 674 aaPredicted RBP9.41□□□□□ -0.9
TOM1L1-217ENST00000574318 FSHRP23945 695 aa9.41□□□□□ -0.9
TOM1L1-217ENST00000574318 WASF2Q9Y6W5 498 aa9.41□□□□□ -0.9
TOM1L1-217ENST00000574318 ZNF142P52746 1687 aaPredicted RBP9.4□□□□□ -0.9
TOM1L1-217ENST00000574318 ATP9BO43861 1147 aa9.4□□□□□ -0.9
TOM1L1-217ENST00000574318 SLFNL1Q499Z3 407 aa9.4□□□□□ -0.9
TOM1L1-217ENST00000574318 CFAP70Q5T0N1 1121 aa9.4□□□□□ -0.9
TOM1L1-217ENST00000574318 PHTF2Q8N3S3 785 aa9.4□□□□□ -0.9
TOM1L1-217ENST00000574318 CHIC2Q9UKJ5 165 aa9.4□□□□□ -0.9
TOM1L1-217ENST00000574318 MAST1Q9Y2H9 1570 aa9.4□□□□□ -0.9
TOM1L1-217ENST00000574318 INTS6LQ5JSJ4 861 aaKnown RBP9.39□□□□□ -0.91
TOM1L1-217ENST00000574318 RNF20Q5VTR2 975 aa9.39□□□□□ -0.91
TOM1L1-217ENST00000574318 TFIP11Q9UBB9 837 aaKnown RBP9.39□□□□□ -0.91
TOM1L1-217ENST00000574318 MAFBQ9Y5Q3 323 aaPredicted RBP9.39□□□□□ -0.91
TOM1L1-217ENST00000574318 IQSEC2Q5JU85 1478 aa9.39□□□□□ -0.91
TOM1L1-217ENST00000574318 ABCC5O15440 1437 aa9.39□□□□□ -0.91
TOM1L1-217ENST00000574318 ABCC3O15438 1527 aa9.38□□□□□ -0.91
TOM1L1-217ENST00000574318 LZTS3O60299 673 aaPredicted RBP9.38□□□□□ -0.91
TOM1L1-217ENST00000574318 DGAT1O75907 488 aa9.38□□□□□ -0.91
TOM1L1-217ENST00000574318 DHX9Q08211 1270 aaKnown RBP9.38□□□□□ -0.91
TOM1L1-217ENST00000574318 NNTQ13423 1086 aa9.38□□□□□ -0.91
TOM1L1-217ENST00000574318 TBC1D9Q6ZT07 1266 aa9.38□□□□□ -0.91
TOM1L1-217ENST00000574318 RNF135Q8IUD6 432 aa9.38□□□□□ -0.91
TOM1L1-217ENST00000574318 DNMT1P26358 1616 aaKnown RBP9.38□□□□□ -0.91
TOM1L1-217ENST00000574318 AVPP01185 164 aa9.37□□□□□ -0.91
TOM1L1-217ENST00000574318 MAP7D1Q3KQU3 841 aa9.37□□□□□ -0.91
TOM1L1-217ENST00000574318 PLEKHM2Q8IWE5 1019 aa9.37□□□□□ -0.91
TOM1L1-217ENST00000574318 CCDC116Q8IYX3 515 aa9.37□□□□□ -0.91
TOM1L1-217ENST00000574318 PBXIP1Q96AQ6 731 aa9.37□□□□□ -0.91
TOM1L1-217ENST00000574318 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.37□□□□□ -0.91
TOM1L1-217ENST00000574318 KIF15Q9NS87 1388 aa9.37□□□□□ -0.91
TOM1L1-217ENST00000574318 NLRP1Q9C000 1473 aa9.36□□□□□ -0.91
TOM1L1-217ENST00000574318 MROH1Q8NDA8 1641 aa9.36□□□□□ -0.91
TOM1L1-217ENST00000574318 RNF17Q9BXT8 1623 aaKnown RBP9.36□□□□□ -0.91
TOM1L1-217ENST00000574318 FAM187AA6NFU0 413 aa9.36□□□□□ -0.91
TOM1L1-217ENST00000574318 PIK3CDO00329 1044 aa9.36□□□□□ -0.91
TOM1L1-217ENST00000574318 GIGYF1O75420 1035 aaPredicted RBP9.36□□□□□ -0.91
TOM1L1-217ENST00000574318 NR3C2P08235 984 aa9.36□□□□□ -0.91
TOM1L1-217ENST00000574318 THEMISQ8N1K5 641 aaPredicted RBP9.36□□□□□ -0.91
TOM1L1-217ENST00000574318 FGD6Q6ZV73 1430 aa9.36□□□□□ -0.91
TOM1L1-217ENST00000574318 SHANK2Q9UPX8 1470 aa9.35□□□□□ -0.91
TOM1L1-217ENST00000574318 SKIP12755 728 aa9.35□□□□□ -0.91
TOM1L1-217ENST00000574318 LMOD1P29536 600 aaPredicted RBP9.35□□□□□ -0.91
TOM1L1-217ENST00000574318 SRPK2P78362 688 aaKnown RBP9.35□□□□□ -0.91
TOM1L1-217ENST00000574318 ANKLE2Q86XL3 938 aa9.35□□□□□ -0.91
TOM1L1-217ENST00000574318 TRIM52Q96A61 297 aa9.35□□□□□ -0.91
TOM1L1-217ENST00000574318 NEURL4Q96JN8 1562 aa9.35□□□□□ -0.91
TOM1L1-217ENST00000574318 RRP7BPQ9NSQ0 103 aa9.35□□□□□ -0.91
TOM1L1-217ENST00000574318 EMILIN1Q9Y6C2 1016 aa9.35□□□□□ -0.91
TOM1L1-217ENST00000574318 DUOX2Q9NRD8 1548 aa9.35□□□□□ -0.91
TOM1L1-217ENST00000574318 ERVK-7P63135 1459 aa9.34□□□□□ -0.91
TOM1L1-217ENST00000574318 SPATA31D1Q6ZQQ2 1576 aa9.34□□□□□ -0.91
TOM1L1-217ENST00000574318 DAPK1P53355 1430 aa9.34□□□□□ -0.91
TOM1L1-217ENST00000574318 USP17L5A8MUK1 530 aa9.34□□□□□ -0.91
TOM1L1-217ENST00000574318 PKDCCQ504Y2 493 aa9.34□□□□□ -0.91
TOM1L1-217ENST00000574318 PLPP7Q8NBV4 271 aa9.34□□□□□ -0.91
TOM1L1-217ENST00000574318 HPS1Q92902 700 aa9.34□□□□□ -0.91
TOM1L1-217ENST00000574318 KLF16Q9BXK1 252 aaPredicted RBP9.34□□□□□ -0.91
TOM1L1-217ENST00000574318 ERBINQ96RT1 1412 aa9.33□□□□□ -0.92
TOM1L1-217ENST00000574318 UBAP1LF5GYI3 381 aa9.33□□□□□ -0.92
TOM1L1-217ENST00000574318 SMCPP49901 116 aaPredicted RBP9.33□□□□□ -0.92
TOM1L1-217ENST00000574318 CTC1Q2NKJ3 1217 aa9.33□□□□□ -0.92
TOM1L1-217ENST00000574318 TRAF7Q6Q0C0 670 aa9.33□□□□□ -0.92
TOM1L1-217ENST00000574318 CRIPAKQ8N1N5 446 aa9.33□□□□□ -0.92
TOM1L1-217ENST00000574318 EIF2AK4Q9P2K8 1649 aaKnown RBP9.33□□□□□ -0.92
TOM1L1-217ENST00000574318 MED14O60244 1454 aa9.33□□□□□ -0.92
TOM1L1-217ENST00000574318 UGGT1Q9NYU2 1555 aa9.33□□□□□ -0.92
TOM1L1-217ENST00000574318 NPHP4O75161 1426 aaPredicted RBP9.32□□□□□ -0.92
TOM1L1-217ENST00000574318 ARHGAP31Q2M1Z3 1444 aa9.32□□□□□ -0.92
TOM1L1-217ENST00000574318 PTPN23Q9H3S7 1636 aa9.32□□□□□ -0.92
TOM1L1-217ENST00000574318 USP17L3A6NCW0 530 aa9.32□□□□□ -0.92
TOM1L1-217ENST00000574318 USP17L4A6NCW7 530 aa9.32□□□□□ -0.92
TOM1L1-217ENST00000574318 ERVH48-1M5A8F1 160 aa9.32□□□□□ -0.92
TOM1L1-217ENST00000574318 RFX1P22670 979 aa9.32□□□□□ -0.92
TOM1L1-217ENST00000574318 PPP1R26Q5T8A7 1209 aaPredicted RBP9.32□□□□□ -0.92
TOM1L1-217ENST00000574318 USP17L2Q6R6M4 530 aa9.32□□□□□ -0.92
TOM1L1-217ENST00000574318 USP17L1Q7RTZ2 530 aa9.32□□□□□ -0.92
TOM1L1-217ENST00000574318 PGPEP1Q9NXJ5 209 aa9.32□□□□□ -0.92
TOM1L1-217ENST00000574318 ACIN1Q9UKV3 1341 aaKnown RBP9.31□□□□□ -0.92
TOM1L1-217ENST00000574318 TIMP2P16035 220 aa9.31□□□□□ -0.92
TOM1L1-217ENST00000574318 CCDC85AQ96PX6 553 aaPredicted RBP9.31□□□□□ -0.92
TOM1L1-217ENST00000574318 PRDM15P57071 1507 aaPredicted RBP9.31□□□□□ -0.92
TOM1L1-217ENST00000574318 VWDEQ8N2E2 1590 aa9.3□□□□□ -0.92
TOM1L1-217ENST00000574318 ANKRD30AQ9BXX3 1397 aa9.3□□□□□ -0.92
TOM1L1-217ENST00000574318 DISP3Q9P2K9 1392 aa9.3□□□□□ -0.92
TOM1L1-217ENST00000574318 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.3□□□□□ -0.92
TOM1L1-217ENST00000574318 WDR4P57081 412 aaKnown RBP9.3□□□□□ -0.92
TOM1L1-217ENST00000574318 DOLKQ9UPQ8 538 aa9.3□□□□□ -0.92
TOM1L1-217ENST00000574318 ZC3H13Q5T200 1668 aaKnown RBP9.29□□□□□ -0.92
TOM1L1-217ENST00000574318 ATG7O95352 703 aa9.29□□□□□ -0.92
TOM1L1-217ENST00000574318 ZIC2O95409 532 aaPredicted RBP9.29□□□□□ -0.92
TOM1L1-217ENST00000574318 LTKP29376 864 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms