RNA–Protein interactions for RNA: ENST00000573395.1

RAB40B-208, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-208ENST00000573395 PXDNLA1KZ92 1463 aa21.66■■□□□ 1.06
RAB40B-208ENST00000573395 CEMIPQ8WUJ3 1361 aa21.66■■□□□ 1.06
RAB40B-208ENST00000573395 HEG1Q9ULI3 1381 aa21.66■■□□□ 1.06
RAB40B-208ENST00000573395 NARFQ9UHQ1 456 aa21.66■■□□□ 1.06
RAB40B-208ENST00000573395 BCS1LQ9Y276 419 aa21.66■■□□□ 1.06
RAB40B-208ENST00000573395 ZNF330Q9Y3S2 320 aaPredicted RBP21.65■■□□□ 1.06
RAB40B-208ENST00000573395 A0A087WZG4 1122 aa21.64■■□□□ 1.05
RAB40B-208ENST00000573395 DPEP1P16444 411 aa21.64■■□□□ 1.05
RAB40B-208ENST00000573395 DDR1Q08345 913 aa21.64■■□□□ 1.05
RAB40B-208ENST00000573395 MCM10Q7L590 875 aa21.64■■□□□ 1.05
RAB40B-208ENST00000573395 UBR2Q8IWV8 1755 aa21.64■■□□□ 1.05
RAB40B-208ENST00000573395 UTRNP46939 3433 aa21.62■■□□□ 1.05
RAB40B-208ENST00000573395 HTATSF1O43719 755 aaKnown RBP21.62■■□□□ 1.05
RAB40B-208ENST00000573395 GIGYF1O75420 1035 aaPredicted RBP21.62■■□□□ 1.05
RAB40B-208ENST00000573395 POLRMTO00411 1230 aaKnown RBP21.61■■□□□ 1.05
RAB40B-208ENST00000573395 TM4SF1P30408 202 aa21.61■■□□□ 1.05
RAB40B-208ENST00000573395 PNNQ9H307 717 aaKnown RBP21.61■■□□□ 1.05
RAB40B-208ENST00000573395 KIF13BQ9NQT8 1826 aa21.61■■□□□ 1.05
RAB40B-208ENST00000573395 DCTN1Q14203 1278 aa21.6■■□□□ 1.05
RAB40B-208ENST00000573395 PIM2Q9P1W9 311 aa21.6■■□□□ 1.05
RAB40B-208ENST00000573395 KCNQ3O43525 872 aa21.59■■□□□ 1.05
RAB40B-208ENST00000573395 EIF5P55010 431 aaKnown RBP21.59■■□□□ 1.05
RAB40B-208ENST00000573395 DDX10Q13206 875 aaKnown RBP21.59■■□□□ 1.05
RAB40B-208ENST00000573395 NFIXQ14938 502 aa21.59■■□□□ 1.05
RAB40B-208ENST00000573395 RALBP1Q15311 655 aa21.59■■□□□ 1.05
RAB40B-208ENST00000573395 SIPA1L3O60292 1781 aaPredicted RBP21.59■■□□□ 1.05
RAB40B-208ENST00000573395 N4BP2Q86UW6 1770 aaPredicted RBP21.59■■□□□ 1.05
RAB40B-208ENST00000573395 MAPK8IP3Q9UPT6 1336 aa21.58■■□□□ 1.05
RAB40B-208ENST00000573395 ATP10DQ9P241 1426 aa21.58■■□□□ 1.05
RAB40B-208ENST00000573395 BICDL1Q6ZP65 573 aa21.58■■□□□ 1.05
RAB40B-208ENST00000573395 ARHGAP27Q6ZUM4 889 aa21.58■■□□□ 1.05
RAB40B-208ENST00000573395 A1BGP04217 495 aa21.57■■□□□ 1.04
RAB40B-208ENST00000573395 IL6STP40189 918 aaPredicted RBP21.57■■□□□ 1.04
RAB40B-208ENST00000573395 GPBP1L1Q9HC44 474 aaPredicted RBP21.57■■□□□ 1.04
RAB40B-208ENST00000573395 SERPINB2P05120 415 aa21.56■■□□□ 1.04
RAB40B-208ENST00000573395 SNRPA1P09661 255 aaKnown RBP21.56■■□□□ 1.04
RAB40B-208ENST00000573395 C1QTNF8P60827 252 aa21.56■■□□□ 1.04
RAB40B-208ENST00000573395 TAF7Q15545 349 aaPredicted RBP21.56■■□□□ 1.04
RAB40B-208ENST00000573395 DALRD3Q5D0E6 543 aaKnown RBP21.56■■□□□ 1.04
RAB40B-208ENST00000573395 ZNF526Q8TF50 670 aaPredicted RBP21.56■■□□□ 1.04
RAB40B-208ENST00000573395 BCL2L12Q9HB09 334 aa21.56■■□□□ 1.04
RAB40B-208ENST00000573395 TBC1D2BQ9UPU7 963 aa21.56■■□□□ 1.04
RAB40B-208ENST00000573395 CHRNA5P30532 468 aa21.55■■□□□ 1.04
RAB40B-208ENST00000573395 KIAA1551Q9HCM1 1747 aa21.55■■□□□ 1.04
RAB40B-208ENST00000573395 GOLGB1Q14789 3259 aaKnown RBP21.54■■□□□ 1.04
RAB40B-208ENST00000573395 USP16Q9Y5T5 823 aa21.54■■□□□ 1.04
RAB40B-208ENST00000573395 NPHP1O15259 732 aa21.53■■□□□ 1.04
RAB40B-208ENST00000573395 KCNA3P22001 575 aa21.53■■□□□ 1.04
RAB40B-208ENST00000573395 NFE2L2Q16236 605 aa21.53■■□□□ 1.04
RAB40B-208ENST00000573395 PNISRQ8TF01 805 aaKnown RBP21.52■■□□□ 1.04
RAB40B-208ENST00000573395 PLEKHF1Q96S99 279 aa21.52■■□□□ 1.04
RAB40B-208ENST00000573395 ADCY9O60503 1353 aa21.51■■□□□ 1.03
RAB40B-208ENST00000573395 TBC1D9BQ66K14 1250 aa21.51■■□□□ 1.03
RAB40B-208ENST00000573395 DZIP3Q86Y13 1208 aaKnown RBP21.51■■□□□ 1.03
RAB40B-208ENST00000573395 MIS18AQ9NYP9 233 aa21.51■■□□□ 1.03
RAB40B-208ENST00000573395 PRAMEF22A3QJZ6 481 aa21.5■■□□□ 1.03
RAB40B-208ENST00000573395 PIP4K2AP48426 406 aaPredicted RBP21.5■■□□□ 1.03
RAB40B-208ENST00000573395 MYBBP1AQ9BQG0 1328 aaKnown RBP21.5■■□□□ 1.03
RAB40B-208ENST00000573395 SENP3-EIF4A1A0A087X0R7 540 aa21.49■■□□□ 1.03
RAB40B-208ENST00000573395 SETDB2Q96T68 719 aa21.49■■□□□ 1.03
RAB40B-208ENST00000573395 CARMIL3Q8ND23 1372 aa21.48■■□□□ 1.03
RAB40B-208ENST00000573395 H0YIN7 160 aa21.48■■□□□ 1.03
RAB40B-208ENST00000573395 C2CD5Q86YS7 1000 aa21.48■■□□□ 1.03
RAB40B-208ENST00000573395 ZNF652Q9Y2D9 606 aa21.48■■□□□ 1.03
RAB40B-208ENST00000573395 CAMTA2O94983 1202 aa21.47■■□□□ 1.03
RAB40B-208ENST00000573395 THUMPD2Q9BTF0 503 aaKnown RBP21.46■■□□□ 1.03
RAB40B-208ENST00000573395 SCN7AQ01118 1682 aa21.46■■□□□ 1.03
RAB40B-208ENST00000573395 PDE6BP35913 854 aa21.45■■□□□ 1.02
RAB40B-208ENST00000573395 WDR43Q15061 677 aaKnown RBP eCLIP21.45■■□□□ 1.02
RAB40B-208ENST00000573395 TTLL6Q8N841 843 aa21.45■■□□□ 1.02
RAB40B-208ENST00000573395 CNBD1Q8NA66 436 aa21.45■■□□□ 1.02
RAB40B-208ENST00000573395 AFDNP55196 1824 aaKnown RBP21.45■■□□□ 1.02
RAB40B-208ENST00000573395 BRCA1P38398 1863 aaKnown RBP21.45■■□□□ 1.02
RAB40B-208ENST00000573395 NRXN2Q9P2S2 1712 aa21.44■■□□□ 1.02
RAB40B-208ENST00000573395 RIPK4P57078 832 aa21.44■■□□□ 1.02
RAB40B-208ENST00000573395 ST5P78524 1137 aa21.44■■□□□ 1.02
RAB40B-208ENST00000573395 C9orf131Q5VYM1 1079 aa21.44■■□□□ 1.02
RAB40B-208ENST00000573395 PDZRN3Q9UPQ7 1066 aa21.44■■□□□ 1.02
RAB40B-208ENST00000573395 LMOD3Q0VAK6 560 aa21.43■■□□□ 1.02
RAB40B-208ENST00000573395 PRR5LQ6MZQ0 368 aa21.43■■□□□ 1.02
RAB40B-208ENST00000573395 CLEC4GQ6UXB4 293 aa21.43■■□□□ 1.02
RAB40B-208ENST00000573395 CCDC24Q8N4L8 307 aa21.43■■□□□ 1.02
RAB40B-208ENST00000573395 ZNF622Q969S3 477 aaKnown RBP eCLIP21.43■■□□□ 1.02
RAB40B-208ENST00000573395 BRIP1Q9BX63 1249 aa21.43■■□□□ 1.02
RAB40B-208ENST00000573395 ARFGEF1Q9Y6D6 1849 aa21.43■■□□□ 1.02
RAB40B-208ENST00000573395 DLG5Q8TDM6 1919 aa21.42■■□□□ 1.02
RAB40B-208ENST00000573395 RNF181Q9P0P0 153 aa21.42■■□□□ 1.02
RAB40B-208ENST00000573395 NBPF26B4DH59 902 aa21.41■■□□□ 1.02
RAB40B-208ENST00000573395 EIF4A1P60842 406 aaKnown RBP21.41■■□□□ 1.02
RAB40B-208ENST00000573395 NBPF10Q6P3W6 841 aaKnown RBP21.41■■□□□ 1.02
RAB40B-208ENST00000573395 NBPF5PQ86XG9 351 aaPredicted RBP21.41■■□□□ 1.02
RAB40B-208ENST00000573395 NBPF15Q8N660 670 aa21.41■■□□□ 1.02
RAB40B-208ENST00000573395 TSPYL4Q9UJ04 414 aa21.41■■□□□ 1.02
RAB40B-208ENST00000573395 NGEFQ8N5V2 710 aa21.4■■□□□ 1.02
RAB40B-208ENST00000573395 TMPOP42166 694 aaKnown RBP21.39■■□□□ 1.01
RAB40B-208ENST00000573395 NEUROD2Q15784 382 aa21.39■■□□□ 1.01
RAB40B-208ENST00000573395 CCDC146Q8IYE0 955 aa21.39■■□□□ 1.01
RAB40B-208ENST00000573395 NIP7Q9Y221 180 aaKnown RBP eCLIP21.39■■□□□ 1.01
RAB40B-208ENST00000573395 RRP7AQ9Y3A4 280 aaKnown RBP21.39■■□□□ 1.01
RAB40B-208ENST00000573395 RGL2O15211 777 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms