RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 DCTN1Q14203 1278 aa23.13■■□□□ 1.29
SMG6-212ENST00000573153 MCM10Q7L590 875 aa23.13■■□□□ 1.29
SMG6-212ENST00000573153 SCN7AQ01118 1682 aa23.13■■□□□ 1.29
SMG6-212ENST00000573153 TM4SF1P30408 202 aa23.12■■□□□ 1.29
SMG6-212ENST00000573153 DDX10Q13206 875 aaKnown RBP23.12■■□□□ 1.29
SMG6-212ENST00000573153 EIF5P55010 431 aaKnown RBP23.11■■□□□ 1.29
SMG6-212ENST00000573153 PELP1Q8IZL8 1130 aaKnown RBP23.11■■□□□ 1.29
SMG6-212ENST00000573153 POLRMTO00411 1230 aaKnown RBP23.1■■□□□ 1.29
SMG6-212ENST00000573153 USPL1Q5W0Q7 1092 aa23.1■■□□□ 1.29
SMG6-212ENST00000573153 NARFQ9UHQ1 456 aa23.1■■□□□ 1.29
SMG6-212ENST00000573153 KDM3BQ7LBC6 1761 aa23.09■■□□□ 1.29
SMG6-212ENST00000573153 HTATSF1O43719 755 aaKnown RBP23.09■■□□□ 1.29
SMG6-212ENST00000573153 RALBP1Q15311 655 aa23.09■■□□□ 1.29
SMG6-212ENST00000573153 TTC5Q8N0Z6 440 aa23.09■■□□□ 1.29
SMG6-212ENST00000573153 AFDNP55196 1824 aaKnown RBP23.09■■□□□ 1.29
SMG6-212ENST00000573153 PRAMEF22A3QJZ6 481 aa23.08■■□□□ 1.29
SMG6-212ENST00000573153 KCNA3P22001 575 aa23.08■■□□□ 1.29
SMG6-212ENST00000573153 ADCY9O60503 1353 aa23.08■■□□□ 1.29
SMG6-212ENST00000573153 BTBD11A6QL63 1104 aa23.07■■□□□ 1.28
SMG6-212ENST00000573153 GRIN3BO60391 1043 aa23.07■■□□□ 1.28
SMG6-212ENST00000573153 WWC3Q9ULE0 1092 aa23.07■■□□□ 1.28
SMG6-212ENST00000573153 BCORQ6W2J9 1755 aa23.06■■□□□ 1.28
SMG6-212ENST00000573153 TGFB2P61812 414 aa23.06■■□□□ 1.28
SMG6-212ENST00000573153 FMNL2Q96PY5 1086 aa23.06■■□□□ 1.28
SMG6-212ENST00000573153 CANXP27824 592 aaKnown RBP23.05■■□□□ 1.28
SMG6-212ENST00000573153 NFIXQ14938 502 aa23.05■■□□□ 1.28
SMG6-212ENST00000573153 USP16Q9Y5T5 823 aa23.05■■□□□ 1.28
SMG6-212ENST00000573153 PARP3Q9Y6F1 533 aa23.05■■□□□ 1.28
SMG6-212ENST00000573153 A0A0G2JLW4 131 aa23.04■■□□□ 1.28
SMG6-212ENST00000573153 DPEP1P16444 411 aa23.04■■□□□ 1.28
SMG6-212ENST00000573153 STARD3NLO95772 234 aa23.03■■□□□ 1.28
SMG6-212ENST00000573153 A1BGP04217 495 aa23.03■■□□□ 1.28
SMG6-212ENST00000573153 ZEB1P37275 1124 aaPredicted RBP23.03■■□□□ 1.28
SMG6-212ENST00000573153 NFE2L2Q16236 605 aa23.03■■□□□ 1.28
SMG6-212ENST00000573153 LAMB4A4D0S4 1761 aa23.03■■□□□ 1.28
SMG6-212ENST00000573153 MYBBP1AQ9BQG0 1328 aaKnown RBP23.03■■□□□ 1.28
SMG6-212ENST00000573153 IL6STP40189 918 aaPredicted RBP23.02■■□□□ 1.28
SMG6-212ENST00000573153 TEX13AQ9BXU3 409 aaPredicted RBP23.02■■□□□ 1.28
SMG6-212ENST00000573153 CARMIL3Q8ND23 1372 aa23.01■■□□□ 1.27
SMG6-212ENST00000573153 ZPR1O75312 459 aa23.01■■□□□ 1.27
SMG6-212ENST00000573153 RTF1Q92541 710 aaKnown RBP23.01■■□□□ 1.27
SMG6-212ENST00000573153 THUMPD2Q9BTF0 503 aaKnown RBP23.01■■□□□ 1.27
SMG6-212ENST00000573153 DLEC1Q9Y238 1755 aa23.01■■□□□ 1.27
SMG6-212ENST00000573153 ARFGEF1Q9Y6D6 1849 aa23.01■■□□□ 1.27
SMG6-212ENST00000573153 ANKRD31Q8N7Z5 1873 aa22.99■■□□□ 1.27
SMG6-212ENST00000573153 NBPF26B4DH59 902 aa22.99■■□□□ 1.27
SMG6-212ENST00000573153 TAF7Q15545 349 aaPredicted RBP22.99■■□□□ 1.27
SMG6-212ENST00000573153 NBPF10Q6P3W6 841 aaKnown RBP22.99■■□□□ 1.27
SMG6-212ENST00000573153 NBPF15Q8N660 670 aa22.99■■□□□ 1.27
SMG6-212ENST00000573153 MIS18AQ9NYP9 233 aa22.99■■□□□ 1.27
SMG6-212ENST00000573153 CAMTA2O94983 1202 aa22.98■■□□□ 1.27
SMG6-212ENST00000573153 PIP4K2AP48426 406 aaPredicted RBP22.98■■□□□ 1.27
SMG6-212ENST00000573153 TBC1D9BQ66K14 1250 aa22.97■■□□□ 1.27
SMG6-212ENST00000573153 PRKRIP1Q9H875 184 aaPredicted RBP22.97■■□□□ 1.27
SMG6-212ENST00000573153 TBC1D2BQ9UPU7 963 aa22.97■■□□□ 1.27
SMG6-212ENST00000573153 ATP10DQ9P241 1426 aa22.97■■□□□ 1.27
SMG6-212ENST00000573153 SNRPA1P09661 255 aaKnown RBP22.96■■□□□ 1.27
SMG6-212ENST00000573153 CHRNA5P30532 468 aa22.96■■□□□ 1.27
SMG6-212ENST00000573153 A0A087WZG4 1122 aa22.95■■□□□ 1.26
SMG6-212ENST00000573153 SERPINB2P05120 415 aa22.95■■□□□ 1.26
SMG6-212ENST00000573153 COL11A2P13942 1736 aaPredicted RBP22.95■■□□□ 1.26
SMG6-212ENST00000573153 BCS1LQ9Y276 419 aa22.94■■□□□ 1.26
SMG6-212ENST00000573153 EIF4A1P60842 406 aaKnown RBP22.93■■□□□ 1.26
SMG6-212ENST00000573153 TMPOP42166 694 aaKnown RBP22.92■■□□□ 1.26
SMG6-212ENST00000573153 GIGYF1O75420 1035 aaPredicted RBP22.91■■□□□ 1.26
SMG6-212ENST00000573153 PNNQ9H307 717 aaKnown RBP22.91■■□□□ 1.26
SMG6-212ENST00000573153 MAPK8IP3Q9UPT6 1336 aa22.9■■□□□ 1.26
SMG6-212ENST00000573153 DZIP3Q86Y13 1208 aaKnown RBP22.9■■□□□ 1.26
SMG6-212ENST00000573153 PRR5LQ6MZQ0 368 aa22.89■■□□□ 1.25
SMG6-212ENST00000573153 BICDL1Q6ZP65 573 aa22.89■■□□□ 1.25
SMG6-212ENST00000573153 PNISRQ8TF01 805 aaKnown RBP22.89■■□□□ 1.25
SMG6-212ENST00000573153 PIM2Q9P1W9 311 aa22.89■■□□□ 1.25
SMG6-212ENST00000573153 ZNF330Q9Y3S2 320 aaPredicted RBP22.89■■□□□ 1.25
SMG6-212ENST00000573153 NEFMP07197 916 aa22.88■■□□□ 1.25
SMG6-212ENST00000573153 RIPK4P57078 832 aa22.87■■□□□ 1.25
SMG6-212ENST00000573153 LRP10Q7Z4F1 713 aa22.87■■□□□ 1.25
SMG6-212ENST00000573153 CCDC146Q8IYE0 955 aa22.87■■□□□ 1.25
SMG6-212ENST00000573153 ADAMTS8Q9UP79 889 aa22.87■■□□□ 1.25
SMG6-212ENST00000573153 TRIM35Q9UPQ4 493 aa22.87■■□□□ 1.25
SMG6-212ENST00000573153 RRP7AQ9Y3A4 280 aaKnown RBP22.86■■□□□ 1.25
SMG6-212ENST00000573153 RGL2O15211 777 aa22.85■■□□□ 1.25
SMG6-212ENST00000573153 DALRD3Q5D0E6 543 aaKnown RBP22.85■■□□□ 1.25
SMG6-212ENST00000573153 PRELPP51888 382 aa22.84■■□□□ 1.25
SMG6-212ENST00000573153 CLEC4GQ6UXB4 293 aa22.84■■□□□ 1.25
SMG6-212ENST00000573153 CCDC24Q8N4L8 307 aa22.84■■□□□ 1.25
SMG6-212ENST00000573153 SBF1O95248 1867 aa22.83■■□□□ 1.25
SMG6-212ENST00000573153 HLFQ16534 295 aa22.83■■□□□ 1.25
SMG6-212ENST00000573153 RUNDC1Q96C34 613 aa22.83■■□□□ 1.25
SMG6-212ENST00000573153 C1QTNF8P60827 252 aa22.82■■□□□ 1.24
SMG6-212ENST00000573153 PDIA6Q15084 440 aa22.82■■□□□ 1.24
SMG6-212ENST00000573153 CCDC184Q52MB2 194 aa22.81■■□□□ 1.24
SMG6-212ENST00000573153 ARHGAP27Q6ZUM4 889 aa22.81■■□□□ 1.24
SMG6-212ENST00000573153 C2CD5Q86YS7 1000 aa22.81■■□□□ 1.24
SMG6-212ENST00000573153 BRIP1Q9BX63 1249 aa22.81■■□□□ 1.24
SMG6-212ENST00000573153 BABAM1Q9NWV8 329 aa22.81■■□□□ 1.24
SMG6-212ENST00000573153 TNRC6CQ9HCJ0 1690 aaKnown RBP22.81■■□□□ 1.24
SMG6-212ENST00000573153 TSPYL4Q9UJ04 414 aa22.8■■□□□ 1.24
SMG6-212ENST00000573153 ARFGEF2Q9Y6D5 1785 aa22.8■■□□□ 1.24
SMG6-212ENST00000573153 NUP98P52948 1817 aa22.8■■□□□ 1.24
SMG6-212ENST00000573153 CHL1O00533 1208 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms