RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 NFIXQ14938 502 aa13.38□□□□□ -0.27
TRAPPC1-205ENST00000572656 MTHFSDQ2M296 383 aaKnown RBP13.38□□□□□ -0.27
TRAPPC1-205ENST00000572656 KIF7Q2M1P5 1343 aa13.38□□□□□ -0.27
TRAPPC1-205ENST00000572656 COL15A1P39059 1388 aa13.37□□□□□ -0.27
TRAPPC1-205ENST00000572656 PER1O15534 1290 aaPredicted RBP13.37□□□□□ -0.27
TRAPPC1-205ENST00000572656 FSTL1Q12841 308 aa13.37□□□□□ -0.27
TRAPPC1-205ENST00000572656 ZBTB1Q9Y2K1 713 aa13.37□□□□□ -0.27
TRAPPC1-205ENST00000572656 KCPQ6ZWJ8 1503 aa13.36□□□□□ -0.27
TRAPPC1-205ENST00000572656 BCL2L12Q9HB09 334 aa13.36□□□□□ -0.27
TRAPPC1-205ENST00000572656 RRAGCQ9HB90 399 aa13.36□□□□□ -0.27
TRAPPC1-205ENST00000572656 ADAMTS7Q9UKP4 1686 aa13.35□□□□□ -0.27
TRAPPC1-205ENST00000572656 STARD3NLO95772 234 aa13.35□□□□□ -0.27
TRAPPC1-205ENST00000572656 SERPINB2P05120 415 aa13.35□□□□□ -0.27
TRAPPC1-205ENST00000572656 ZC3H4Q9UPT8 1303 aaKnown RBP13.35□□□□□ -0.27
TRAPPC1-205ENST00000572656 BRCA1P38398 1863 aaKnown RBP13.34□□□□□ -0.27
TRAPPC1-205ENST00000572656 A0A087WZG4 1122 aa13.34□□□□□ -0.27
TRAPPC1-205ENST00000572656 CANXP27824 592 aaKnown RBP13.34□□□□□ -0.27
TRAPPC1-205ENST00000572656 CC2D1BQ5T0F9 858 aaKnown RBP13.34□□□□□ -0.27
TRAPPC1-205ENST00000572656 TTC5Q8N0Z6 440 aa13.34□□□□□ -0.27
TRAPPC1-205ENST00000572656 TTLL6Q8N841 843 aa13.34□□□□□ -0.27
TRAPPC1-205ENST00000572656 SCN11AQ9UI33 1791 aa13.34□□□□□ -0.27
TRAPPC1-205ENST00000572656 LMNB1P20700 586 aa13.33□□□□□ -0.28
TRAPPC1-205ENST00000572656 EIF5P55010 431 aaKnown RBP13.33□□□□□ -0.28
TRAPPC1-205ENST00000572656 RASSF7Q02833 373 aa13.33□□□□□ -0.28
TRAPPC1-205ENST00000572656 C2CD5Q86YS7 1000 aa13.33□□□□□ -0.28
TRAPPC1-205ENST00000572656 ARFGEF1Q9Y6D6 1849 aa13.32□□□□□ -0.28
TRAPPC1-205ENST00000572656 H0YIN7 160 aa13.32□□□□□ -0.28
TRAPPC1-205ENST00000572656 KLRG1Q96E93 195 aa13.32□□□□□ -0.28
TRAPPC1-205ENST00000572656 TEX13AQ9BXU3 409 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC1-205ENST00000572656 GLTPD2A6NH11 291 aa13.31□□□□□ -0.28
TRAPPC1-205ENST00000572656 GNAT3A8MTJ3 354 aa13.31□□□□□ -0.28
TRAPPC1-205ENST00000572656 PRELPP51888 382 aa13.31□□□□□ -0.28
TRAPPC1-205ENST00000572656 HTRA3P83110 453 aa13.31□□□□□ -0.28
TRAPPC1-205ENST00000572656 TEFQ10587 303 aa13.31□□□□□ -0.28
TRAPPC1-205ENST00000572656 ZNF790Q6PG37 636 aa13.31□□□□□ -0.28
TRAPPC1-205ENST00000572656 BICDL1Q6ZP65 573 aa13.31□□□□□ -0.28
TRAPPC1-205ENST00000572656 SMC1BQ8NDV3 1235 aa13.31□□□□□ -0.28
TRAPPC1-205ENST00000572656 IL17REQ8NFR9 667 aa13.31□□□□□ -0.28
TRAPPC1-205ENST00000572656 GAS2L2Q8NHY3 880 aa13.31□□□□□ -0.28
TRAPPC1-205ENST00000572656 ZNF496Q96IT1 587 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC1-205ENST00000572656 U2SURPO15042 1029 aaKnown RBP13.3□□□□□ -0.28
TRAPPC1-205ENST00000572656 JMYQ8N9B5 988 aa13.3□□□□□ -0.28
TRAPPC1-205ENST00000572656 PDZRN3Q9UPQ7 1066 aa13.3□□□□□ -0.28
TRAPPC1-205ENST00000572656 CARMIL3Q8ND23 1372 aa13.3□□□□□ -0.28
TRAPPC1-205ENST00000572656 NPC1L1Q9UHC9 1359 aa13.3□□□□□ -0.28
TRAPPC1-205ENST00000572656 HEG1Q9ULI3 1381 aa13.3□□□□□ -0.28
TRAPPC1-205ENST00000572656 NFKBIEO00221 500 aa13.29□□□□□ -0.28
TRAPPC1-205ENST00000572656 VEGFAP15692 232 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC1-205ENST00000572656 PDE6BP35913 854 aa13.29□□□□□ -0.28
TRAPPC1-205ENST00000572656 TBC1D9BQ66K14 1250 aa13.29□□□□□ -0.28
TRAPPC1-205ENST00000572656 BRIP1Q9BX63 1249 aa13.29□□□□□ -0.28
TRAPPC1-205ENST00000572656 NRXN2Q9P2S2 1712 aa13.28□□□□□ -0.28
TRAPPC1-205ENST00000572656 IL6STP40189 918 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC1-205ENST00000572656 FMNL2Q96PY5 1086 aa13.28□□□□□ -0.28
TRAPPC1-205ENST00000572656 TBC1D2BQ9UPU7 963 aa13.28□□□□□ -0.28
TRAPPC1-205ENST00000572656 COL3A1P02461 1466 aaPredicted RBP13.28□□□□□ -0.28
TRAPPC1-205ENST00000572656 PRR5LQ6MZQ0 368 aa13.27□□□□□ -0.29
TRAPPC1-205ENST00000572656 ZNF622Q969S3 477 aaKnown RBP eCLIP13.27□□□□□ -0.29
TRAPPC1-205ENST00000572656 ZNF330Q9Y3S2 320 aaPredicted RBP13.27□□□□□ -0.29
TRAPPC1-205ENST00000572656 A1BGP04217 495 aa13.26□□□□□ -0.29
TRAPPC1-205ENST00000572656 CNGB1Q14028 1251 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC1-205ENST00000572656 NPM2Q86SE8 214 aaKnown RBP13.26□□□□□ -0.29
TRAPPC1-205ENST00000572656 CEMIPQ8WUJ3 1361 aa13.26□□□□□ -0.29
TRAPPC1-205ENST00000572656 WDR90Q96KV7 1748 aa13.26□□□□□ -0.29
TRAPPC1-205ENST00000572656 SETDB2Q96T68 719 aa13.26□□□□□ -0.29
TRAPPC1-205ENST00000572656 TNRC6CQ9HCJ0 1690 aaKnown RBP13.25□□□□□ -0.29
TRAPPC1-205ENST00000572656 C21orf2O43822 256 aa13.25□□□□□ -0.29
TRAPPC1-205ENST00000572656 CAMTA2O94983 1202 aa13.25□□□□□ -0.29
TRAPPC1-205ENST00000572656 DPY19L2Q6NUT2 758 aa13.25□□□□□ -0.29
TRAPPC1-205ENST00000572656 PHACTR3Q96KR7 559 aa13.25□□□□□ -0.29
TRAPPC1-205ENST00000572656 UBR2Q8IWV8 1755 aa13.25□□□□□ -0.29
TRAPPC1-205ENST00000572656 BTBD11A6QL63 1104 aa13.24□□□□□ -0.29
TRAPPC1-205ENST00000572656 POTECB2RU33 542 aa13.24□□□□□ -0.29
TRAPPC1-205ENST00000572656 KCNQ3O43525 872 aa13.24□□□□□ -0.29
TRAPPC1-205ENST00000572656 CCDC24Q8N4L8 307 aa13.24□□□□□ -0.29
TRAPPC1-205ENST00000572656 CNBD1Q8NA66 436 aa13.24□□□□□ -0.29
TRAPPC1-205ENST00000572656 CNKSR1Q969H4 720 aa13.24□□□□□ -0.29
TRAPPC1-205ENST00000572656 ZNF219Q9P2Y4 722 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC1-205ENST00000572656 AFDNP55196 1824 aaKnown RBP13.23□□□□□ -0.29
TRAPPC1-205ENST00000572656 LTBP3Q9NS15 1303 aa13.23□□□□□ -0.29
TRAPPC1-205ENST00000572656 PRKAR2BP31323 418 aa13.23□□□□□ -0.29
TRAPPC1-205ENST00000572656 ST5P78524 1137 aa13.23□□□□□ -0.29
TRAPPC1-205ENST00000572656 ERFEQ4G0M1 354 aa13.23□□□□□ -0.29
TRAPPC1-205ENST00000572656 STYK1Q6J9G0 422 aa13.23□□□□□ -0.29
TRAPPC1-205ENST00000572656 CFAP53Q96M91 514 aa13.23□□□□□ -0.29
TRAPPC1-205ENST00000572656 RSPH6AQ9H0K4 717 aa13.23□□□□□ -0.29
TRAPPC1-205ENST00000572656 NPHP1O15259 732 aa13.22□□□□□ -0.29
TRAPPC1-205ENST00000572656 SRGNP10124 158 aa13.22□□□□□ -0.29
TRAPPC1-205ENST00000572656 COL13A1Q5TAT6 717 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC1-205ENST00000572656 DZIP3Q86Y13 1208 aaKnown RBP13.22□□□□□ -0.29
TRAPPC1-205ENST00000572656 TAOK3Q9H2K8 898 aa13.22□□□□□ -0.29
TRAPPC1-205ENST00000572656 USP16Q9Y5T5 823 aa13.22□□□□□ -0.29
TRAPPC1-205ENST00000572656 DLEC1Q9Y238 1755 aa13.22□□□□□ -0.29
TRAPPC1-205ENST00000572656 SBF1O95248 1867 aa13.21□□□□□ -0.29
TRAPPC1-205ENST00000572656 SOGA3Q5TF21 947 aa13.21□□□□□ -0.29
TRAPPC1-205ENST00000572656 PRPF40BQ6NWY9 871 aaKnown RBP13.21□□□□□ -0.29
TRAPPC1-205ENST00000572656 CLEC4GQ6UXB4 293 aa13.21□□□□□ -0.29
TRAPPC1-205ENST00000572656 MASTLQ96GX5 879 aa13.21□□□□□ -0.29
TRAPPC1-205ENST00000572656 NUDCQ9Y266 331 aa13.21□□□□□ -0.29
TRAPPC1-205ENST00000572656 SNRPA1P09661 255 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms